FFCP PHASE1:Hg19::chr2:56144905..56144921,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:56144905..56144921,- | |||
|coexpression_cluster_id=C395 | |coexpression_cluster_id=C395 | ||
|description=CAGE_peak_at_chr2:56144905..56144921,- | |description=CAGE_peak_at_chr2:56144905..56144921,- | ||
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|ontology_enrichment_celltype=CL:0000222!1.41e-19!119;CL:0002139!3.01e-15!24;CL:0000213!6.93e-14!57;CL:0000215!6.93e-14!57;CL:0000115!1.33e-11!35;CL:0002321!1.71e-11!248;CL:0000220!1.93e-11!246;CL:0002078!8.50e-11!44;CL:0000071!9.55e-10!18;CL:0002546!9.55e-10!18;CL:0000055!5.27e-09!180;CL:0000187!6.89e-08!54;CL:0000680!1.40e-07!57;CL:0000056!1.40e-07!57;CL:0000355!1.40e-07!57;CL:0005020!1.56e-07!6;CL:0002138!1.56e-07!6;CL:0005022!1.56e-07!6;CL:0000057!2.06e-07!75 | |ontology_enrichment_celltype=CL:0000222!1.41e-19!119;CL:0002139!3.01e-15!24;CL:0000213!6.93e-14!57;CL:0000215!6.93e-14!57;CL:0000115!1.33e-11!35;CL:0002321!1.71e-11!248;CL:0000220!1.93e-11!246;CL:0002078!8.50e-11!44;CL:0000071!9.55e-10!18;CL:0002546!9.55e-10!18;CL:0000055!5.27e-09!180;CL:0000187!6.89e-08!54;CL:0000680!1.40e-07!57;CL:0000056!1.40e-07!57;CL:0000355!1.40e-07!57;CL:0005020!1.56e-07!6;CL:0002138!1.56e-07!6;CL:0005022!1.56e-07!6;CL:0000057!2.06e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.68e-21;24!CL:0002138;6.96e-21;6!CL:0002078;1.83e-15;45!CL:0000115;2.14e-14;36!CL:0000213;1.46e-12;58!CL:0000215;1.46e-12;58!CL:0002579;2.88e-10;3!CL:0000153;3.85e-10;9!CL:0000447;3.85e-10;9!CL:0002494;2.81e-09;16!CL:0000071;3.13e-08;18!CL:1000306;3.40e-08;4!CL:0002547;3.40e-08;4!CL:0002617;2.14e-07;2!CL:0002593;2.14e-07;2 | |ontology_enrichment_celltype_v019=CL:0002139;2.68e-21;24!CL:0002138;6.96e-21;6!CL:0002078;1.83e-15;45!CL:0000115;2.14e-14;36!CL:0000213;1.46e-12;58!CL:0000215;1.46e-12;58!CL:0002579;2.88e-10;3!CL:0000153;3.85e-10;9!CL:0000447;3.85e-10;9!CL:0002494;2.81e-09;16!CL:0000071;3.13e-08;18!CL:1000306;3.40e-08;4!CL:0002547;3.40e-08;4!CL:0002617;2.14e-07;2!CL:0002593;2.14e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.60e-21,24;CL:0000213,6.91e-21,58;CL:0000215,6.91e-21,58;CL:0005020,8.40e-21,6;CL:0002138,8.40e-21,6;CL:0005022,8.40e-21,6;CL:0000222,1.25e-20,121;CL:0002078,1.31e-20,45;CL:0000115,4.71e-18,36;CL:0000153,3.81e-10,9;CL:0000447,3.81e-10,9;CL:0002579,5.92e-10,3;CL:0002494,3.74e-09,16;CL:0000071,2.07e-08,18;CL:0002546,2.07e-08,18;CL:1000306,2.32e-08,4;CL:0002547,2.32e-08,4;CL:0000057,2.43e-07,76;CL:0002321,3.59e-07,250;CL:0002617,3.75e-07,2;CL:0002593,4.27e-07,2 | |||
|ontology_enrichment_development_v019=CL:0005022;6.96e-21;6!CL:0002546;3.13e-08;18!CL:0000222;8.73e-07;121 | |ontology_enrichment_development_v019=CL:0005022;6.96e-21;6!CL:0002546;3.13e-08;18!CL:0000222;8.73e-07;121 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.27e-19!79;UBERON:0007798!5.27e-19!79;UBERON:0004872!3.34e-18!84;UBERON:0000055!9.64e-18!69;UBERON:0004535!9.13e-17!110;UBERON:0001009!9.16e-16!113;UBERON:0001981!1.08e-14!60;UBERON:0007500!1.08e-14!60;UBERON:0004537!1.08e-14!60;UBERON:0006965!1.08e-14!60;UBERON:0000477!1.17e-12!286;UBERON:0003914!1.79e-11!118;UBERON:0001637!2.25e-11!42;UBERON:0003509!2.25e-11!42;UBERON:0004572!2.25e-11!42;UBERON:0000490!5.10e-10!138;UBERON:0004111!5.36e-10!241;UBERON:0001986!9.55e-10!18;UBERON:0004638!9.55e-10!18;UBERON:0004852!9.55e-10!18;UBERON:0004573!5.66e-09!33;UBERON:0004571!5.66e-09!33;UBERON:0006914!3.99e-08!25;UBERON:0000483!8.89e-08!309;UBERON:0000119!1.89e-07!312;UBERON:0000487!4.52e-07!22;UBERON:0000025!5.55e-07!194;UBERON:0001134!5.61e-07!61;UBERON:0002036!5.61e-07!61;UBERON:0003082!5.61e-07!61;UBERON:0004457!7.24e-07!12;UBERON:0000042!7.24e-07!12 | |ontology_enrichment_uberon=UBERON:0002049!5.27e-19!79;UBERON:0007798!5.27e-19!79;UBERON:0004872!3.34e-18!84;UBERON:0000055!9.64e-18!69;UBERON:0004535!9.13e-17!110;UBERON:0001009!9.16e-16!113;UBERON:0001981!1.08e-14!60;UBERON:0007500!1.08e-14!60;UBERON:0004537!1.08e-14!60;UBERON:0006965!1.08e-14!60;UBERON:0000477!1.17e-12!286;UBERON:0003914!1.79e-11!118;UBERON:0001637!2.25e-11!42;UBERON:0003509!2.25e-11!42;UBERON:0004572!2.25e-11!42;UBERON:0000490!5.10e-10!138;UBERON:0004111!5.36e-10!241;UBERON:0001986!9.55e-10!18;UBERON:0004638!9.55e-10!18;UBERON:0004852!9.55e-10!18;UBERON:0004573!5.66e-09!33;UBERON:0004571!5.66e-09!33;UBERON:0006914!3.99e-08!25;UBERON:0000483!8.89e-08!309;UBERON:0000119!1.89e-07!312;UBERON:0000487!4.52e-07!22;UBERON:0000025!5.55e-07!194;UBERON:0001134!5.61e-07!61;UBERON:0002036!5.61e-07!61;UBERON:0003082!5.61e-07!61;UBERON:0004457!7.24e-07!12;UBERON:0000042!7.24e-07!12 | ||
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| ||
|short_description=p@chr2:56144905..56144921,- | |short_description=p@chr2:56144905..56144921,- | ||
}} | }} |
Latest revision as of 11:01, 29 July 2015
Short description: | p@chr2:56144905..56144921, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:56144905..56144921, - |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.60e-21 | 24 |
lining cell | 6.91e-21 | 58 |
barrier cell | 6.91e-21 | 58 |
lymphangioblast | 8.40e-21 | 6 |
endothelial cell of lymphatic vessel | 8.40e-21 | 6 |
vascular lymphangioblast | 8.40e-21 | 6 |
mesodermal cell | 1.25e-20 | 121 |
meso-epithelial cell | 1.31e-20 | 45 |
endothelial cell | 4.71e-18 | 36 |
GAG secreting cell | 3.81e-10 | 9 |
carbohydrate secreting cell | 3.81e-10 | 9 |
omentum preadipocyte | 5.92e-10 | 3 |
cardiocyte | 3.74e-09 | 16 |
blood vessel endothelial cell | 2.07e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.07e-08 | 18 |
fibroblast of tunica adventitia of artery | 2.32e-08 | 4 |
fibroblast of the aortic adventitia | 2.32e-08 | 4 |
fibroblast | 2.43e-07 | 76 |
embryonic cell | 3.59e-07 | 250 |
adipocyte of breast | 3.75e-07 | 2 |
smooth muscle cell of the internal thoracic artery | 4.27e-07 | 2 |