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FFCP PHASE1:Mm9::chr6:138369900..138369926,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=109593
|EntrezGene=109593
|HGNC=
|HGNC=
|MCL_coexpression_id=708
|MCL_coexpression_id=708
|TSSclassifier=NA
|UniProt=E9PWI9
|UniProt=E9PWI9
|association_with_transcript=46bp_to_ENSMUST00000163065_5end
|association_with_transcript=46bp_to_ENSMUST00000163065_5end
|cluster_id=chr6:138369900..138369926,-
|description=CAGE_peak_5_at_Lmo3_5end
|description=CAGE_peak_5_at_Lmo3_5end
|id=chr6:138369900..138369926,-
|id=chr6:138369900..138369926,-
|ontology_enrichment_celltype=CL:0000117!1.08e-16!23;CL:0000337!1.08e-16!23;CL:0000540!8.91e-13!33;CL:0000047!8.91e-13!33;CL:0000031!8.91e-13!33;CL:0000404!8.91e-13!33;CL:0000393!2.98e-09!39;CL:0000211!2.98e-09!39;CL:0000221!1.32e-08!44;CL:0000133!1.32e-08!44;CL:0002319!3.70e-08!43
|ontology_enrichment_celltype=CL:0000117!1.08e-16!23;CL:0000337!1.08e-16!23;CL:0000540!8.91e-13!33;CL:0000047!8.91e-13!33;CL:0000031!8.91e-13!33;CL:0000404!8.91e-13!33;CL:0000393!2.98e-09!39;CL:0000211!2.98e-09!39;CL:0000221!1.32e-08!44;CL:0000133!1.32e-08!44;CL:0002319!3.70e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000117,5.43e-29,23;CL:0000337,5.43e-29,23;CL:0000540,3.64e-20,33;CL:0000047,3.64e-20,33;CL:0000031,3.64e-20,33;CL:0000404,3.64e-20,33;CL:0000393,4.12e-16,39;CL:0000211,4.12e-16,39;CL:0000221,6.59e-15,44;CL:0000133,6.59e-15,44;CL:0002319,4.76e-14,43;CL:0002609,3.81e-10,6;CL:0002321,3.67e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!8.07e-27!73;UBERON:0005743!8.07e-27!73;UBERON:0001049!1.32e-26!52;UBERON:0005068!1.32e-26!52;UBERON:0006241!1.32e-26!52;UBERON:0007135!1.32e-26!52;UBERON:0000073!1.81e-25!75;UBERON:0001016!1.81e-25!75;UBERON:0000955!3.35e-25!50;UBERON:0006238!3.35e-25!50;UBERON:0003080!1.17e-24!40;UBERON:0002616!2.64e-24!49;UBERON:0002780!8.47e-24!39;UBERON:0001890!8.47e-24!39;UBERON:0006240!8.47e-24!39;UBERON:0002020!1.53e-23!34;UBERON:0003056!1.21e-21!49;UBERON:0000033!2.32e-21!63;UBERON:0002791!6.74e-20!29;UBERON:0003528!6.74e-20!29;UBERON:0001893!6.74e-20!29;UBERON:0002346!1.93e-19!71;UBERON:0003075!1.93e-19!71;UBERON:0007284!1.93e-19!71;UBERON:0004121!3.99e-19!102;UBERON:0000924!3.99e-19!102;UBERON:0006601!3.99e-19!102;UBERON:0000956!2.66e-14!21;UBERON:0001869!2.66e-14!21;UBERON:0000203!2.66e-14!21;UBERON:0007811!2.37e-11!86;UBERON:0002619!3.10e-11!17;UBERON:0000153!3.65e-11!94;UBERON:0002021!2.58e-09!10;UBERON:0000411!2.58e-09!10;UBERON:0001950!2.58e-09!10;UBERON:0000025!6.70e-07!114;UBERON:0002420!8.81e-07!8;UBERON:0007245!8.81e-07!8;UBERON:0010009!8.81e-07!8;UBERON:0010011!8.81e-07!8;UBERON:0000454!8.81e-07!8
|ontology_enrichment_uberon=UBERON:0001017!8.07e-27!73;UBERON:0005743!8.07e-27!73;UBERON:0001049!1.32e-26!52;UBERON:0005068!1.32e-26!52;UBERON:0006241!1.32e-26!52;UBERON:0007135!1.32e-26!52;UBERON:0000073!1.81e-25!75;UBERON:0001016!1.81e-25!75;UBERON:0000955!3.35e-25!50;UBERON:0006238!3.35e-25!50;UBERON:0003080!1.17e-24!40;UBERON:0002616!2.64e-24!49;UBERON:0002780!8.47e-24!39;UBERON:0001890!8.47e-24!39;UBERON:0006240!8.47e-24!39;UBERON:0002020!1.53e-23!34;UBERON:0003056!1.21e-21!49;UBERON:0000033!2.32e-21!63;UBERON:0002791!6.74e-20!29;UBERON:0003528!6.74e-20!29;UBERON:0001893!6.74e-20!29;UBERON:0002346!1.93e-19!71;UBERON:0003075!1.93e-19!71;UBERON:0007284!1.93e-19!71;UBERON:0004121!3.99e-19!102;UBERON:0000924!3.99e-19!102;UBERON:0006601!3.99e-19!102;UBERON:0000956!2.66e-14!21;UBERON:0001869!2.66e-14!21;UBERON:0000203!2.66e-14!21;UBERON:0007811!2.37e-11!86;UBERON:0002619!3.10e-11!17;UBERON:0000153!3.65e-11!94;UBERON:0002021!2.58e-09!10;UBERON:0000411!2.58e-09!10;UBERON:0001950!2.58e-09!10;UBERON:0000025!6.70e-07!114;UBERON:0002420!8.81e-07!8;UBERON:0007245!8.81e-07!8;UBERON:0010009!8.81e-07!8;UBERON:0010011!8.81e-07!8;UBERON:0000454!8.81e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.62e-41,34;UBERON:0000073,1.85e-38,54;UBERON:0001017,3.38e-36,73;UBERON:0001049,8.55e-36,52;UBERON:0005068,8.55e-36,52;UBERON:0006241,8.55e-36,52;UBERON:0007135,8.55e-36,52;UBERON:0001016,6.23e-35,75;UBERON:0003528,3.79e-34,29;UBERON:0002791,3.79e-34,29;UBERON:0001893,3.79e-34,29;UBERON:0000955,1.55e-29,47;UBERON:0006238,1.55e-29,47;UBERON:0003080,3.43e-29,40;UBERON:0002616,5.02e-28,46;UBERON:0002780,1.03e-27,39;UBERON:0001890,1.03e-27,39;UBERON:0006240,1.03e-27,39;UBERON:0002346,3.18e-27,64;UBERON:0003075,3.18e-27,64;UBERON:0007284,3.18e-27,64;UBERON:0004121,1.49e-26,95;UBERON:0000924,1.49e-26,95;UBERON:0006601,1.49e-26,95;UBERON:0000956,4.29e-25,21;UBERON:0001869,4.29e-25,21;UBERON:0000203,4.29e-25,21;UBERON:0010371,4.76e-24,73;UBERON:0003056,2.48e-22,49;UBERON:0002619,3.36e-19,17;UBERON:0010314,4.94e-17,92;UBERON:0002021,4.62e-14,10;UBERON:0000411,4.62e-14,10;UBERON:0001950,4.62e-14,10;UBERON:0000025,6.32e-12,114;UBERON:0004111,2.72e-11,122;UBERON:0002420,6.35e-10,8;UBERON:0007245,6.35e-10,8;UBERON:0010009,6.35e-10,8;UBERON:0010011,6.35e-10,8;UBERON:0000454,6.35e-10,8;UBERON:0002240,4.76e-09,6;UBERON:0005174,4.76e-09,6;UBERON:0001137,4.76e-09,6;UBERON:0000369,5.93e-09,5;UBERON:0002435,5.93e-09,5;UBERON:0000204,5.93e-09,5;UBERON:0010082,5.93e-09,5;UBERON:0001948,6.39e-08,5;UBERON:0002315,6.39e-08,5;UBERON:0011216,6.44e-08,194;UBERON:0003076,5.40e-07,12;UBERON:0003057,5.40e-07,12;UBERON:0001954,8.70e-07,7;UBERON:0003022,8.70e-07,7;UBERON:0002421,8.70e-07,7;UBERON:0000349,8.70e-07,7;UBERON:0002600,8.70e-07,7
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,2.11596391708813,1.26766280701236,0,0,0,0,0,0.299600110518405,0,2.07379224616955,2.16009501330705,2.10324961351382,1.99955689082663,1.98781686856452,5.14461356702807,5.07980996396653,1.83843757322004,1.10115880999389,2.042997409363,2.15049146558741,2.1101806036831,3.47653045689157,1.56274011167028,0.279182999001381,2.25105044012672,1.68078072554491,1.76777151284201,1.85083185038834,2.42319279572891,0,0,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,2.69623150928681,5.03250663100489,4.64921102817598,7.12679712788333,6.39288643325826,1.45451631191692,2.27137768294861,0,0,0,0,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0.2562274405697,0.281105173679186,0,0.215567992932842,1.13463648100692,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0.473489471170421,0,0.308534225774757,0,0,0,0,0,0.0810688095458557,0,0,0,9.2527577368216,6.5858951922742,0,0,0.213288250535234,0.232236671860439,0.77320476793256,0.403367049246685,0.444756087689741,0,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51593129416388,0.488894929326078,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,1.28440471990234,1.40654023910644,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,1.16902343164525,0.790575555893047,3.85585579706168,0,0.35613120733451,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,0.646793418913773,0.214337035031592,0.532020700926821,0.356737635204141,0.493647061806363,0.304464949114599,0,0,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.406638934253697,0.324016022465404,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0.410843828659309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,6.21227026878773,3.68260189205742,4.58316410751517,2.749650917499,2.05524755931193,6.7985450765073,0.675022500231806,2.70192721934532,2.71885445390523,4.14208249401456,2.49089634202024,2.39414924040619,2.21953687480374,0.243106717068294,0.838452650511929,0.367687016900028,1.33348036680969,0.618105171716683,2.56735367673452,0,0.760437899670719,1.13175804831646,0.468207537349412,0.640251524048693,1.09127391015665,0.476293691283074,0.695305955669133,0.192909220463705,0,0.147198920134397,0.342869252385415,0.70990322463735,0.476872379894642,1.45346416632329,0.282328141245992,0.592302255241736,0.548783918618318,0.789209134313529,0.407412341537585,0.561142271657738,0.711810108745045,0.394017929502254,0.409231043169689,0.77468420592983,0,0.249810577937946,0.935726433781634,0.644613162144895,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,2.11596391708813,1.26766280701236,0,0,0,0,0,0.299600110518405,0,2.07379224616955,2.16009501330705,2.10324961351382,1.99955689082663,1.98781686856452,5.14461356702807,5.07980996396653,1.83843757322004,1.10115880999389,2.042997409363,2.15049146558741,2.1101806036831,3.47653045689157,1.56274011167028,0.279182999001381,2.25105044012672,1.68078072554491,1.76777151284201,1.85083185038834,2.42319279572891,0,0,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,2.69623150928681,5.03250663100489,4.64921102817598,7.12679712788333,6.39288643325826,1.45451631191692,2.27137768294861,0,0,0,0,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0.2562274405697,0.281105173679186,0,0.215567992932842,1.13463648100692,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0.473489471170421,0,0.308534225774757,0,0,0,0,0,0.0810688095458557,0,0,0,9.2527577368216,6.5858951922742,0,0,0.213288250535234,0.232236671860439,0.77320476793256,0.403367049246685,0.444756087689741,0,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51593129416388,0.488894929326078,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,1.28440471990234,1.40654023910644,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,1.16902343164525,0.790575555893047,3.85585579706168,0,0.35613120733451,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,0.646793418913773,0.214337035031592,0.532020700926821,0.356737635204141,0.493647061806363,0.304464949114599,0,0,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.406638934253697,0.324016022465404,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0.410843828659309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,6.21227026878773,3.68260189205742,4.58316410751517,2.749650917499,2.05524755931193,6.7985450765073,0.675022500231806,2.70192721934532,2.71885445390523,4.14208249401456,2.49089634202024,2.39414924040619,2.21953687480374,0.243106717068294,0.838452650511929,0.367687016900028,1.33348036680969,0.618105171716683,2.56735367673452,0,0.760437899670719,1.13175804831646,0.468207537349412,0.640251524048693,1.09127391015665,0.476293691283074,0.695305955669133,0.192909220463705,0,0.147198920134397,0.342869252385415,0.70990322463735,0.476872379894642,1.45346416632329,0.282328141245992,0.592302255241736,0.548783918618318,0.789209134313529,0.407412341537585,0.561142271657738,0.711810108745045,0.394017929502254,0.409231043169689,0.77468420592983,0,0.249810577937946,0.935726433781634,0.644613162144895,0,0,0
|short_description=p5@Lmo3
|short_description=p5@Lmo3
}}
}}

Latest revision as of 20:57, 26 September 2015

Short description:p5@Lmo3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Lmo3_5end
Coexpression cluster:MCL_coexpression_mm9:708
Association with transcript: 46bp_to_ENSMUST00000163065_5end
EntrezGene:Lmo3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Lmo3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.14
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.08
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D57.13
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E89.25
hippocampus, neonate N00.CNhs11228.627-43G16.59
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I82.49
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter3.62e-4134
regional part of nervous system1.85e-3854
central nervous system3.38e-3673
neural tube8.55e-3652
neural rod8.55e-3652
future spinal cord8.55e-3652
neural keel8.55e-3652
nervous system6.23e-3575
brain grey matter3.79e-3429
regional part of telencephalon3.79e-3429
telencephalon3.79e-3429
brain1.55e-2947
future brain1.55e-2947
anterior neural tube3.43e-2940
regional part of brain5.02e-2846
regional part of forebrain1.03e-2739
forebrain1.03e-2739
future forebrain1.03e-2739
neurectoderm3.18e-2764
neural plate3.18e-2764
presumptive neural plate3.18e-2764
ectoderm-derived structure1.49e-2695
ectoderm1.49e-2695
presumptive ectoderm1.49e-2695
cerebral cortex4.29e-2521
cerebral hemisphere4.29e-2521
pallium4.29e-2521
ecto-epithelium4.76e-2473
pre-chordal neural plate2.48e-2249
regional part of cerebral cortex3.36e-1917
structure with developmental contribution from neural crest4.94e-1792
occipital lobe4.62e-1410
visual cortex4.62e-1410
neocortex4.62e-1410
tube6.32e-12114
anatomical conduit2.72e-11122
basal ganglion6.35e-108
nuclear complex of neuraxis6.35e-108
aggregate regional part of brain6.35e-108
collection of basal ganglia6.35e-108
cerebral subcortex6.35e-108
spinal cord4.76e-096
dorsal region element4.76e-096
dorsum4.76e-096
corpus striatum5.93e-095
striatum5.93e-095
ventral part of telencephalon5.93e-095
future corpus striatum5.93e-095
regional part of spinal cord6.39e-085
gray matter of spinal cord6.39e-085
organ system subdivision6.44e-08194
posterior neural tube5.40e-0712
chordal neural plate5.40e-0712
Ammon's horn8.70e-077
lobe parts of cerebral cortex8.70e-077
hippocampal formation8.70e-077
limbic system8.70e-077
limbic lobe8.70e-077
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