FFCP PHASE1:Hg19::chr5:142783175..142783297,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2908 | |EntrezGene=2908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7978 | |HGNC=7978 | ||
|TSSclassifier=strong | |||
|UniProt=F8W959,P04150,F1D8N4,E5KQF5,E5KQF6 | |UniProt=F8W959,P04150,F1D8N4,E5KQF5,E5KQF6 | ||
|association_with_transcript=0bp_to_ENST00000231509,ENST00000361001,ENST00000394464,NM_000176,NM_001020825,NM_001024094,NM_001204258,NM_001204259,NM_001204260,NM_001204261,NM_001204262,NM_001204263,NM_001204264,NM_001204265,uc003lmy.2,uc003lmz.2,uc003lna.2_5end | |association_with_transcript=0bp_to_ENST00000231509,ENST00000361001,ENST00000394464,NM_000176,NM_001020825,NM_001024094,NM_001204258,NM_001204259,NM_001204260,NM_001204261,NM_001204262,NM_001204263,NM_001204264,NM_001204265,uc003lmy.2,uc003lmz.2,uc003lna.2_5end | ||
|cluster_id=chr5:142783175..142783297,- | |||
|description=CAGE_peak_1_at_NR3C1_5end | |description=CAGE_peak_1_at_NR3C1_5end | ||
|id=chr5:142783175..142783297,- | |id=chr5:142783175..142783297,- |
Latest revision as of 07:41, 25 September 2015
Short description: | p1@NR3C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NR3C1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000231509, ENST00000361001, ENST00000394464, NM_000176, NM_001020825, NM_001024094, NM_001204258, NM_001204259, NM_001204260, NM_001204261, NM_001204262, NM_001204263, NM_001204264, NM_001204265, uc003lmy.2, uc003lmz.2, uc003lna.2_5end |
EntrezGene: | NR3C1 |
HGNC: | 7978 |
UniProt: | F8W959P04150F1D8N4E5KQF5E5KQF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@NR3C1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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myeloid leukocyte | 5.52e-18 | 72 |
classical monocyte | 3.99e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.99e-17 | 42 |
mesenchymal cell | 3.98e-16 | 354 |
leukocyte | 1.31e-15 | 136 |
connective tissue cell | 2.84e-15 | 361 |
myeloid lineage restricted progenitor cell | 2.91e-15 | 66 |
granulocyte monocyte progenitor cell | 8.03e-15 | 67 |
defensive cell | 2.95e-14 | 48 |
phagocyte | 2.95e-14 | 48 |
Showing 1 to 10 of 27 entries
Ontology term | p-value | n |
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hematopoietic system | 9.59e-18 | 98 |
blood island | 9.59e-18 | 98 |
connective tissue | 3.55e-15 | 371 |
hemolymphoid system | 3.09e-13 | 108 |
bone marrow | 3.98e-13 | 76 |
bone element | 1.23e-11 | 82 |
skeletal system | 3.21e-11 | 100 |
skeletal element | 3.38e-10 | 90 |
immune system | 5.12e-10 | 93 |
musculoskeletal system | 8.20e-09 | 167 |
Showing 1 to 10 of 11 entries