FFCP PHASE1:Mm9::chr8:93340981..93340990,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=205 | |MCL_coexpression_id=205 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:93340981..93340990,- | |||
|description=CAGE_peak_at_chr8:93340981..93340990,- | |description=CAGE_peak_at_chr8:93340981..93340990,- | ||
|id=chr8:93340981..93340990,- | |id=chr8:93340981..93340990,- | ||
|ontology_enrichment_celltype=CL:0002453!1.61e-14!8;CL:0002319!4.73e-13!43;CL:0000221!1.19e-12!44;CL:0000133!1.19e-12!44;CL:0000333!2.39e-11!10;CL:0000095!2.39e-11!10;CL:0000243!2.39e-11!10;CL:0000123!2.39e-11!10;CL:0000125!2.39e-11!10;CL:0000030!2.39e-11!10;CL:0000339!2.39e-11!10;CL:0000055!1.39e-10!50;CL:0000128!2.73e-10!6;CL:0000126!2.73e-10!6;CL:0000127!2.73e-10!6;CL:0000117!1.02e-07!23;CL:0000337!1.02e-07!23;CL:0002614!1.93e-07!3;CL:0002321!2.99e-07!70;CL:0000220!2.99e-07!70;CL:0002612!4.85e-07!3 | |ontology_enrichment_celltype=CL:0002453!1.61e-14!8;CL:0002319!4.73e-13!43;CL:0000221!1.19e-12!44;CL:0000133!1.19e-12!44;CL:0000333!2.39e-11!10;CL:0000095!2.39e-11!10;CL:0000243!2.39e-11!10;CL:0000123!2.39e-11!10;CL:0000125!2.39e-11!10;CL:0000030!2.39e-11!10;CL:0000339!2.39e-11!10;CL:0000055!1.39e-10!50;CL:0000128!2.73e-10!6;CL:0000126!2.73e-10!6;CL:0000127!2.73e-10!6;CL:0000117!1.02e-07!23;CL:0000337!1.02e-07!23;CL:0002614!1.93e-07!3;CL:0002321!2.99e-07!70;CL:0000220!2.99e-07!70;CL:0002612!4.85e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.83e-45,8;CL:0000333,2.47e-36,10;CL:0000095,2.47e-36,10;CL:0000243,2.47e-36,10;CL:0000123,2.47e-36,10;CL:0000125,2.47e-36,10;CL:0000030,2.47e-36,10;CL:0000339,2.47e-36,10;CL:0000128,2.39e-31,6;CL:0000126,2.39e-31,6;CL:0000127,2.39e-31,6;CL:0002319,7.63e-20,43;CL:0000221,2.25e-19,44;CL:0000133,2.25e-19,44;CL:0002605,2.05e-16,2;CL:0002604,2.05e-16,2;CL:0000878,5.77e-16,2;CL:0000129,5.77e-16,2;CL:0002611,2.24e-15,2;CL:0002321,7.57e-12,70;CL:0002614,2.75e-10,3;CL:0002194,1.91e-08,4;CL:0000766,1.91e-08,4;CL:0000234,1.91e-08,4;CL:0000576,1.91e-08,4;CL:0000235,1.91e-08,4;CL:0000864,1.91e-08,4;CL:0002009,1.91e-08,4;CL:0000040,1.91e-08,4;CL:0000559,1.91e-08,4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.72e-17!73;UBERON:0005743!2.72e-17!73;UBERON:0000073!1.21e-16!75;UBERON:0001016!1.21e-16!75;UBERON:0003076!2.30e-16!12;UBERON:0003057!2.30e-16!12;UBERON:0001049!1.36e-13!52;UBERON:0005068!1.36e-13!52;UBERON:0006241!1.36e-13!52;UBERON:0007135!1.36e-13!52;UBERON:0002240!8.12e-13!6;UBERON:0005174!8.12e-13!6;UBERON:0001137!8.12e-13!6;UBERON:0004121!2.50e-11!102;UBERON:0000924!2.50e-11!102;UBERON:0006601!2.50e-11!102;UBERON:0001948!3.54e-11!5;UBERON:0002315!3.54e-11!5;UBERON:0002020!8.10e-10!34;UBERON:0002346!1.61e-09!71;UBERON:0003075!1.61e-09!71;UBERON:0007284!1.61e-09!71;UBERON:0002298!6.50e-09!6;UBERON:0002616!7.43e-09!49;UBERON:0000955!1.34e-08!50;UBERON:0006238!1.34e-08!50;UBERON:0000033!9.24e-08!63;UBERON:0002038!1.93e-07!3;UBERON:0002308!1.93e-07!3;UBERON:0009663!1.93e-07!3;UBERON:0009661!1.93e-07!3;UBERON:0006331!1.93e-07!3;UBERON:0000125!1.93e-07!3;UBERON:0002257!4.85e-07!3;UBERON:0000025!9.74e-07!114 | |ontology_enrichment_uberon=UBERON:0001017!2.72e-17!73;UBERON:0005743!2.72e-17!73;UBERON:0000073!1.21e-16!75;UBERON:0001016!1.21e-16!75;UBERON:0003076!2.30e-16!12;UBERON:0003057!2.30e-16!12;UBERON:0001049!1.36e-13!52;UBERON:0005068!1.36e-13!52;UBERON:0006241!1.36e-13!52;UBERON:0007135!1.36e-13!52;UBERON:0002240!8.12e-13!6;UBERON:0005174!8.12e-13!6;UBERON:0001137!8.12e-13!6;UBERON:0004121!2.50e-11!102;UBERON:0000924!2.50e-11!102;UBERON:0006601!2.50e-11!102;UBERON:0001948!3.54e-11!5;UBERON:0002315!3.54e-11!5;UBERON:0002020!8.10e-10!34;UBERON:0002346!1.61e-09!71;UBERON:0003075!1.61e-09!71;UBERON:0007284!1.61e-09!71;UBERON:0002298!6.50e-09!6;UBERON:0002616!7.43e-09!49;UBERON:0000955!1.34e-08!50;UBERON:0006238!1.34e-08!50;UBERON:0000033!9.24e-08!63;UBERON:0002038!1.93e-07!3;UBERON:0002308!1.93e-07!3;UBERON:0009663!1.93e-07!3;UBERON:0009661!1.93e-07!3;UBERON:0006331!1.93e-07!3;UBERON:0000125!1.93e-07!3;UBERON:0002257!4.85e-07!3;UBERON:0000025!9.74e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002256,2.24e-15,2;UBERON:0001017,1.35e-13,73;UBERON:0001016,3.30e-13,75;UBERON:0002038,2.75e-10,3;UBERON:0009663,2.75e-10,3;UBERON:0009661,2.75e-10,3;UBERON:0000125,2.75e-10,3;UBERON:0002308,2.75e-10,3;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0002020,4.32e-10,34;UBERON:0001049,2.09e-08,52;UBERON:0005068,2.09e-08,52;UBERON:0006241,2.09e-08,52;UBERON:0007135,2.09e-08,52;UBERON:0000073,4.53e-08,54;UBERON:0002950,6.11e-08,4;UBERON:0001891,6.11e-08,4;UBERON:0009616,6.11e-08,4;UBERON:0010286,6.11e-08,4 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61630187656536,7.90870257844099,5.44403717407994,2.2397827460058,1.43752564364972,0,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0,0,2.09720077362883,3.45796474789399,0,0,0,1.99955689082663,1.32521124570968,0,0,0,0,0.383062014255563,0.307213066512487,0,0,0,1.11673199600552,0.56276261003168,1.22238598221448,0.589257170947335,0.854230084794618,0.186399445825301,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0.324482526135515,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0,0.157635144106191,0,0.478364305972461,0.163863314715738,0,0,0,0,0,0,0.642202359951168,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,1.35004500046361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61630187656536,7.90870257844099,5.44403717407994,2.2397827460058,1.43752564364972,0,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0,0,2.09720077362883,3.45796474789399,0,0,0,1.99955689082663,1.32521124570968,0,0,0,0,0.383062014255563,0.307213066512487,0,0,0,1.11673199600552,0.56276261003168,1.22238598221448,0.589257170947335,0.854230084794618,0.186399445825301,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0.324482526135515,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0,0.157635144106191,0,0.478364305972461,0.163863314715738,0,0,0,0,0,0,0.642202359951168,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,1.35004500046361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:93340981..93340990,- | |short_description=p@chr8:93340981..93340990,- | ||
}} | }} |
Latest revision as of 08:02, 4 August 2015
Short description: | p@chr8:93340981..93340990, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:93340981..93340990, - |
Coexpression cluster: | MCL_coexpression_mm9:205 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.83e-45 | 8 |
migratory neural crest cell | 2.47e-36 | 10 |
neuron associated cell | 2.47e-36 | 10 |
glial cell (sensu Vertebrata) | 2.47e-36 | 10 |
neuron associated cell (sensu Vertebrata) | 2.47e-36 | 10 |
glial cell | 2.47e-36 | 10 |
glioblast | 2.47e-36 | 10 |
glioblast (sensu Vertebrata) | 2.47e-36 | 10 |
oligodendrocyte | 2.39e-31 | 6 |
macroglial cell | 2.39e-31 | 6 |
astrocyte | 2.39e-31 | 6 |
neural cell | 7.63e-20 | 43 |
ectodermal cell | 2.25e-19 | 44 |
neurectodermal cell | 2.25e-19 | 44 |
astrocyte of the cerebral cortex | 2.05e-16 | 2 |
astrocyte of the hippocampus | 2.05e-16 | 2 |
central nervous system macrophage | 5.77e-16 | 2 |
microglial cell | 5.77e-16 | 2 |
neuron of the dorsal spinal cord | 2.24e-15 | 2 |
embryonic cell | 7.57e-12 | 70 |
neuron of the substantia nigra | 2.75e-10 | 3 |
monopoietic cell | 1.91e-08 | 4 |
myeloid leukocyte | 1.91e-08 | 4 |
phagocyte | 1.91e-08 | 4 |
monocyte | 1.91e-08 | 4 |
macrophage | 1.91e-08 | 4 |
tissue-resident macrophage | 1.91e-08 | 4 |
macrophage dendritic cell progenitor | 1.91e-08 | 4 |
monoblast | 1.91e-08 | 4 |
promonocyte | 1.91e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
dorsal horn of spinal cord | 2.24e-15 | 2 |
central nervous system | 1.35e-13 | 73 |
nervous system | 3.30e-13 | 75 |
substantia nigra | 2.75e-10 | 3 |
telencephalic nucleus | 2.75e-10 | 3 |
midbrain nucleus | 2.75e-10 | 3 |
neural nucleus | 2.75e-10 | 3 |
nucleus of brain | 2.75e-10 | 3 |
ectoderm-derived structure | 3.22e-10 | 95 |
ectoderm | 3.22e-10 | 95 |
presumptive ectoderm | 3.22e-10 | 95 |
gray matter | 4.32e-10 | 34 |
neural tube | 2.09e-08 | 52 |
neural rod | 2.09e-08 | 52 |
future spinal cord | 2.09e-08 | 52 |
neural keel | 2.09e-08 | 52 |
regional part of nervous system | 4.53e-08 | 54 |
regional part of midbrain | 6.11e-08 | 4 |
midbrain | 6.11e-08 | 4 |
presumptive midbrain | 6.11e-08 | 4 |
midbrain neural tube | 6.11e-08 | 4 |