FFCP PHASE1:Hg19::chr4:15005235..15005252,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:15005235..15005252,+
|short_description=p5@CPEB2
|description=CAGE_peak_5_at_CPEB2_5end
|association_with_transcript=-269bp_to_ENST00000345451,ENST00000507...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=132864 | |EntrezGene=132864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21745 | |HGNC=21745 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z5Q1 | |UniProt=Q7Z5Q1 | ||
|association_with_transcript=-269bp_to_ENST00000345451,ENST00000507071,uc003gni.1,uc003gnj.1,uc003gnk.1,uc003gnl.1,uc003gnm.1,uc003gnn.1_5end | |||
|cluster_id=chr4:15005235..15005252,+ | |||
|description=CAGE_peak_5_at_CPEB2_5end | |||
|id=chr4:15005235..15005252,+ | |||
|ontology_enrichment_celltype=CL:0000766!6.00e-10!76;CL:0000738!7.48e-09!140;CL:0000557!8.77e-09!71;CL:0000839!8.99e-08!70;CL:0002009!1.62e-07!65;CL:0002194!7.88e-07!63;CL:0000576!7.88e-07!63;CL:0000040!7.88e-07!63;CL:0000559!7.88e-07!63;CL:0002057!9.53e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.31e-20;3!CL:0002567;5.77e-20;3!CL:0000094;1.84e-13;8!CL:0000097;4.08e-12;5!CL:0000148;2.15e-10;10!CL:0000081;8.08e-10;11!CL:0000147;1.89e-07;14!CL:0000163;6.24e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.04e-20,3;CL:0002567,6.39e-20,3;CL:0000094,1.62e-13,8;CL:0000097,3.72e-12,5;CL:0002028,3.72e-12,5;CL:0000148,1.91e-10,10;CL:0000541,1.91e-10,10;CL:0000081,7.40e-10,11;CL:0000147,1.74e-07,14;CL:0000766,4.42e-07,72;CL:0000163,5.94e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.74e-07;1!UBERON:0005425;1.74e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.29e-08!115;UBERON:0004765!6.12e-08!101;UBERON:0001434!6.12e-08!101;UBERON:0002371!8.75e-08!80;UBERON:0001474!7.34e-07!86;UBERON:0002390!8.56e-07!102;UBERON:0003061!8.56e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;7.02e-08;1!UBERON:0006518;7.02e-08;1!UBERON:0008949;7.02e-08;1!UBERON:0000101;7.02e-08;1!UBERON:0002167;7.02e-08;1!UBERON:0000998;1.74e-07;1!UBERON:0000941;1.74e-07;1!UBERON:0001785;1.74e-07;1!UBERON:0002464;1.74e-07;1!UBERON:0004904;1.74e-07;1!UBERON:0006868;1.74e-07;1!UBERON:0001021;1.74e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,8.84e-08,1;UBERON:0006518,8.84e-08,1;UBERON:0008949,8.84e-08,1;UBERON:0000101,8.84e-08,1;UBERON:0002167,8.84e-08,1;UBERON:0000941,1.22e-07,1;UBERON:0001785,1.22e-07,1;UBERON:0002464,1.22e-07,1;UBERON:0004904,1.22e-07,1;UBERON:0001021,1.22e-07,1;UBERON:0003902,1.22e-07,1;UBERON:0005425,1.22e-07,1;UBERON:0000998,1.48e-07,1;UBERON:0006868,1.48e-07,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,1.26343974685366,0,0,0,0,0,0,0.662794751455832,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0.383829398097213,0,0,0.30120591877825,0,0,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0.895661896959697,1.29557466407592,0,0.436194716338694,0.755751887377619,0.485168122375632,0.464858073811369,1.23350366406548,0.619412741790207,0.28769239232215,0,0.236482229888585,0.689491361473237,0.645484683583826,0,0.564727018627814,0.818718450173537,0.449446968890169,0.612167784741805,0.320929027076094,0.639337125799041,0.329851300186716,0,0,0,0,0.622822248995575,0,0,0,0.605399502633369,0,0,0,0.637812899895131,0,0.22465726229299,0.750884464207532,0.16072558669708,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.403213486449465,1.06976078313403,0.144824403882799,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0,0,0,0.696518949197069,0.26591592103773,0,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0,2.63560834872127,0,0,0,0.379891534993739,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0.122834317311768,0.103325781175765,0,0.741800787835671,0,0,0,0,0.554128230968366,0.438977620880838,0.612975591598039,0.45071417671979,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0.0974370051611986,0.252433774244115,0,0.161646056818812,0,0,0,0.193260853163297,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0.283550194484773,0.0895585227028483,0,0,0,0.352193736052904,2.48793738648926,1.29707958075265,2.5248486685276,0.317489471460845,2.67391897890794,1.17217447210047,3.4214489204541,0.102827492703324,0,1.42913216315289,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,2.10833939483032,0.718874566474748,0,0,0,0.205476322550383,0,0,0.591092280605782,0.431255149719035,0.385029108839245,0.254094624222463,0,0,0,0,4.49404214368309,2.99161459204025,7.87389475528467,0.36807447515742,0,0,0.415941723061614,0,0.315404830067869,0.234282829985426,1.20378439891088,0,0,0.664225598535437,0.553107505625109,0.173767228936166,0.391602314925481,0.343143423810856,0.206768026122887,0.647142602455851,0.320182673410333,0.606255142892519,0,0,0,0,0,0.128139149255701,0.511707249066704,0.321707842287215,0,0,0,0.164254312027618,0,0,0,0.200506470303285,0.276242966807689,0.114814448164607,0,0.393373244878272,0,0,0,0,0,1.13733384070897,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0.386682873168488,0,0,0.137836572484531,0,0,0.170453254832202,0,0.330569830721956,0,0,0.2023155617111,1.85938219718914,1.25924938732256,0,0.308033580176089,0,0,0,0,0.372158369359667,0.632758849437452,0.190630193923825,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0.280797178113459,0,0.313359791546046,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0.879049075631364,0,0.222886768554957,0,0.71623345421307,0.593929361665277,0,0,0,0.445234820091624,0,0,0,0.276283915531148,0,0.102268682502155,0.123084805461069,0,0,0.358042349351218,0,0.493217028184668,0,0,2.90799823828566,0.371072392647405,0,0,0.0874599999961957,0.724999575434793,0,0,0,0,0.291604613383254,0.173624994933292,0,0.241192877250816,1.52581736317083,0,0.295547618953547,0.438770794307945,0,0,0.153900517007594,0.113942055847001,0,0,0,0.31900115973192,0.915975934018623,1.06606955203727,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0.707660516026713,0,0,0,0.104421949505455,0.269604531922708,0,0.468528891450678,0,0,0,0.789168805698781,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0.343972064943233,0.0967563312890851,0,0,0.775912131907355,0,0,0,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0.85381197895741,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0.600420288709789,0.273810757783986,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0.446342914883745,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0.275078873194468,0,0.2249738915515,0.77380195455795,0.121499113316049,0,0.472834243795189,0.0524545881349981,0.105600336519406,0.179287339332845,0,0.714695326373367,0,0,0.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| ||
|short_description=p5@CPEB2 | |||
}} | }} |
Latest revision as of 01:05, 16 September 2015
Short description: | p5@CPEB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CPEB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -269bp_to_ENST00000345451, ENST00000507071, uc003gni.1, uc003gnj.1, uc003gnk.1, uc003gnl.1, uc003gnm.1, uc003gnn.1_5end |
EntrezGene: | CPEB2 |
HGNC: | 21745 |
UniProt: | Q7Z5Q1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.04e-20 | 3 |
light melanocyte | 6.39e-20 | 3 |
granulocyte | 1.62e-13 | 8 |
mast cell | 3.72e-12 | 5 |
basophil mast progenitor cell | 3.72e-12 | 5 |
melanocyte | 1.91e-10 | 10 |
melanoblast | 1.91e-10 | 10 |
blood cell | 7.40e-10 | 11 |
pigment cell | 1.74e-07 | 14 |
myeloid leukocyte | 4.42e-07 | 72 |
endocrine cell | 5.94e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 8.84e-08 | 1 |
right lung lobe | 8.84e-08 | 1 |
lower lobe of lung | 8.84e-08 | 1 |
lobe of lung | 8.84e-08 | 1 |
right lung | 8.84e-08 | 1 |
cranial nerve II | 1.22e-07 | 1 |
cranial nerve | 1.22e-07 | 1 |
nerve trunk | 1.22e-07 | 1 |
nerve connecting eye with brain | 1.22e-07 | 1 |
nerve | 1.22e-07 | 1 |
retinal neural layer | 1.22e-07 | 1 |
presumptive neural retina | 1.22e-07 | 1 |
seminal vesicle | 1.48e-07 | 1 |
seminal fluid secreting gland | 1.48e-07 | 1 |