FFCP PHASE1:Mm9::chr12:105583571..105583582,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=128 | |MCL_coexpression_id=128 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:105583571..105583582,+ | |||
|description=CAGE_peak_at_chr12:105583571..105583582,+ | |description=CAGE_peak_at_chr12:105583571..105583582,+ | ||
|id=chr12:105583571..105583582,+ | |id=chr12:105583571..105583582,+ | ||
|ontology_enrichment_celltype=CL:0000181!9.94e-29!5;CL:0000417!9.94e-29!5;CL:0000668!9.94e-29!5;CL:0000412!9.94e-29!5;CL:0000182!9.94e-29!5;CL:0000414!4.83e-13!11;CL:0000057!4.10e-07!1;CL:0000632!4.10e-07!1;CL:0000223!4.14e-07!20 | |ontology_enrichment_celltype=CL:0000181!9.94e-29!5;CL:0000417!9.94e-29!5;CL:0000668!9.94e-29!5;CL:0000412!9.94e-29!5;CL:0000182!9.94e-29!5;CL:0000414!4.83e-13!11;CL:0000057!4.10e-07!1;CL:0000632!4.10e-07!1;CL:0000223!4.14e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.77e-32,5;CL:0000057,3.65e-11,1;CL:0000632,3.65e-11,1;CL:0000223,2.36e-08,20;CL:0000066,9.72e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.52e-24!22;UBERON:0007499!1.52e-24!22;UBERON:0006925!1.52e-24!22;UBERON:0009497!1.52e-24!22;UBERON:0000015!1.52e-24!22;UBERON:0002423!1.52e-24!22;UBERON:0006235!1.52e-24!22;UBERON:0008835!1.52e-24!22;UBERON:0003894!1.52e-24!22;UBERON:0004161!1.52e-24!22;UBERON:0008836!1.52e-24!22;UBERON:0009854!1.99e-23!23;UBERON:0009856!1.99e-23!23;UBERON:0002365!1.85e-21!25;UBERON:0002330!1.85e-21!25;UBERON:0005256!4.42e-13!47;UBERON:0005172!1.73e-12!49;UBERON:0005173!1.73e-12!49;UBERON:0002417!1.73e-12!49;UBERON:0000916!1.73e-12!49;UBERON:0003914!8.00e-11!47;UBERON:0002368!6.30e-10!60;UBERON:0005057!7.17e-10!51;UBERON:0003929!4.68e-09!55;UBERON:0002530!4.78e-09!65;UBERON:0009569!6.91e-09!66;UBERON:0000949!5.10e-08!72;UBERON:0000490!2.55e-07!66;UBERON:0005911!6.08e-07!69;UBERON:0002405!8.00e-07!70 | |ontology_enrichment_uberon=UBERON:0002107!1.52e-24!22;UBERON:0007499!1.52e-24!22;UBERON:0006925!1.52e-24!22;UBERON:0009497!1.52e-24!22;UBERON:0000015!1.52e-24!22;UBERON:0002423!1.52e-24!22;UBERON:0006235!1.52e-24!22;UBERON:0008835!1.52e-24!22;UBERON:0003894!1.52e-24!22;UBERON:0004161!1.52e-24!22;UBERON:0008836!1.52e-24!22;UBERON:0009854!1.99e-23!23;UBERON:0009856!1.99e-23!23;UBERON:0002365!1.85e-21!25;UBERON:0002330!1.85e-21!25;UBERON:0005256!4.42e-13!47;UBERON:0005172!1.73e-12!49;UBERON:0005173!1.73e-12!49;UBERON:0002417!1.73e-12!49;UBERON:0000916!1.73e-12!49;UBERON:0003914!8.00e-11!47;UBERON:0002368!6.30e-10!60;UBERON:0005057!7.17e-10!51;UBERON:0003929!4.68e-09!55;UBERON:0002530!4.78e-09!65;UBERON:0009569!6.91e-09!66;UBERON:0000949!5.10e-08!72;UBERON:0000490!2.55e-07!66;UBERON:0005911!6.08e-07!69;UBERON:0002405!8.00e-07!70 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.33e-28,22;UBERON:0007499,4.33e-28,22;UBERON:0006925,4.33e-28,22;UBERON:0009497,4.33e-28,22;UBERON:0000015,4.33e-28,22;UBERON:0002423,4.33e-28,22;UBERON:0006235,4.33e-28,22;UBERON:0008835,4.33e-28,22;UBERON:0003894,4.33e-28,22;UBERON:0004161,4.33e-28,22;UBERON:0008836,4.33e-28,22;UBERON:0009854,7.24e-27,23;UBERON:0009856,7.24e-27,23;UBERON:0002365,1.03e-24,25;UBERON:0002330,1.03e-24,25;UBERON:0005256,1.15e-13,45;UBERON:0003914,4.47e-13,47;UBERON:0005172,1.56e-12,49;UBERON:0005173,1.56e-12,49;UBERON:0002417,1.56e-12,49;UBERON:0000916,1.56e-12,49;UBERON:0003929,3.87e-11,55;UBERON:0002368,3.46e-10,60;UBERON:0003104,5.14e-10,61;UBERON:0009142,5.14e-10,61;UBERON:0002530,2.22e-09,65;UBERON:0000490,3.11e-09,66;UBERON:0009569,3.11e-09,66;UBERON:0005911,8.11e-09,69;UBERON:0000949,1.95e-08,72;UBERON:0005177,1.17e-07,79;UBERON:0001041,1.48e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,9.46466264679525,8.83962733820076,14.0322829825832,28.5901623676974,12.9927797258227,0.702222100658759,0,0,0,0,0,0,0,0,0,0,5.25245846707676,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77871576252289,0,0,0,0,0,0,0,0,0,0,0,0,0.505157755894224,2.69096120282868,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,9.46466264679525,8.83962733820076,14.0322829825832,28.5901623676974,12.9927797258227,0.702222100658759,0,0,0,0,0,0,0,0,0,0,5.25245846707676,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77871576252289,0,0,0,0,0,0,0,0,0,0,0,0,0.505157755894224,2.69096120282868,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | ||
|short_description=p@chr12:105583571..105583582,+ | |short_description=p@chr12:105583571..105583582,+ | ||
}} | }} |
Latest revision as of 15:30, 4 August 2015
Short description: | p@chr12:105583571..105583582, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:105583571..105583582, + |
Coexpression cluster: | MCL_coexpression_mm9:128 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.77e-32 | 5 |
fibroblast | 3.65e-11 | 1 |
hepatic stellate cell | 3.65e-11 | 1 |
endodermal cell | 2.36e-08 | 20 |
epithelial cell | 9.72e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
liver | 4.33e-28 | 22 |
epithelial sac | 4.33e-28 | 22 |
digestive gland | 4.33e-28 | 22 |
epithelium of foregut-midgut junction | 4.33e-28 | 22 |
anatomical boundary | 4.33e-28 | 22 |
hepatobiliary system | 4.33e-28 | 22 |
foregut-midgut junction | 4.33e-28 | 22 |
hepatic diverticulum | 4.33e-28 | 22 |
liver primordium | 4.33e-28 | 22 |
septum transversum | 4.33e-28 | 22 |
liver bud | 4.33e-28 | 22 |
digestive tract diverticulum | 7.24e-27 | 23 |
sac | 7.24e-27 | 23 |
exocrine gland | 1.03e-24 | 25 |
exocrine system | 1.03e-24 | 25 |
trunk mesenchyme | 1.15e-13 | 45 |
epithelial tube | 4.47e-13 | 47 |
abdomen element | 1.56e-12 | 49 |
abdominal segment element | 1.56e-12 | 49 |
abdominal segment of trunk | 1.56e-12 | 49 |
abdomen | 1.56e-12 | 49 |
gut epithelium | 3.87e-11 | 55 |
endocrine gland | 3.46e-10 | 60 |
mesenchyme | 5.14e-10 | 61 |
entire embryonic mesenchyme | 5.14e-10 | 61 |
gland | 2.22e-09 | 65 |
unilaminar epithelium | 3.11e-09 | 66 |
subdivision of trunk | 3.11e-09 | 66 |
endo-epithelium | 8.11e-09 | 69 |
endocrine system | 1.95e-08 | 72 |
trunk region element | 1.17e-07 | 79 |
foregut | 1.48e-07 | 80 |