FFCP PHASE1:Mm9::chr15:76984032..76984041,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=93686 | |EntrezGene=93686 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=100 | |MCL_coexpression_id=100 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BP71 | |UniProt=Q8BP71 | ||
|association_with_transcript=200bp_to_ENSMUST00000111581,ENSMUST00000166610,NM_001110828,NM_001110829,NM_001110830,uc007wnc.2,uc007wnd.2,uc007wne.2,uc007wnf.2,uc011zvf.1,uc011zvg.1_5end | |association_with_transcript=200bp_to_ENSMUST00000111581,ENSMUST00000166610,NM_001110828,NM_001110829,NM_001110830,uc007wnc.2,uc007wnd.2,uc007wne.2,uc007wnf.2,uc011zvf.1,uc011zvg.1_5end | ||
|cluster_id=chr15:76984032..76984041,- | |||
|description=CAGE_peak_15_at_Rbfox2_5end | |description=CAGE_peak_15_at_Rbfox2_5end | ||
|id=chr15:76984032..76984041,- | |id=chr15:76984032..76984041,- | ||
|ontology_enrichment_celltype=CL:0000117!3.63e-12!23;CL:0000337!3.63e-12!23;CL:0000393!1.82e-11!39;CL:0000211!1.82e-11!39;CL:0000540!1.88e-10!33;CL:0000047!1.88e-10!33;CL:0000031!1.88e-10!33;CL:0000404!1.88e-10!33;CL:0000055!2.52e-07!50 | |ontology_enrichment_celltype=CL:0000117!3.63e-12!23;CL:0000337!3.63e-12!23;CL:0000393!1.82e-11!39;CL:0000211!1.82e-11!39;CL:0000540!1.88e-10!33;CL:0000047!1.88e-10!33;CL:0000031!1.88e-10!33;CL:0000404!1.88e-10!33;CL:0000055!2.52e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.58e-25,23;CL:0000337,9.58e-25,23;CL:0000540,3.27e-19,33;CL:0000047,3.27e-19,33;CL:0000031,3.27e-19,33;CL:0000404,3.27e-19,33;CL:0000393,2.04e-18,39;CL:0000211,2.04e-18,39;CL:0002609,8.40e-16,6;CL:0002319,4.00e-14,43;CL:0000221,9.64e-14,44;CL:0000133,9.64e-14,44;CL:0002321,6.25e-12,70;CL:0000120,1.45e-11,3;CL:0000723,2.43e-07,91;CL:0000048,2.43e-07,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.13e-16!73;UBERON:0005743!1.13e-16!73;UBERON:0000073!6.23e-16!75;UBERON:0001016!6.23e-16!75;UBERON:0000955!7.95e-15!50;UBERON:0006238!7.95e-15!50;UBERON:0001049!8.75e-15!52;UBERON:0005068!8.75e-15!52;UBERON:0006241!8.75e-15!52;UBERON:0007135!8.75e-15!52;UBERON:0003080!2.26e-14!40;UBERON:0002616!3.08e-14!49;UBERON:0002020!7.36e-14!34;UBERON:0002780!8.26e-14!39;UBERON:0001890!8.26e-14!39;UBERON:0006240!8.26e-14!39;UBERON:0003056!1.12e-13!49;UBERON:0002346!1.10e-12!71;UBERON:0003075!1.10e-12!71;UBERON:0007284!1.10e-12!71;UBERON:0000033!1.66e-12!63;UBERON:0002791!1.26e-11!29;UBERON:0003528!1.26e-11!29;UBERON:0001893!1.26e-11!29;UBERON:0004121!6.68e-11!102;UBERON:0000924!6.68e-11!102;UBERON:0006601!6.68e-11!102;UBERON:0000956!2.63e-09!21;UBERON:0001869!2.63e-09!21;UBERON:0000203!2.63e-09!21;UBERON:0000025!4.49e-09!114;UBERON:0004111!2.44e-07!122;UBERON:0002619!5.15e-07!17 | |ontology_enrichment_uberon=UBERON:0001017!1.13e-16!73;UBERON:0005743!1.13e-16!73;UBERON:0000073!6.23e-16!75;UBERON:0001016!6.23e-16!75;UBERON:0000955!7.95e-15!50;UBERON:0006238!7.95e-15!50;UBERON:0001049!8.75e-15!52;UBERON:0005068!8.75e-15!52;UBERON:0006241!8.75e-15!52;UBERON:0007135!8.75e-15!52;UBERON:0003080!2.26e-14!40;UBERON:0002616!3.08e-14!49;UBERON:0002020!7.36e-14!34;UBERON:0002780!8.26e-14!39;UBERON:0001890!8.26e-14!39;UBERON:0006240!8.26e-14!39;UBERON:0003056!1.12e-13!49;UBERON:0002346!1.10e-12!71;UBERON:0003075!1.10e-12!71;UBERON:0007284!1.10e-12!71;UBERON:0000033!1.66e-12!63;UBERON:0002791!1.26e-11!29;UBERON:0003528!1.26e-11!29;UBERON:0001893!1.26e-11!29;UBERON:0004121!6.68e-11!102;UBERON:0000924!6.68e-11!102;UBERON:0006601!6.68e-11!102;UBERON:0000956!2.63e-09!21;UBERON:0001869!2.63e-09!21;UBERON:0000203!2.63e-09!21;UBERON:0000025!4.49e-09!114;UBERON:0004111!2.44e-07!122;UBERON:0002619!5.15e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.46e-21,34;UBERON:0003528,6.45e-19,29;UBERON:0002791,6.45e-19,29;UBERON:0001893,6.45e-19,29;UBERON:0001017,2.16e-16,73;UBERON:0000956,4.80e-16,21;UBERON:0001869,4.80e-16,21;UBERON:0000203,4.80e-16,21;UBERON:0001016,7.40e-16,75;UBERON:0000073,2.58e-14,54;UBERON:0002780,1.93e-13,39;UBERON:0001890,1.93e-13,39;UBERON:0006240,1.93e-13,39;UBERON:0001049,4.20e-13,52;UBERON:0005068,4.20e-13,52;UBERON:0006241,4.20e-13,52;UBERON:0007135,4.20e-13,52;UBERON:0003080,4.82e-13,40;UBERON:0004121,9.80e-12,95;UBERON:0000924,9.80e-12,95;UBERON:0006601,9.80e-12,95;UBERON:0002616,5.05e-11,46;UBERON:0000955,9.76e-11,47;UBERON:0006238,9.76e-11,47;UBERON:0003056,3.37e-10,49;UBERON:0002346,4.19e-10,64;UBERON:0003075,4.19e-10,64;UBERON:0007284,4.19e-10,64;UBERON:0002619,6.65e-10,17;UBERON:0010371,1.67e-08,73;UBERON:0010314,3.23e-07,92;UBERON:0000025,4.35e-07,114;UBERON:0000369,9.20e-07,5;UBERON:0002435,9.20e-07,5;UBERON:0000204,9.20e-07,5;UBERON:0010082,9.20e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.709638518536602,0,0,0,0,0.388859798148567,0.419959264876088,0,0,0,0,0.771778308107841,0.573066879877513,1.54701627683233,1.21389876515759,3.1739458756322,1.26766280701236,0.338844532069132,0.889294796111139,0,0,0,0,0,1.34796496001021,5.53524347159932,1.26194976810829,0.285650984403804,0.662605622854841,0.857435594504678,3.06705507258356,2.75765635983006,1.10115880999389,0.638436690425939,0.921639199537461,1.18697658957174,1.37231465403614,0,0.279182999001381,0.56276261003168,0.61119299110724,2.65165726926301,1.56608848879013,0.559198337475902,0.151452386666368,0,0,0,2.03991400112325,0,0.649776417447669,0,0,0.340860645156116,0.519572009205738,0,0,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0,0.289198713839823,0,0.161766849947409,0,0,0,0,0.41889341362691,0,0,0,0,0.898743836428936,0.915001205637253,1.13088916901578,0.521472960576829,0.767146371990992,0.62336413367868,0.648965052271031,0.407357455401265,0,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0.60281927134286,0.272145996605311,0.512454881139399,0.374806898238915,0,0.215567992932842,0.567318240503458,0.351902248327898,0.219195732427575,0.834141747676794,0,0.411564272815887,0.59710280045548,0,0,0,0.828503090142008,0.703578179943289,0.540186184383045,0.710234206755631,0.590292695242212,0.308534225774757,0.465067889500816,0,0.233530684734339,0.493679549740441,0.656669856316381,0.324275238183423,0,0,0,0.420579897128254,1.3377599609307,0,0,0.426576501070468,0.696710015581316,0.515469845288373,0.80673409849337,0.444756087689741,0,0,0,0,0.198956472041151,0,0,0,0,0.379335801906163,0.114248512609729,1.1270773567308,0.610953983535943,0,0.140271639780637,0,0.147610147979602,0.156998727841375,0,0.296452627087149,0,0,0,0.405720242777006,0,0,0.575392274901621,0.162135226775035,0,0,0,1.24815069245824,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.339490171550376,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0.481651769963376,0.234423373184406,0.163934945376675,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0.566153061577665,1.21443210502468,0.584511715822624,0,0.963963949265421,0.141940085208269,0.35613120733451,0.162886959353576,0,0,0,0.604647113929502,0,0,0.614870295887855,0,0.727067458955011,0,0,0,0,0.340439605753788,0.36012218806262,0.388076051348264,0.214337035031592,0.354680467284547,0.535106452806212,0.658196082408484,0.304464949114599,0.23467170806371,0,0,0,0.161464426695906,0.180938774784468,0,0,0,0.18542530201051,0,0.412773735926445,0.370389054739423,0,0,0.228778173206523,0,0,0,0,0.474503990371703,0.406638934253697,0,0,0.436725127492355,0,0.165306911450672,0.26175594198403,0,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.129159823477731,0,0.117357238645754,0.5208175393758,0.209718688851422,0,0,0.316011120628178,0,0.102710957164827,0,0,0.198681354781265,0,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0,0,0,0.503653849092235,0.19318959403219,0,0.183151624267265,0,0,0.564751842617067,1.38097570952153,1.14579102687879,0.343706364687375,0.685082519770642,0.755393897389701,1.35004500046361,0.900642406448441,1.81256963593682,0,0.31136204275253,0,0.341467211508268,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0.962757628775446,0.505394423527595,0.25347929989024,0.943131706930381,0.37456602987953,0.192075457214608,0.17230640686684,0.952587382566147,0.347652977834566,0.77163688185482,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.376437521661322,0.338458431566706,0,0.263069711437843,0.407412341537585,0.561142271657738,0.474540072496697,0.0985044823755635,0.409231043169689,0.464810523557898,0.578719832943424,0.499621155875892,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.709638518536602,0,0,0,0,0.388859798148567,0.419959264876088,0,0,0,0,0.771778308107841,0.573066879877513,1.54701627683233,1.21389876515759,3.1739458756322,1.26766280701236,0.338844532069132,0.889294796111139,0,0,0,0,0,1.34796496001021,5.53524347159932,1.26194976810829,0.285650984403804,0.662605622854841,0.857435594504678,3.06705507258356,2.75765635983006,1.10115880999389,0.638436690425939,0.921639199537461,1.18697658957174,1.37231465403614,0,0.279182999001381,0.56276261003168,0.61119299110724,2.65165726926301,1.56608848879013,0.559198337475902,0.151452386666368,0,0,0,2.03991400112325,0,0.649776417447669,0,0,0.340860645156116,0.519572009205738,0,0,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0,0.289198713839823,0,0.161766849947409,0,0,0,0,0.41889341362691,0,0,0,0,0.898743836428936,0.915001205637253,1.13088916901578,0.521472960576829,0.767146371990992,0.62336413367868,0.648965052271031,0.407357455401265,0,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0.60281927134286,0.272145996605311,0.512454881139399,0.374806898238915,0,0.215567992932842,0.567318240503458,0.351902248327898,0.219195732427575,0.834141747676794,0,0.411564272815887,0.59710280045548,0,0,0,0.828503090142008,0.703578179943289,0.540186184383045,0.710234206755631,0.590292695242212,0.308534225774757,0.465067889500816,0,0.233530684734339,0.493679549740441,0.656669856316381,0.324275238183423,0,0,0,0.420579897128254,1.3377599609307,0,0,0.426576501070468,0.696710015581316,0.515469845288373,0.80673409849337,0.444756087689741,0,0,0,0,0.198956472041151,0,0,0,0,0.379335801906163,0.114248512609729,1.1270773567308,0.610953983535943,0,0.140271639780637,0,0.147610147979602,0.156998727841375,0,0.296452627087149,0,0,0,0.405720242777006,0,0,0.575392274901621,0.162135226775035,0,0,0,1.24815069245824,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.339490171550376,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0.481651769963376,0.234423373184406,0.163934945376675,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0.566153061577665,1.21443210502468,0.584511715822624,0,0.963963949265421,0.141940085208269,0.35613120733451,0.162886959353576,0,0,0,0.604647113929502,0,0,0.614870295887855,0,0.727067458955011,0,0,0,0,0.340439605753788,0.36012218806262,0.388076051348264,0.214337035031592,0.354680467284547,0.535106452806212,0.658196082408484,0.304464949114599,0.23467170806371,0,0,0,0.161464426695906,0.180938774784468,0,0,0,0.18542530201051,0,0.412773735926445,0.370389054739423,0,0,0.228778173206523,0,0,0,0,0.474503990371703,0.406638934253697,0,0,0.436725127492355,0,0.165306911450672,0.26175594198403,0,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.129159823477731,0,0.117357238645754,0.5208175393758,0.209718688851422,0,0,0.316011120628178,0,0.102710957164827,0,0,0.198681354781265,0,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0,0,0,0.503653849092235,0.19318959403219,0,0.183151624267265,0,0,0.564751842617067,1.38097570952153,1.14579102687879,0.343706364687375,0.685082519770642,0.755393897389701,1.35004500046361,0.900642406448441,1.81256963593682,0,0.31136204275253,0,0.341467211508268,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0.962757628775446,0.505394423527595,0.25347929989024,0.943131706930381,0.37456602987953,0.192075457214608,0.17230640686684,0.952587382566147,0.347652977834566,0.77163688185482,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.376437521661322,0.338458431566706,0,0.263069711437843,0.407412341537585,0.561142271657738,0.474540072496697,0.0985044823755635,0.409231043169689,0.464810523557898,0.578719832943424,0.499621155875892,0,0,0,0,0 | ||
|short_description=p15@Rbfox2 | |short_description=p15@Rbfox2 | ||
}} | }} |
Latest revision as of 01:19, 27 September 2015
Short description: | p15@Rbfox2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_Rbfox2_5end |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | 200bp_to_ENSMUST00000111581, ENSMUST00000166610, NM_001110828, NM_001110829, NM_001110830, uc007wnc.2, uc007wnd.2, uc007wne.2, uc007wnf.2, uc011zvf.1, uc011zvg.1_5end |
EntrezGene: | Rbfox2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.58e-25 | 23 |
neuroblast (sensu Vertebrata) | 9.58e-25 | 23 |
neuron | 3.27e-19 | 33 |
neuronal stem cell | 3.27e-19 | 33 |
neuroblast | 3.27e-19 | 33 |
electrically signaling cell | 3.27e-19 | 33 |
electrically responsive cell | 2.04e-18 | 39 |
electrically active cell | 2.04e-18 | 39 |
neuron of cerebral cortex | 8.40e-16 | 6 |
neural cell | 4.00e-14 | 43 |
ectodermal cell | 9.64e-14 | 44 |
neurectodermal cell | 9.64e-14 | 44 |
embryonic cell | 6.25e-12 | 70 |
granule cell | 1.45e-11 | 3 |
somatic stem cell | 2.43e-07 | 91 |
multi fate stem cell | 2.43e-07 | 91 |