FFCP PHASE1:Hg19::chr2:81710247..81710252,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:81710247..81710252,+
|short_description=p@chr2:81710247..81710252,+
|description=CAGE_peak_at_chr2:81710247..81710252,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:81710247..81710252,+ | |||
|coexpression_cluster_id=C4246 | |||
|description=CAGE_peak_at_chr2:81710247..81710252,+ | |||
|id=chr2:81710247..81710252,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000415;7.45e-16;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,8.04e-16,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.78e-25!235;DOID:0050687!1.61e-24!143;DOID:14566!2.27e-24!239;DOID:305!2.03e-20!106;DOID:1749!2.13e-13!14 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.34e-15;2!DOID:0060085;2.20e-08;1!DOID:3165;2.20e-08;1!DOID:3151;2.20e-08;1!DOID:0060121;2.20e-08;1!DOID:2438;2.20e-08;1!DOID:4418;2.20e-08;1!DOID:3149;2.20e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.47e-16,235;DOID:14566,9.30e-16,239;DOID:1909,1.67e-15,2;DOID:0050687,7.97e-13,143;DOID:3151,1.27e-08,1;DOID:3149,1.27e-08,1;DOID:0060085,1.37e-08,1;DOID:3165,1.37e-08,1;DOID:0060121,1.37e-08,1;DOID:2438,1.37e-08,1;DOID:4418,1.37e-08,1;DOID:305,1.35e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.40e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002110;7.12e-11;3!UBERON:0002294;5.96e-10;7!UBERON:0001173;5.96e-10;7!UBERON:0001282;2.20e-08;1!UBERON:0009842;2.20e-08;1!UBERON:0003704;2.20e-08;1!UBERON:0001171;2.20e-08;1!UBERON:0001172;2.20e-08;1!UBERON:0000014;5.61e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,7.49e-11,3;UBERON:0006242,7.49e-11,3;UBERON:0001282,1.48e-08,1;UBERON:0009842,1.48e-08,1;UBERON:0003704,1.48e-08,1;UBERON:0001171,1.48e-08,1;UBERON:0001172,1.48e-08,1;UBERON:0000014,3.41e-08,4;UBERON:0002294,6.91e-08,9;UBERON:0001173,6.91e-08,9;UBERON:0004912,6.91e-08,9 | |||
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| ||
|short_description=p@chr2:81710247..81710252,+ | |||
}} | }} |
Latest revision as of 12:33, 29 July 2015
Short description: | p@chr2:81710247..81710252, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:81710247..81710252, + |
Coexpression cluster: | C4246_colon_melanoma_cholangiocellular_gall_maxillary_chronic_oral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 8.04e-16 | 2 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 7.49e-11 | 3 |
gall bladder primordium | 7.49e-11 | 3 |
intralobular bile duct | 1.48e-08 | 1 |
acinus | 1.48e-08 | 1 |
intrahepatic bile duct | 1.48e-08 | 1 |
portal lobule | 1.48e-08 | 1 |
hepatic acinus | 1.48e-08 | 1 |
zone of skin | 3.41e-08 | 4 |
biliary system | 6.91e-08 | 9 |
biliary tree | 6.91e-08 | 9 |
biliary bud | 6.91e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.47e-16 | 235 |
disease of cellular proliferation | 9.30e-16 | 239 |
melanoma | 1.67e-15 | 2 |
cell type cancer | 7.97e-13 | 143 |
skin squamous cell carcinoma | 1.27e-08 | 1 |
keratoacanthoma | 1.27e-08 | 1 |
organ system benign neoplasm | 1.37e-08 | 1 |
skin benign neoplasm | 1.37e-08 | 1 |
integumentary system benign neoplasm | 1.37e-08 | 1 |
dermis tumor | 1.37e-08 | 1 |
cutaneous fibrous histiocytoma | 1.37e-08 | 1 |
carcinoma | 1.35e-07 | 106 |