FFCP PHASE1:Mm9::chr5:37680151..37680172,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=367 | |MCL_coexpression_id=367 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:37680151..37680172,+ | |||
|description=CAGE_peak_at_chr5:37680151..37680172,+ | |description=CAGE_peak_at_chr5:37680151..37680172,+ | ||
|id=chr5:37680151..37680172,+ | |id=chr5:37680151..37680172,+ | ||
|ontology_enrichment_celltype=CL:0000117!5.40e-18!23;CL:0000337!5.40e-18!23;CL:0000540!1.18e-12!33;CL:0000047!1.18e-12!33;CL:0000031!1.18e-12!33;CL:0000404!1.18e-12!33;CL:0000393!1.59e-09!39;CL:0000211!1.59e-09!39;CL:0002319!7.25e-09!43;CL:0000221!1.71e-08!44;CL:0000133!1.71e-08!44;CL:0002609!1.54e-07!6 | |ontology_enrichment_celltype=CL:0000117!5.40e-18!23;CL:0000337!5.40e-18!23;CL:0000540!1.18e-12!33;CL:0000047!1.18e-12!33;CL:0000031!1.18e-12!33;CL:0000404!1.18e-12!33;CL:0000393!1.59e-09!39;CL:0000211!1.59e-09!39;CL:0002319!7.25e-09!43;CL:0000221!1.71e-08!44;CL:0000133!1.71e-08!44;CL:0002609!1.54e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.15e-24,23;CL:0000337,3.15e-24,23;CL:0000540,2.00e-16,33;CL:0000047,2.00e-16,33;CL:0000031,2.00e-16,33;CL:0000404,2.00e-16,33;CL:0002612,1.45e-15,3;CL:0000120,6.98e-15,3;CL:0000393,1.17e-13,39;CL:0000211,1.17e-13,39;CL:0002319,3.07e-12,43;CL:0000221,6.33e-12,44;CL:0000133,6.33e-12,44;CL:0002609,5.70e-08,6;CL:0002613,1.42e-07,3;CL:0002321,6.85e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.05e-20!71;UBERON:0003075!2.05e-20!71;UBERON:0007284!2.05e-20!71;UBERON:0004121!1.35e-17!102;UBERON:0000924!1.35e-17!102;UBERON:0006601!1.35e-17!102;UBERON:0001017!9.78e-17!73;UBERON:0005743!9.78e-17!73;UBERON:0001049!3.46e-16!52;UBERON:0005068!3.46e-16!52;UBERON:0006241!3.46e-16!52;UBERON:0007135!3.46e-16!52;UBERON:0000073!6.62e-16!75;UBERON:0001016!6.62e-16!75;UBERON:0000033!3.60e-15!63;UBERON:0003056!2.71e-14!49;UBERON:0000955!1.11e-12!50;UBERON:0006238!1.11e-12!50;UBERON:0002020!1.19e-12!34;UBERON:0002616!6.92e-12!49;UBERON:0003080!4.39e-10!40;UBERON:0002780!9.91e-10!39;UBERON:0001890!9.91e-10!39;UBERON:0006240!9.91e-10!39;UBERON:0002791!1.49e-08!29;UBERON:0003528!1.49e-08!29;UBERON:0001893!1.49e-08!29;UBERON:0007811!1.73e-08!86;UBERON:0003076!1.55e-07!12;UBERON:0003057!1.55e-07!12;UBERON:0000153!2.25e-07!94;UBERON:0002240!3.87e-07!6;UBERON:0005174!3.87e-07!6;UBERON:0001137!3.87e-07!6 | |ontology_enrichment_uberon=UBERON:0002346!2.05e-20!71;UBERON:0003075!2.05e-20!71;UBERON:0007284!2.05e-20!71;UBERON:0004121!1.35e-17!102;UBERON:0000924!1.35e-17!102;UBERON:0006601!1.35e-17!102;UBERON:0001017!9.78e-17!73;UBERON:0005743!9.78e-17!73;UBERON:0001049!3.46e-16!52;UBERON:0005068!3.46e-16!52;UBERON:0006241!3.46e-16!52;UBERON:0007135!3.46e-16!52;UBERON:0000073!6.62e-16!75;UBERON:0001016!6.62e-16!75;UBERON:0000033!3.60e-15!63;UBERON:0003056!2.71e-14!49;UBERON:0000955!1.11e-12!50;UBERON:0006238!1.11e-12!50;UBERON:0002020!1.19e-12!34;UBERON:0002616!6.92e-12!49;UBERON:0003080!4.39e-10!40;UBERON:0002780!9.91e-10!39;UBERON:0001890!9.91e-10!39;UBERON:0006240!9.91e-10!39;UBERON:0002791!1.49e-08!29;UBERON:0003528!1.49e-08!29;UBERON:0001893!1.49e-08!29;UBERON:0007811!1.73e-08!86;UBERON:0003076!1.55e-07!12;UBERON:0003057!1.55e-07!12;UBERON:0000153!2.25e-07!94;UBERON:0002240!3.87e-07!6;UBERON:0005174!3.87e-07!6;UBERON:0001137!3.87e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002257,1.45e-15,3;UBERON:0002020,2.18e-13,34;UBERON:0001017,3.36e-13,73;UBERON:0001016,8.66e-13,75;UBERON:0001049,3.61e-10,52;UBERON:0005068,3.61e-10,52;UBERON:0006241,3.61e-10,52;UBERON:0007135,3.61e-10,52;UBERON:0000073,9.89e-10,54;UBERON:0000369,1.13e-09,5;UBERON:0002435,1.13e-09,5;UBERON:0000204,1.13e-09,5;UBERON:0010082,1.13e-09,5;UBERON:0004121,1.27e-09,95;UBERON:0000924,1.27e-09,95;UBERON:0006601,1.27e-09,95;UBERON:0001948,1.48e-09,5;UBERON:0002315,1.48e-09,5;UBERON:0002240,4.83e-08,6;UBERON:0005174,4.83e-08,6;UBERON:0001137,4.83e-08,6;UBERON:0002346,5.97e-08,64;UBERON:0003075,5.97e-08,64;UBERON:0007284,5.97e-08,64;UBERON:0003528,7.93e-08,29;UBERON:0002791,7.93e-08,29;UBERON:0001893,7.93e-08,29;UBERON:0000955,1.67e-07,47;UBERON:0006238,1.67e-07,47;UBERON:0003076,5.62e-07,12;UBERON:0003057,5.62e-07,12;UBERON:0010371,9.19e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,1.05798195854407,1.26766280701236,0.338844532069132,0,0,0,0,0,0.384218305321555,1.55534418462716,0.675029691658453,1.68259969081106,0.571301968807607,0.883474163806454,1.5923803897944,0.958454710182364,0.919218786610021,0,0.255374676170375,0.153606533256243,1.97829431595291,1.55528994124096,0.52091337055676,0.279182999001381,0,0.30559649555362,2.65165726926301,1.85083185038834,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0.913396434936424,0,0.301445281105245,0.587943535678524,0,0,0,0,0,0,0,0,0.878342391034642,4.60782754989601,0,0,0,0,0.149790639404823,0,2.38743269014442,0.521472960576829,0,0.83115217823824,0.162241263067758,0.101839363850316,0,0,0.420883711772948,0.390361328888111,0.229902104433473,0.360124259610698,0.30140963567143,0.816437989815934,0.2562274405697,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,4.01327988279209,0,0,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0,0.38992817423824,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0.292255857911312,0.395287777946524,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0.900642406448441,0,0,0.415149390336707,1.19707462020309,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0,0.64183841918363,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.287177344778066,0.476293691283074,0.231768651889711,0,0.412085900803307,0.588795680537589,0.342869252385415,0,0,0.290692833264657,0.0941093804153306,0.25384382367503,0.182927972872773,0,0.679020569229309,0,0.355905054372522,0.197008964751127,0.409231043169689,0,0.385813221962283,2.49810577937946,0.467863216890817,1.50409737833809,0.956441660344217,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,1.05798195854407,1.26766280701236,0.338844532069132,0,0,0,0,0,0.384218305321555,1.55534418462716,0.675029691658453,1.68259969081106,0.571301968807607,0.883474163806454,1.5923803897944,0.958454710182364,0.919218786610021,0,0.255374676170375,0.153606533256243,1.97829431595291,1.55528994124096,0.52091337055676,0.279182999001381,0,0.30559649555362,2.65165726926301,1.85083185038834,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0.913396434936424,0,0.301445281105245,0.587943535678524,0,0,0,0,0,0,0,0,0.878342391034642,4.60782754989601,0,0,0,0,0.149790639404823,0,2.38743269014442,0.521472960576829,0,0.83115217823824,0.162241263067758,0.101839363850316,0,0,0.420883711772948,0.390361328888111,0.229902104433473,0.360124259610698,0.30140963567143,0.816437989815934,0.2562274405697,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,4.01327988279209,0,0,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0,0.38992817423824,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0.292255857911312,0.395287777946524,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0.900642406448441,0,0,0.415149390336707,1.19707462020309,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0,0.64183841918363,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.287177344778066,0.476293691283074,0.231768651889711,0,0.412085900803307,0.588795680537589,0.342869252385415,0,0,0.290692833264657,0.0941093804153306,0.25384382367503,0.182927972872773,0,0.679020569229309,0,0.355905054372522,0.197008964751127,0.409231043169689,0,0.385813221962283,2.49810577937946,0.467863216890817,1.50409737833809,0.956441660344217,0.220591419119515,0 | ||
|short_description=p@chr5:37680151..37680172,+ | |short_description=p@chr5:37680151..37680172,+ | ||
}} | }} |
Latest revision as of 09:32, 4 August 2015
Short description: | p@chr5:37680151..37680172, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:37680151..37680172, + |
Coexpression cluster: | MCL_coexpression_mm9:367 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.15e-24 | 23 |
neuroblast (sensu Vertebrata) | 3.15e-24 | 23 |
neuron | 2.00e-16 | 33 |
neuronal stem cell | 2.00e-16 | 33 |
neuroblast | 2.00e-16 | 33 |
electrically signaling cell | 2.00e-16 | 33 |
neuron of the ventral spinal cord | 1.45e-15 | 3 |
granule cell | 6.98e-15 | 3 |
electrically responsive cell | 1.17e-13 | 39 |
electrically active cell | 1.17e-13 | 39 |
neural cell | 3.07e-12 | 43 |
ectodermal cell | 6.33e-12 | 44 |
neurectodermal cell | 6.33e-12 | 44 |
neuron of cerebral cortex | 5.70e-08 | 6 |
striatum neuron | 1.42e-07 | 3 |
embryonic cell | 6.85e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
ventral horn of spinal cord | 1.45e-15 | 3 |
gray matter | 2.18e-13 | 34 |
central nervous system | 3.36e-13 | 73 |
nervous system | 8.66e-13 | 75 |
neural tube | 3.61e-10 | 52 |
neural rod | 3.61e-10 | 52 |
future spinal cord | 3.61e-10 | 52 |
neural keel | 3.61e-10 | 52 |
regional part of nervous system | 9.89e-10 | 54 |
corpus striatum | 1.13e-09 | 5 |
striatum | 1.13e-09 | 5 |
ventral part of telencephalon | 1.13e-09 | 5 |
future corpus striatum | 1.13e-09 | 5 |
ectoderm-derived structure | 1.27e-09 | 95 |
ectoderm | 1.27e-09 | 95 |
presumptive ectoderm | 1.27e-09 | 95 |
regional part of spinal cord | 1.48e-09 | 5 |
gray matter of spinal cord | 1.48e-09 | 5 |
spinal cord | 4.83e-08 | 6 |
dorsal region element | 4.83e-08 | 6 |
dorsum | 4.83e-08 | 6 |
neurectoderm | 5.97e-08 | 64 |
neural plate | 5.97e-08 | 64 |
presumptive neural plate | 5.97e-08 | 64 |
brain grey matter | 7.93e-08 | 29 |
regional part of telencephalon | 7.93e-08 | 29 |
telencephalon | 7.93e-08 | 29 |
brain | 1.67e-07 | 47 |
future brain | 1.67e-07 | 47 |
posterior neural tube | 5.62e-07 | 12 |
chordal neural plate | 5.62e-07 | 12 |
ecto-epithelium | 9.19e-07 | 73 |