FFCP PHASE1:Hg19::chr20:19982026..19982040,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:19982026..19982040,+ | |||
|coexpression_cluster_id=C1258 | |coexpression_cluster_id=C1258 | ||
|description=CAGE_peak_at_chr20:19982026..19982040,+ | |description=CAGE_peak_at_chr20:19982026..19982040,+ | ||
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|ontology_enrichment_celltype=CL:0002057!8.68e-14!42;CL:0002194!1.25e-12!63;CL:0000576!1.25e-12!63;CL:0000040!1.25e-12!63;CL:0000559!1.25e-12!63;CL:0000860!2.58e-12!45;CL:0002009!1.29e-11!65;CL:0000839!6.45e-09!70;CL:0000557!1.06e-08!71;CL:0000076!5.06e-08!62;CL:0000222!5.95e-08!119;CL:0000066!1.73e-07!254;CL:0000766!4.98e-07!76 | |ontology_enrichment_celltype=CL:0002057!8.68e-14!42;CL:0002194!1.25e-12!63;CL:0000576!1.25e-12!63;CL:0000040!1.25e-12!63;CL:0000559!1.25e-12!63;CL:0000860!2.58e-12!45;CL:0002009!1.29e-11!65;CL:0000839!6.45e-09!70;CL:0000557!1.06e-08!71;CL:0000076!5.06e-08!62;CL:0000222!5.95e-08!119;CL:0000066!1.73e-07!254;CL:0000766!4.98e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.93e-14;39!CL:0000234;3.93e-14;39!CL:0000860;7.55e-14;33!CL:0002057;7.55e-14;33!CL:0000576;1.85e-08;48 | |ontology_enrichment_celltype_v019=CL:0000473;3.93e-14;39!CL:0000234;3.93e-14;39!CL:0000860;7.55e-14;33!CL:0002057;7.55e-14;33!CL:0000576;1.85e-08;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.80e-17,48;CL:0000234,5.80e-17,48;CL:0002194,4.84e-14,59;CL:0000576,4.84e-14,59;CL:0000040,4.84e-14,59;CL:0000559,4.84e-14,59;CL:0000860,6.64e-14,42;CL:0002057,6.64e-14,42;CL:0002009,8.25e-13,61;CL:0000839,1.17e-09,66;CL:0000557,2.65e-09,67;CL:0000076,4.74e-08,63;CL:0000222,5.06e-08,121;CL:0000766,1.09e-07,72;CL:0000066,6.28e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002057;1.88e-10;42 | |ontology_enrichment_development_v019=CL:0002057;1.88e-10;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!3.30e-22!625;UBERON:0000480!5.72e-22!626;UBERON:0000468!8.48e-22!659;UBERON:0002050!2.52e-18!605;UBERON:0005423!2.52e-18!605;UBERON:0000923!3.50e-18!604;UBERON:0005291!3.50e-18!604;UBERON:0006598!3.50e-18!604;UBERON:0002532!3.50e-18!604;UBERON:0000062!6.59e-18!511;UBERON:0000922!3.20e-17!612;UBERON:0000926!2.53e-16!448;UBERON:0004120!2.53e-16!448;UBERON:0006603!2.53e-16!448;UBERON:0002204!1.25e-11!167;UBERON:0004765!9.56e-09!101;UBERON:0001434!9.56e-09!101;UBERON:0002371!1.62e-07!80;UBERON:0001474!4.06e-07!86 | |ontology_enrichment_uberon=UBERON:0000467!3.30e-22!625;UBERON:0000480!5.72e-22!626;UBERON:0000468!8.48e-22!659;UBERON:0002050!2.52e-18!605;UBERON:0005423!2.52e-18!605;UBERON:0000923!3.50e-18!604;UBERON:0005291!3.50e-18!604;UBERON:0006598!3.50e-18!604;UBERON:0002532!3.50e-18!604;UBERON:0000062!6.59e-18!511;UBERON:0000922!3.20e-17!612;UBERON:0000926!2.53e-16!448;UBERON:0004120!2.53e-16!448;UBERON:0006603!2.53e-16!448;UBERON:0002204!1.25e-11!167;UBERON:0004765!9.56e-09!101;UBERON:0001434!9.56e-09!101;UBERON:0002371!1.62e-07!80;UBERON:0001474!4.06e-07!86 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002050,1.90e-15,564;UBERON:0005423,9.06e-15,581;UBERON:0000922,2.39e-14,592;UBERON:0000923,3.05e-14,560;UBERON:0010316,3.05e-14,560;UBERON:0005291,3.05e-14,560;UBERON:0006598,3.05e-14,560;UBERON:0010317,3.05e-14,560;UBERON:0002532,3.05e-14,560;UBERON:0000926,6.84e-13,315;UBERON:0004120,6.84e-13,315;UBERON:0006603,6.84e-13,315;UBERON:0002204,1.37e-12,167;UBERON:0004765,4.43e-10,90;UBERON:0001434,4.68e-10,100;UBERON:0002371,7.25e-08,76;UBERON:0001474,2.50e-07,82;UBERON:0003102,7.25e-07,99 | |||
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| ||
|short_description=p@chr20:19982026..19982040,+ | |short_description=p@chr20:19982026..19982040,+ | ||
}} | }} |
Latest revision as of 12:19, 28 July 2015
Short description: | p@chr20:19982026..19982040, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:19982026..19982040, + |
Coexpression cluster: | C1258_CD14_Monocytederived_Aortic_Olfactory_spinal_occipital_Lymphatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.80e-17 | 48 |
phagocyte | 5.80e-17 | 48 |
monopoietic cell | 4.84e-14 | 59 |
monocyte | 4.84e-14 | 59 |
monoblast | 4.84e-14 | 59 |
promonocyte | 4.84e-14 | 59 |
classical monocyte | 6.64e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.64e-14 | 42 |
macrophage dendritic cell progenitor | 8.25e-13 | 61 |
myeloid lineage restricted progenitor cell | 1.17e-09 | 66 |
granulocyte monocyte progenitor cell | 2.65e-09 | 67 |
squamous epithelial cell | 4.74e-08 | 63 |
mesodermal cell | 5.06e-08 | 121 |
myeloid leukocyte | 1.09e-07 | 72 |
epithelial cell | 6.28e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
embryonic structure | 1.90e-15 | 564 |
developing anatomical structure | 9.06e-15 | 581 |
embryo | 2.39e-14 | 592 |
germ layer | 3.05e-14 | 560 |
germ layer / neural crest | 3.05e-14 | 560 |
embryonic tissue | 3.05e-14 | 560 |
presumptive structure | 3.05e-14 | 560 |
germ layer / neural crest derived structure | 3.05e-14 | 560 |
epiblast (generic) | 3.05e-14 | 560 |
mesoderm | 6.84e-13 | 315 |
mesoderm-derived structure | 6.84e-13 | 315 |
presumptive mesoderm | 6.84e-13 | 315 |
musculoskeletal system | 1.37e-12 | 167 |
skeletal element | 4.43e-10 | 90 |
skeletal system | 4.68e-10 | 100 |
bone marrow | 7.25e-08 | 76 |
bone element | 2.50e-07 | 82 |
surface structure | 7.25e-07 | 99 |