FFCP PHASE1:Mm9::chr2:38781010..38781017,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=232 | |MCL_coexpression_id=232 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:38781010..38781017,+ | |||
|description=CAGE_peak_at_chr2:38781010..38781017,+ | |description=CAGE_peak_at_chr2:38781010..38781017,+ | ||
|id=chr2:38781010..38781017,+ | |id=chr2:38781010..38781017,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.83e-23!9;CL:0002251!1.83e-23!9;CL:0000239!4.59e-16!6;CL:0000677!4.59e-16!6;CL:0000212!4.59e-16!6;CL:0000584!4.59e-16!6;CL:0000066!1.50e-15!25;CL:0000075!1.19e-13!7;CL:0002076!2.57e-13!15;CL:0000223!9.56e-12!20;CL:0002250!5.69e-09!3;CL:0000473!1.44e-08!3;CL:0000627!1.44e-08!3;CL:0000682!1.44e-08!3 | |ontology_enrichment_celltype=CL:0002563!1.83e-23!9;CL:0002251!1.83e-23!9;CL:0000239!4.59e-16!6;CL:0000677!4.59e-16!6;CL:0000212!4.59e-16!6;CL:0000584!4.59e-16!6;CL:0000066!1.50e-15!25;CL:0000075!1.19e-13!7;CL:0002076!2.57e-13!15;CL:0000223!9.56e-12!20;CL:0002250!5.69e-09!3;CL:0000473!1.44e-08!3;CL:0000627!1.44e-08!3;CL:0000682!1.44e-08!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.30e-53,9;CL:0002251,5.30e-53,9;CL:0000239,1.54e-40,6;CL:0000677,1.54e-40,6;CL:0000584,1.54e-40,6;CL:0000075,8.30e-35,7;CL:0002076,7.46e-32,15;CL:0000066,8.28e-25,25;CL:0000223,6.69e-24,20;CL:0002250,2.32e-14,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!1.83e-23!9;UBERON:0004808!1.83e-23!9;UBERON:0001277!1.83e-23!9;UBERON:0000344!3.44e-23!15;UBERON:0001242!3.94e-23!13;UBERON:0000060!3.94e-23!13;UBERON:0001262!3.94e-23!13;UBERON:0004786!3.94e-23!13;UBERON:0000485!7.49e-19!11;UBERON:0004923!1.94e-13!24;UBERON:0000160!9.03e-12!43;UBERON:0005409!6.99e-10!59 | |ontology_enrichment_uberon=UBERON:0003350!1.83e-23!9;UBERON:0004808!1.83e-23!9;UBERON:0001277!1.83e-23!9;UBERON:0000344!3.44e-23!15;UBERON:0001242!3.94e-23!13;UBERON:0000060!3.94e-23!13;UBERON:0001262!3.94e-23!13;UBERON:0004786!3.94e-23!13;UBERON:0000485!7.49e-19!11;UBERON:0004923!1.94e-13!24;UBERON:0000160!9.03e-12!43;UBERON:0005409!6.99e-10!59 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.30e-53,9;UBERON:0004808,5.30e-53,9;UBERON:0001277,5.30e-53,9;UBERON:0000485,2.14e-43,11;UBERON:0001242,9.70e-37,13;UBERON:0001262,9.70e-37,13;UBERON:0004786,9.70e-37,13;UBERON:0000344,7.46e-32,15;UBERON:0004923,6.47e-20,24;UBERON:0000160,2.10e-15,31;UBERON:0005409,4.15e-10,47;UBERON:0003929,1.32e-08,55;UBERON:0000490,3.98e-07,66;UBERON:0005911,8.37e-07,69 | |||
|phase1_expression=0,2.44282785347553,1.36499771816861,3.93203474698879,4.50806156951712,2.18243053485457,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0.57423196411502,2.15380998079537,0.646413698057667,0.380046838912748,0,0,0,0,0,4.33277429626912,0.831173226792462,5.71674197534634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,1.26361379216837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.44282785347553,1.36499771816861,3.93203474698879,4.50806156951712,2.18243053485457,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0.57423196411502,2.15380998079537,0.646413698057667,0.380046838912748,0,0,0,0,0,4.33277429626912,0.831173226792462,5.71674197534634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,1.26361379216837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:38781010..38781017,+ | |short_description=p@chr2:38781010..38781017,+ | ||
}} | }} |
Latest revision as of 04:00, 5 August 2015
Short description: | p@chr2:38781010..38781017, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:38781010..38781017, + |
Coexpression cluster: | MCL_coexpression_mm9:232 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.30e-53 | 9 |
epithelial cell of alimentary canal | 5.30e-53 | 9 |
brush border epithelial cell | 1.54e-40 | 6 |
gut absorptive cell | 1.54e-40 | 6 |
enterocyte | 1.54e-40 | 6 |
columnar/cuboidal epithelial cell | 8.30e-35 | 7 |
endo-epithelial cell | 7.46e-32 | 15 |
epithelial cell | 8.28e-25 | 25 |
endodermal cell | 6.69e-24 | 20 |
intestinal crypt stem cell | 2.32e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 5.30e-53 | 9 |
gastrointestinal system epithelium | 5.30e-53 | 9 |
intestinal epithelium | 5.30e-53 | 9 |
simple columnar epithelium | 2.14e-43 | 11 |
intestinal mucosa | 9.70e-37 | 13 |
wall of intestine | 9.70e-37 | 13 |
gastrointestinal system mucosa | 9.70e-37 | 13 |
mucosa | 7.46e-32 | 15 |
organ component layer | 6.47e-20 | 24 |
intestine | 2.10e-15 | 31 |
gastrointestinal system | 4.15e-10 | 47 |
gut epithelium | 1.32e-08 | 55 |
unilaminar epithelium | 3.98e-07 | 66 |
endo-epithelium | 8.37e-07 | 69 |