FFCP PHASE1:Hg19::chr22:39493235..39493261,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:39493235..39493261,+
|short_description=p2@APOBEC3H
|description=CAGE_peak_2_at_APOBEC3H_5end
|association_with_transcript=6bp_to_ENST00000348946,ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=164668 | |EntrezGene=164668 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24100 | |HGNC=24100 | ||
|TSSclassifier=strong | |||
|UniProt=E9PF38,Q6NTF7,B7TQM5,B7TQM9,B7TQM3 | |UniProt=E9PF38,Q6NTF7,B7TQM5,B7TQM9,B7TQM3 | ||
|association_with_transcript=6bp_to_ENST00000348946,ENST00000421988,ENST00000442487,NM_001166002,NM_001166003,NM_001166004,NM_181773_5end | |||
|cluster_id=chr22:39493235..39493261,+ | |||
|coexpression_cluster_id=C239 | |||
|description=CAGE_peak_2_at_APOBEC3H_5end | |||
|id=chr22:39493235..39493261,+ | |||
|ontology_enrichment_celltype=CL:0000542!8.04e-38!53;CL:0000051!8.04e-38!53;CL:0000838!4.68e-37!52;CL:0000084!2.46e-23!25;CL:0000827!2.46e-23!25;CL:0000037!2.78e-21!172;CL:0000566!2.78e-21!172;CL:0002032!3.47e-21!165;CL:0000837!3.47e-21!165;CL:0000738!3.73e-21!140;CL:0000791!8.27e-21!18;CL:0000789!8.27e-21!18;CL:0002420!8.27e-21!18;CL:0002419!8.27e-21!18;CL:0000790!8.27e-21!18;CL:0000988!1.48e-20!182;CL:0002031!6.07e-18!124;CL:0002087!4.77e-16!119;CL:0000625!1.60e-15!11;CL:0000945!5.85e-12!24;CL:0000826!5.85e-12!24 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.82e-41;25!CL:0000791;4.52e-41;18!CL:0000789;4.52e-41;18!CL:0002419;4.52e-41;18!CL:0000625;3.41e-37;11!CL:0000542;1.14e-24;53!CL:0000623;1.63e-11;3!CL:0000767;8.61e-11;3!CL:0002087;5.85e-08;104!CL:0000945;1.20e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.99e-49,52;CL:0000542,5.86e-48,53;CL:0000051,5.86e-48,53;CL:0000084,2.43e-41,25;CL:0000827,2.43e-41,25;CL:0000791,2.60e-41,18;CL:0000789,2.60e-41,18;CL:0002420,2.60e-41,18;CL:0002419,2.60e-41,18;CL:0000790,2.60e-41,18;CL:0000625,1.77e-37,11;CL:0000738,1.03e-23,136;CL:0002087,7.16e-21,115;CL:0000037,3.39e-20,168;CL:0000988,5.44e-20,177;CL:0002031,1.11e-19,120;CL:0002032,9.09e-19,161;CL:0000837,9.09e-19,161;CL:0000623,1.55e-11,3;CL:0000825,1.55e-11,3;CL:0000767,1.08e-10,3;CL:0000893,1.85e-08,2;CL:0002489,1.85e-08,2;CL:0000809,1.85e-08,2;CL:0000808,1.85e-08,2;CL:0000894,1.85e-08,2;CL:0000806,1.85e-08,2;CL:0000807,1.85e-08,2;CL:0000805,1.85e-08,2;CL:0002425,1.85e-08,2;CL:0000945,1.12e-07,24;CL:0000826,1.12e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;4.52e-41;18!CL:0000051;1.14e-24;53!CL:0002425;1.78e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!2.23e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.89e-07!15;UBERON:0000179!3.89e-07!15;UBERON:0000463!3.89e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.50e-07;15!UBERON:0000179;2.50e-07;15!UBERON:0000463;2.50e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.02e-07,15;UBERON:0000179,3.02e-07,15;UBERON:0000463,3.02e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22261449196722,1.06730766284929,1.25937250101887,1.18009283054671,4.98978217526377,1.23852898652861,0,0,0,0.697204805222715,0,0,0.553995408531877,0,0.434021741431704,0.447830948479849,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0.853460445133014,0.800791974072025,0.574752439954483,0,0,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0,0.590129310341499,0.786021525498329,1.43921049299656,6.68745981562712,0,0,0,18.2713149291685,2.06224135232386,1.77227115666897,2.70803863765016,9.09448370052294,14.0464095364669,16.4437904603676,14.64655094265,12.7513357723423,0,0,0,15.6366892922641,4.21542542962113,2.06176467289578,3.54227568827304,6.68987370080603,6.51083453856419,3.8018081777935,1.6563263098555,1.66382594500744,6.24653632761729,5.91943130110042,9.85353596305256,2.62088766192152,3.20928234940209,2.17236605824198,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.121973706129595,0,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0.858486162094873,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,1.47798971368783,1.32072651019839,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.96681151948218,3.34952292343276,3.88129634747131,4.2353201972317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0,2.24127871387233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0,1.13929437434833,0.714695326373367,0.822724546172388,0,1.08006287447623,1.58625035258854,0.320472213382419,0,0,0.185803175125719,0.28853842595289,0,0,0.199579371432817,0.766021480529467,0,0,0.280797178113459,0.912938716132769,0,0,2.70866844482565,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0,0.146508179271894,0,1.00299045849731,0,0,0,0,0,0,0,0.988823245360557,0,0,1.10513566212459,0,0.20453736500431,4.55413780205957,0,0,0,2.04628948090749,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0.987334088507493,0.108647371922008,0.31900115973192,0,1.5991043280559,3.06579894587209,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48260564340311,0.370691816839509,0,0.067401132980677,0,0,0.547364367646998,0.391329237864179,0,1.18375320854817,0,0,0.252746318513952,0.150323419414493,0.103688191397247,0,0.661983911750998,0,1.19472429772959,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27009998098677,0,0,0,0,0,0,0.77380195455795,0.0607495566580247,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,8.10207690781571,0.487170393523584,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.398594520940089,0.981392365535065,0,0,0,1.39991177098451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.294443155503077,0.11796972334774,0.183428598521679,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0,1.61327582578091,0,0,0,0,0,0,0.157115589916002,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0.437119121007915,0,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0.699588091474503,0,0.352894871715692,0,0,0.917458566809082,0.143339583151451,0,0,0,0,0,0,0,0,0,0.126698501011437,0.203977659483963,0.801652215796681,0,0.50141507858475,0.151557396436479,0,0.829169439458779,0,0,0,0.387533459016037,0,0,0,0,0,0,0.471464371102113,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0.201273793591026,3.8468219076388 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22261449196722,1.06730766284929,1.25937250101887,1.18009283054671,4.98978217526377,1.23852898652861,0,0,0,0.697204805222715,0,0,0.553995408531877,0,0.434021741431704,0.447830948479849,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0.853460445133014,0.800791974072025,0.574752439954483,0,0,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0,0.590129310341499,0.786021525498329,1.43921049299656,6.68745981562712,0,0,0,18.2713149291685,2.06224135232386,1.77227115666897,2.70803863765016,9.09448370052294,14.0464095364669,16.4437904603676,14.64655094265,12.7513357723423,0,0,0,15.6366892922641,4.21542542962113,2.06176467289578,3.54227568827304,6.68987370080603,6.51083453856419,3.8018081777935,1.6563263098555,1.66382594500744,6.24653632761729,5.91943130110042,9.85353596305256,2.62088766192152,3.20928234940209,2.17236605824198,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.121973706129595,0,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0.858486162094873,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,1.47798971368783,1.32072651019839,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.96681151948218,3.34952292343276,3.88129634747131,4.2353201972317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0,2.24127871387233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0,1.13929437434833,0.714695326373367,0.822724546172388,0,1.08006287447623,1.58625035258854,0.320472213382419,0,0,0.185803175125719,0.28853842595289,0,0,0.199579371432817,0.766021480529467,0,0,0.280797178113459,0.912938716132769,0,0,2.70866844482565,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0,0.146508179271894,0,1.00299045849731,0,0,0,0,0,0,0,0.988823245360557,0,0,1.10513566212459,0,0.20453736500431,4.55413780205957,0,0,0,2.04628948090749,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0.987334088507493,0.108647371922008,0.31900115973192,0,1.5991043280559,3.06579894587209,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48260564340311,0.370691816839509,0,0.067401132980677,0,0,0.547364367646998,0.391329237864179,0,1.18375320854817,0,0,0.252746318513952,0.150323419414493,0.103688191397247,0,0.661983911750998,0,1.19472429772959,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27009998098677,0,0,0,0,0,0,0.77380195455795,0.0607495566580247,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,8.10207690781571,0.487170393523584,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.398594520940089,0.981392365535065,0,0,0,1.39991177098451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.294443155503077,0.11796972334774,0.183428598521679,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0,1.61327582578091,0,0,0,0,0,0,0.157115589916002,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0.437119121007915,0,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0.699588091474503,0,0.352894871715692,0,0,0.917458566809082,0.143339583151451,0,0,0,0,0,0,0,0,0,0.126698501011437,0.203977659483963,0.801652215796681,0,0.50141507858475,0.151557396436479,0,0.829169439458779,0,0,0,0.387533459016037,0,0,0,0,0,0,0.471464371102113,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0.201273793591026,3.8468219076388 | ||
|short_description=p2@APOBEC3H | |||
}} | }} |
Latest revision as of 17:59, 24 September 2015
Short description: | p2@APOBEC3H |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_APOBEC3H_5end |
Coexpression cluster: | C239_CD4_lymphangiectasia_CD8_NK_mycosis_Renal_hairy |
Association with transcript: | 6bp_to_ENST00000348946, ENST00000421988, ENST00000442487, NM_001166002, NM_001166003, NM_001166004, NM_181773_5end |
EntrezGene: | APOBEC3H |
HGNC: | 24100 |
UniProt: | E9PF38Q6NTF7B7TQM5B7TQM9B7TQM3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 3.02e-07 | 15 |
haemolymphatic fluid | 3.02e-07 | 15 |
organism substance | 3.02e-07 | 15 |