FFCP PHASE1:Hg19::chr5:14145555..14145567,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:14145555..14145567,- | |||
|coexpression_cluster_id=C502 | |coexpression_cluster_id=C502 | ||
|description=CAGE_peak_at_chr5:14145555..14145567,- | |description=CAGE_peak_at_chr5:14145555..14145567,- | ||
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|ontology_enrichment_celltype=CL:0000055!5.24e-12!180;CL:0002620!6.95e-09!23;CL:0000057!4.43e-07!75 | |ontology_enrichment_celltype=CL:0000055!5.24e-12!180;CL:0002620!6.95e-09!23;CL:0000057!4.43e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002262;1.38e-09;2!CL:1000398;1.38e-09;2!CL:0002620;4.63e-07;23!CL:0000346;8.38e-07;3!CL:1000428;8.38e-07;3!CL:0000632;8.38e-07;3 | |ontology_enrichment_celltype_v019=CL:0002262;1.38e-09;2!CL:1000398;1.38e-09;2!CL:0002620;4.63e-07;23!CL:0000346;8.38e-07;3!CL:1000428;8.38e-07;3!CL:0000632;8.38e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002262,1.22e-09,2;CL:1000398,1.22e-09,2;CL:0002620,5.31e-07,23;CL:0000632,6.88e-07,3;CL:0000346,7.28e-07,3;CL:1000428,7.28e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2513;8.01e-18;1!DOID:3571;8.01e-18;1!DOID:4231;1.38e-09;2!DOID:3451;1.38e-09;2!DOID:4159;1.38e-09;2!DOID:0060122;1.38e-09;2!DOID:3350;1.38e-09;2!DOID:1907;1.38e-09;2!DOID:1115;4.25e-08;20 | |ontology_enrichment_disease_v019=DOID:2513;8.01e-18;1!DOID:3571;8.01e-18;1!DOID:4231;1.38e-09;2!DOID:3451;1.38e-09;2!DOID:4159;1.38e-09;2!DOID:0060122;1.38e-09;2!DOID:3350;1.38e-09;2!DOID:1907;1.38e-09;2!DOID:1115;4.25e-08;20 | ||
|ontology_enrichment_disease_v019_2=DOID:3571,4.44e-18,1;DOID:2513,7.37e-18,1;DOID:3350,1.03e-09,2;DOID:3451,1.33e-09,2;DOID:4159,1.33e-09,2;DOID:0060122,1.33e-09,2;DOID:4231,1.44e-09,2;DOID:1907,1.44e-09,2;DOID:1115,4.80e-08,20 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.98e-07!45;UBERON:0002416!1.98e-07!45;UBERON:0002097!4.16e-07!40;UBERON:0001280!5.44e-07!4;UBERON:0004647!5.44e-07!4 | |ontology_enrichment_uberon=UBERON:0002199!1.98e-07!45;UBERON:0002416!1.98e-07!45;UBERON:0002097!4.16e-07!40;UBERON:0001280!5.44e-07!4;UBERON:0004647!5.44e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;5.07e-10;41!UBERON:0001281;1.38e-09;2!UBERON:0003497;1.38e-09;2!UBERON:0003909;1.38e-09;2!UBERON:0003835;1.38e-09;2!UBERON:0002199;3.52e-08;46!UBERON:0002416;3.52e-08;46!UBERON:0000412;8.38e-07;3!UBERON:0001992;8.38e-07;3!UBERON:0001280;8.38e-07;3!UBERON:0004647;8.38e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002097;5.07e-10;41!UBERON:0001281;1.38e-09;2!UBERON:0003497;1.38e-09;2!UBERON:0003909;1.38e-09;2!UBERON:0003835;1.38e-09;2!UBERON:0002199;3.52e-08;46!UBERON:0002416;3.52e-08;46!UBERON:0000412;8.38e-07;3!UBERON:0001992;8.38e-07;3!UBERON:0001280;8.38e-07;3!UBERON:0004647;8.38e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.40e-10,41;UBERON:0001281,1.22e-09,2;UBERON:0003497,1.22e-09,2;UBERON:0003909,1.22e-09,2;UBERON:0003835,1.22e-09,2;UBERON:0002199,5.46e-09,46;UBERON:0002416,5.46e-09,46;UBERON:0000412,7.28e-07,3;UBERON:0001992,7.28e-07,3;UBERON:0001280,7.70e-07,3;UBERON:0004647,7.70e-07,3;UBERON:0005171,7.70e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.662045904066094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877955241761676,0.612975591598039,0,0.113432183160021,0.179389635688862,0,1.05965950579781,0,0.721367704669072,0.257640540045629,0.37223371266318,0.675105328965065,0.487185025805993,1.00973509697646,0.552299391853796,0,0.355009592516614,0.806016785821122,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.577465791044295,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.2933531432838,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.289562613335158,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0.831883446123229,1.07057393278297,0.473107245101804,0.117141414992713,0.601892199455438,0,0,0.664225598535437,0.921845842708516,0.347534457872331,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0,0,0.40101294060657,0,0,0,0,0,0.15403067420883,0,0,0.527758144464379,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0.255679882248303,0,0,0,0.127612712494584,0,0.929691098594572,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0,0.372158369359667,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0.409499734223957,0,0,0,0.66343897524122,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0.715880777515084,0,1.24415835064723,0.629078458031288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0,0.372757606696298,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,1.80149941771202,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0,3.06698439213759,0,0,0,0,0,0,0.704815022316672,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0,0.159296767163702,0,0.310525913752519,0,0,0,0.300515217994437,0.380805212168795,0,0.181848659202559,0.214821114084977,0.464033759878494,0.796191777397232,0.400027764663154,0,0,0,0.385239660814607,0,0,0,0.926089897295336,0.244736704506468,11.9989523524597,0,0,0.176689145945881,0.192914038270915,0,0.256241518587947,0.345430341731199,0,0,0,0,0,0,0.737318726261158,0,0,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.346576998451015,0.381382095467167,0,0,0,1.0085253435176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,1.8328549483524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0.640364075266293,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.662045904066094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877955241761676,0.612975591598039,0,0.113432183160021,0.179389635688862,0,1.05965950579781,0,0.721367704669072,0.257640540045629,0.37223371266318,0.675105328965065,0.487185025805993,1.00973509697646,0.552299391853796,0,0.355009592516614,0.806016785821122,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.577465791044295,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.2933531432838,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.289562613335158,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0.831883446123229,1.07057393278297,0.473107245101804,0.117141414992713,0.601892199455438,0,0,0.664225598535437,0.921845842708516,0.347534457872331,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0,0,0.40101294060657,0,0,0,0,0,0.15403067420883,0,0,0.527758144464379,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0.255679882248303,0,0,0,0.127612712494584,0,0.929691098594572,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0,0.372158369359667,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0.409499734223957,0,0,0,0.66343897524122,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0.715880777515084,0,1.24415835064723,0.629078458031288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0,0.372757606696298,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,1.80149941771202,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0,3.06698439213759,0,0,0,0,0,0,0.704815022316672,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0,0.159296767163702,0,0.310525913752519,0,0,0,0.300515217994437,0.380805212168795,0,0.181848659202559,0.214821114084977,0.464033759878494,0.796191777397232,0.400027764663154,0,0,0,0.385239660814607,0,0,0,0.926089897295336,0.244736704506468,11.9989523524597,0,0,0.176689145945881,0.192914038270915,0,0.256241518587947,0.345430341731199,0,0,0,0,0,0,0.737318726261158,0,0,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.346576998451015,0.381382095467167,0,0,0,1.0085253435176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,1.8328549483524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0.640364075266293,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:14145555..14145567,- | |short_description=p@chr5:14145555..14145567,- | ||
}} | }} |
Latest revision as of 10:47, 30 July 2015
Short description: | p@chr5:14145555..14145567, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:14145555..14145567, - |
Coexpression cluster: | C502_mesothelioma_Basophils_liposarcoma_Olfactory_Fibroblast_mesenchymal_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 1.22e-09 | 2 |
endothelial cell of hepatic sinusoid | 1.22e-09 | 2 |
skin fibroblast | 5.31e-07 | 23 |
hepatic stellate cell | 6.88e-07 | 3 |
hair follicle dermal papilla cell | 7.28e-07 | 3 |
stem cell of epidermis | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.40e-10 | 41 |
hepatic sinusoid | 1.22e-09 | 2 |
abdomen blood vessel | 1.22e-09 | 2 |
sinusoid | 1.22e-09 | 2 |
abdominal segment blood vessel | 1.22e-09 | 2 |
integument | 5.46e-09 | 46 |
integumental system | 5.46e-09 | 46 |
dermal papilla | 7.28e-07 | 3 |
papillary layer of dermis | 7.28e-07 | 3 |
liver parenchyma | 7.70e-07 | 3 |
liver lobule | 7.70e-07 | 3 |
hepatic duct | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 4.44e-18 | 1 |
basal cell carcinoma | 7.37e-18 | 1 |
mesenchymal cell neoplasm | 1.03e-09 | 2 |
skin carcinoma | 1.33e-09 | 2 |
skin cancer | 1.33e-09 | 2 |
integumentary system cancer | 1.33e-09 | 2 |
histiocytoma | 1.44e-09 | 2 |
malignant fibroxanthoma | 1.44e-09 | 2 |
sarcoma | 4.80e-08 | 20 |