FFCP PHASE1:Hg19::chr2:33171944..33171945,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:33171944..33171945,+
|short_description=p15@LTBP1
|description=CAGE_peak_15_at_LTBP1_5end
|association_with_transcript=-93bp_to_ENST00000404816_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4052 | |EntrezGene=4052 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6714 | |HGNC=6714 | ||
|TSSclassifier=strong | |||
|UniProt=Q14766 | |UniProt=Q14766 | ||
|association_with_transcript=-93bp_to_ENST00000404816_5end | |||
|cluster_id=chr2:33171944..33171945,+ | |||
|description=CAGE_peak_15_at_LTBP1_5end | |||
|id=chr2:33171944..33171945,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000054;4.66e-21;2!CL:0002593;4.66e-21;2!CL:0000137;4.66e-21;2!CL:0000092;4.66e-21;2!CL:0002595;2.97e-09;5!CL:0002188;2.97e-09;5!CL:0000197;6.33e-08;6!CL:0000098;6.33e-08;6!CL:0002167;6.33e-08;6!CL:1000746;5.70e-07;7!CL:1000612;5.70e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,5.70e-21,2;CL:0000137,5.70e-21,2;CL:0000092,5.70e-21,2;CL:0002593,6.96e-21,2;CL:0002188,2.53e-09,5;CL:0002595,3.49e-09,5;CL:0000197,6.34e-08,6;CL:0000098,6.34e-08,6;CL:0002167,6.34e-08,6;CL:1000746,5.08e-07,7;CL:1000612,5.08e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.48e-40;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:200;4.66e-21;2!DOID:4305;4.66e-21;2!DOID:201;6.33e-08;6!DOID:0060100;6.33e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:200,5.70e-21,2;DOID:4305,5.70e-21,2;DOID:201,6.78e-08,6;DOID:0060100,6.78e-08,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;1.48e-40;1!UBERON:0002081;4.66e-21;2!UBERON:0002456;4.66e-21;2!UBERON:0004151;1.60e-14;3!UBERON:0003834;2.97e-09;5!UBERON:0001533;2.97e-09;5!UBERON:0003513;5.70e-07;7!UBERON:0000074;5.70e-07;7!UBERON:0001229;5.70e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,9.91e-41,1;UBERON:0002081,3.81e-21,2;UBERON:0010227,3.81e-21,2;UBERON:0002456,6.96e-21,2;UBERON:0004151,1.40e-14,3;UBERON:0003834,3.49e-09,5;UBERON:0001533,3.49e-09,5;UBERON:0010532,5.08e-07,7;UBERON:0000074,5.08e-07,7;UBERON:0001229,5.08e-07,7;UBERON:0001230,5.08e-07,7;UBERON:0003220,5.08e-07,7;UBERON:0005749,5.08e-07,7;UBERON:0004199,5.08e-07,7;UBERON:0004209,5.08e-07,7;UBERON:0004198,5.08e-07,7;UBERON:0003513,6.39e-07,7 | |||
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| ||
|short_description=p15@LTBP1 | |||
}} | }} |
Latest revision as of 23:34, 16 September 2015
Short description: | p15@LTBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_LTBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -93bp_to_ENST00000404816_5end |
EntrezGene: | LTBP1 |
HGNC: | 6714 |
UniProt: | Q14766 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 5.70e-21 | 2 |
osteocyte | 5.70e-21 | 2 |
osteoclast | 5.70e-21 | 2 |
smooth muscle cell of the internal thoracic artery | 6.96e-21 | 2 |
glomerular endothelial cell | 2.53e-09 | 5 |
smooth muscle cell of the subclavian artery | 3.49e-09 | 5 |
receptor cell | 6.34e-08 | 6 |
sensory epithelial cell | 6.34e-08 | 6 |
olfactory epithelial cell | 6.34e-08 | 6 |
glomerular cell | 5.08e-07 | 7 |
kidney corpuscule cell | 5.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 9.91e-41 | 1 |
cardiac atrium | 3.81e-21 | 2 |
future cardiac atrium | 3.81e-21 | 2 |
internal thoracic artery | 6.96e-21 | 2 |
cardiac chamber | 1.40e-14 | 3 |
thoracic segment blood vessel | 3.49e-09 | 5 |
subclavian artery | 3.49e-09 | 5 |
primitive nephron | 5.08e-07 | 7 |
renal glomerulus | 5.08e-07 | 7 |
renal corpuscle | 5.08e-07 | 7 |
glomerular capsule | 5.08e-07 | 7 |
metanephric mesenchyme | 5.08e-07 | 7 |
glomerular tuft | 5.08e-07 | 7 |
S-shaped body | 5.08e-07 | 7 |
renal vesicle | 5.08e-07 | 7 |
comma-shaped body | 5.08e-07 | 7 |
trunk blood vessel | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 5.70e-21 | 2 |
bone giant cell tumor | 5.70e-21 | 2 |
connective tissue cancer | 6.78e-08 | 6 |
musculoskeletal system cancer | 6.78e-08 | 6 |