FFCP PHASE1:Mm9::chr7:20550777..20550782,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71601 | |EntrezGene=71601 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |||
|UniProt=Q9D2Z1 | |UniProt=Q9D2Z1 | ||
|association_with_transcript=16bp_to_ENSMUST00000094753,NM_027839,uc012fbl.1_5end | |association_with_transcript=16bp_to_ENSMUST00000094753,NM_027839,uc012fbl.1_5end | ||
|cluster_id=chr7:20550777..20550782,+ | |||
|description=CAGE_peak_3_at_Ceacam20_5end | |description=CAGE_peak_3_at_Ceacam20_5end | ||
|id=chr7:20550777..20550782,+ | |id=chr7:20550777..20550782,+ | ||
|ontology_enrichment_celltype=CL:0000239!4.50e-14!6;CL:0000677!4.50e-14!6;CL:0000212!4.50e-14!6;CL:0000584!4.50e-14!6;CL:0000075!6.06e-12!7;CL:0002563!7.05e-12!9;CL:0002251!7.05e-12!9;CL:0000066!6.80e-09!25;CL:0000473!1.16e-07!3;CL:0000627!1.16e-07!3;CL:0000682!1.16e-07!3 | |ontology_enrichment_celltype=CL:0000239!4.50e-14!6;CL:0000677!4.50e-14!6;CL:0000212!4.50e-14!6;CL:0000584!4.50e-14!6;CL:0000075!6.06e-12!7;CL:0002563!7.05e-12!9;CL:0002251!7.05e-12!9;CL:0000066!6.80e-09!25;CL:0000473!1.16e-07!3;CL:0000627!1.16e-07!3;CL:0000682!1.16e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.19e-11,3;CL:0000239,4.86e-11,6;CL:0000677,4.86e-11,6;CL:0000584,4.86e-11,6;CL:0000075,1.80e-09,7;CL:0002563,2.26e-07,9;CL:0002251,2.26e-07,9;CL:0000066,8.31e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.43e-26!43;UBERON:0000344!7.20e-24!15;UBERON:0005409!1.71e-20!59;UBERON:0001242!4.21e-20!13;UBERON:0000060!4.21e-20!13;UBERON:0001262!4.21e-20!13;UBERON:0004786!4.21e-20!13;UBERON:0004923!9.95e-14!24;UBERON:0003350!7.05e-12!9;UBERON:0004808!7.05e-12!9;UBERON:0001277!7.05e-12!9;UBERON:0001007!7.16e-11!128;UBERON:0001555!7.16e-11!128;UBERON:0007026!7.16e-11!128;UBERON:0004119!1.37e-10!130;UBERON:0000925!1.37e-10!130;UBERON:0006595!1.37e-10!130;UBERON:0000485!1.65e-09!11;UBERON:0004921!2.95e-09!126;UBERON:0004185!2.95e-09!126;UBERON:0000331!8.08e-08!3;UBERON:0002116!8.08e-08!3;UBERON:0001204!8.08e-08!3;UBERON:0001168!8.08e-08!3 | |ontology_enrichment_uberon=UBERON:0000160!8.43e-26!43;UBERON:0000344!7.20e-24!15;UBERON:0005409!1.71e-20!59;UBERON:0001242!4.21e-20!13;UBERON:0000060!4.21e-20!13;UBERON:0001262!4.21e-20!13;UBERON:0004786!4.21e-20!13;UBERON:0004923!9.95e-14!24;UBERON:0003350!7.05e-12!9;UBERON:0004808!7.05e-12!9;UBERON:0001277!7.05e-12!9;UBERON:0001007!7.16e-11!128;UBERON:0001555!7.16e-11!128;UBERON:0007026!7.16e-11!128;UBERON:0004119!1.37e-10!130;UBERON:0000925!1.37e-10!130;UBERON:0006595!1.37e-10!130;UBERON:0000485!1.65e-09!11;UBERON:0004921!2.95e-09!126;UBERON:0004185!2.95e-09!126;UBERON:0000331!8.08e-08!3;UBERON:0002116!8.08e-08!3;UBERON:0001204!8.08e-08!3;UBERON:0001168!8.08e-08!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.53e-41,31;UBERON:0005409,5.79e-26,47;UBERON:0000344,4.61e-24,15;UBERON:0001242,1.90e-18,13;UBERON:0001262,1.90e-18,13;UBERON:0004786,1.90e-18,13;UBERON:0002108,3.15e-15,4;UBERON:0004923,2.06e-14,24;UBERON:0000331,6.55e-12,3;UBERON:0002116,6.55e-12,3;UBERON:0001204,6.55e-12,3;UBERON:0001168,6.55e-12,3;UBERON:0001007,8.95e-11,116;UBERON:0001555,8.95e-11,116;UBERON:0007026,8.95e-11,116;UBERON:0004119,1.58e-10,118;UBERON:0000925,1.58e-10,118;UBERON:0006595,1.58e-10,118;UBERON:0004921,1.14e-08,114;UBERON:0001155,2.12e-08,2;UBERON:0000059,2.12e-08,2;UBERON:0001962,8.77e-08,2;UBERON:0001961,8.77e-08,2;UBERON:0001744,8.77e-08,2;UBERON:0003350,2.26e-07,9;UBERON:0004808,2.26e-07,9;UBERON:0001277,2.26e-07,9 | |||
|phase1_expression=0,4.88565570695105,5.45999087267443,8.16653370528441,8.01433167914156,0.839396359559449,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,1.14704640533585,3.44539178469012,2.15380998079537,1.939241094173,7.60093677825496,1.76421090831952,2.66076612786366,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5646574044329,3.70230793328962,0,0,0,0,0,0.190225626112559,3.32170343081158,0.329397909448022,1.00534083520108,1.39269530428806,1.55971269695296,6.29173586057955,4.32276099749388,3.18626037206988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | |phase1_expression=0,4.88565570695105,5.45999087267443,8.16653370528441,8.01433167914156,0.839396359559449,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,1.14704640533585,3.44539178469012,2.15380998079537,1.939241094173,7.60093677825496,1.76421090831952,2.66076612786366,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5646574044329,3.70230793328962,0,0,0,0,0,0.190225626112559,3.32170343081158,0.329397909448022,1.00534083520108,1.39269530428806,1.55971269695296,6.29173586057955,4.32276099749388,3.18626037206988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | ||
|short_description=p3@Ceacam20 | |short_description=p3@Ceacam20 | ||
}} | }} |
Latest revision as of 09:17, 26 September 2015
Short description: | p3@Ceacam20 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ceacam20_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 16bp_to_ENSMUST00000094753, NM_027839, uc012fbl.1_5end |
EntrezGene: | Ceacam20 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.19e-11 | 3 |
brush border epithelial cell | 4.86e-11 | 6 |
gut absorptive cell | 4.86e-11 | 6 |
enterocyte | 4.86e-11 | 6 |
columnar/cuboidal epithelial cell | 1.80e-09 | 7 |
intestinal epithelial cell | 2.26e-07 | 9 |
epithelial cell of alimentary canal | 2.26e-07 | 9 |
epithelial cell | 8.31e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.53e-41 | 31 |
gastrointestinal system | 5.79e-26 | 47 |
mucosa | 4.61e-24 | 15 |
intestinal mucosa | 1.90e-18 | 13 |
wall of intestine | 1.90e-18 | 13 |
gastrointestinal system mucosa | 1.90e-18 | 13 |
small intestine | 3.15e-15 | 4 |
organ component layer | 2.06e-14 | 24 |
ileal mucosa | 6.55e-12 | 3 |
ileum | 6.55e-12 | 3 |
mucosa of small intestine | 6.55e-12 | 3 |
wall of small intestine | 6.55e-12 | 3 |
digestive system | 8.95e-11 | 116 |
digestive tract | 8.95e-11 | 116 |
primitive gut | 8.95e-11 | 116 |
endoderm-derived structure | 1.58e-10 | 118 |
endoderm | 1.58e-10 | 118 |
presumptive endoderm | 1.58e-10 | 118 |
subdivision of digestive tract | 1.14e-08 | 114 |
colon | 2.12e-08 | 2 |
large intestine | 2.12e-08 | 2 |
gut-associated lymphoid tissue | 8.77e-08 | 2 |
mucosa-associated lymphoid tissue | 8.77e-08 | 2 |
lymphoid tissue | 8.77e-08 | 2 |
epithelium of mucosa | 2.26e-07 | 9 |
gastrointestinal system epithelium | 2.26e-07 | 9 |
intestinal epithelium | 2.26e-07 | 9 |