FFCP PHASE1:Hg19::chr4:42658957..42658974,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:42658957..42658974,-
|short_description=p5@ATP8A1
|description=CAGE_peak_5_at_ATP8A1_5end
|association_with_transcript=135bp_to_ENST00000264449,ENST0000051...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10396 | |EntrezGene=10396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13531 | |HGNC=13531 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2Q0,Q4G1C1 | |UniProt=Q9Y2Q0,Q4G1C1 | ||
|association_with_transcript=135bp_to_ENST00000264449,ENST00000510289_5end | |||
|cluster_id=chr4:42658957..42658974,- | |||
|coexpression_cluster_id=C4415 | |||
|description=CAGE_peak_5_at_ATP8A1_5end | |||
|id=chr4:42658957..42658974,- | |||
|ontology_enrichment_celltype=CL:0000542!1.84e-21!53;CL:0000051!1.84e-21!53;CL:0000838!5.48e-21!52;CL:0000738!1.27e-14!140;CL:0002087!1.79e-12!119;CL:0000988!4.09e-12!182;CL:0000037!5.20e-12!172;CL:0000566!5.20e-12!172;CL:0000084!4.65e-11!25;CL:0000827!4.65e-11!25;CL:0000791!4.96e-11!18;CL:0000789!4.96e-11!18;CL:0002420!4.96e-11!18;CL:0002419!4.96e-11!18;CL:0000790!4.96e-11!18;CL:0002032!5.58e-10!165;CL:0000837!5.58e-10!165;CL:0002031!5.91e-10!124;CL:0000625!1.14e-08!11;CL:0000945!1.22e-08!24;CL:0000826!1.22e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.21e-16;53!CL:0000084;2.75e-15;25!CL:0000625;1.70e-14;11!CL:0000791;2.94e-14;18!CL:0000789;2.94e-14;18!CL:0002419;2.94e-14;18!CL:0000623;2.89e-08;3!CL:0000945;9.16e-08;24!CL:0000784;4.72e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.80e-26,52;CL:0000542,2.59e-25,53;CL:0000051,2.59e-25,53;CL:0000084,1.57e-15,25;CL:0000827,1.57e-15,25;CL:0000625,1.40e-14,11;CL:0000791,1.42e-14,18;CL:0000789,1.42e-14,18;CL:0002420,1.42e-14,18;CL:0002419,1.42e-14,18;CL:0000790,1.42e-14,18;CL:0000738,2.23e-14,136;CL:0000988,1.39e-13,177;CL:0000037,4.74e-12,168;CL:0002087,1.71e-11,115;CL:0002032,7.73e-10,161;CL:0000837,7.73e-10,161;CL:0002031,8.72e-10,120;CL:0000623,2.91e-08,3;CL:0000825,2.91e-08,3;CL:0000945,1.12e-07,24;CL:0000826,1.12e-07,24;CL:0000784,7.44e-07,3;CL:0000898,8.97e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.21e-16;53!CL:0000790;2.94e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.70e-36!115;UBERON:0003080!1.45e-27!42;UBERON:0002780!6.13e-27!41;UBERON:0001890!6.13e-27!41;UBERON:0006240!6.13e-27!41;UBERON:0001049!9.79e-27!57;UBERON:0005068!9.79e-27!57;UBERON:0006241!9.79e-27!57;UBERON:0007135!9.79e-27!57;UBERON:0002616!1.13e-22!59;UBERON:0001893!7.34e-22!34;UBERON:0002020!2.03e-21!34;UBERON:0003528!2.03e-21!34;UBERON:0002791!5.01e-21!33;UBERON:0001869!8.34e-21!32;UBERON:0001017!2.85e-19!82;UBERON:0000955!2.89e-19!69;UBERON:0006238!2.89e-19!69;UBERON:0005743!2.92e-18!86;UBERON:0000073!3.46e-18!94;UBERON:0001016!3.46e-18!94;UBERON:0003075!6.63e-18!86;UBERON:0007284!6.63e-18!86;UBERON:0002619!2.87e-17!22;UBERON:0003056!7.20e-17!61;UBERON:0002346!2.79e-16!90;UBERON:0001950!1.59e-15!20;UBERON:0000956!2.83e-14!25;UBERON:0000203!2.83e-14!25;UBERON:0002420!7.32e-10!9;UBERON:0007245!7.32e-10!9;UBERON:0010009!7.32e-10!9;UBERON:0010011!7.32e-10!9;UBERON:0000454!7.32e-10!9;UBERON:0002308!7.13e-09!9;UBERON:0000125!7.13e-09!9;UBERON:0000153!2.07e-08!129;UBERON:0007811!2.07e-08!129;UBERON:0009663!4.66e-08!7;UBERON:0000200!3.91e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.21e-35;32!UBERON:0002791;3.81e-33;32!UBERON:0001893;9.26e-33;34!UBERON:0002619;2.25e-30;22!UBERON:0003528;3.25e-30;34!UBERON:0002020;3.25e-30;34!UBERON:0002780;4.09e-29;41!UBERON:0001890;4.09e-29;41!UBERON:0001950;1.18e-26;20!UBERON:0000956;3.26e-26;25!UBERON:0000203;3.26e-26;25!UBERON:0002420;3.20e-16;9!UBERON:0007245;3.20e-16;9!UBERON:0010009;3.20e-16;9!UBERON:0010011;3.20e-16;9!UBERON:0000454;3.20e-16;9!UBERON:0000073;4.33e-16;53!UBERON:0002616;4.33e-16;53!UBERON:0000200;1.63e-13;6!UBERON:0009663;1.97e-12;7!UBERON:0000349;1.51e-11;5!UBERON:0000955;3.53e-11;68!UBERON:0000369;1.08e-10;4!UBERON:0002435;1.08e-10;4!UBERON:0000204;1.08e-10;4!UBERON:0001017;3.88e-10;75!UBERON:0000125;1.90e-09;9!UBERON:0002308;1.90e-09;9!UBERON:0000178;1.55e-08;15!UBERON:0000179;1.55e-08;15!UBERON:0000463;1.55e-08;15!UBERON:0005383;1.87e-08;3!UBERON:0005382;1.87e-08;3!UBERON:0001871;6.30e-08;6!UBERON:0001872;1.36e-07;5!UBERON:0001870;1.43e-07;3!UBERON:0001016;1.51e-07;83!UBERON:0002021;6.71e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,6.96e-41,41;UBERON:0001890,6.96e-41,41;UBERON:0003080,6.96e-41,41;UBERON:0006240,6.96e-41,41;UBERON:0001869,2.90e-40,32;UBERON:0001893,1.72e-37,34;UBERON:0002791,4.40e-37,32;UBERON:0003528,1.64e-34,34;UBERON:0002020,1.64e-34,34;UBERON:0002619,1.23e-30,22;UBERON:0000073,1.04e-29,53;UBERON:0002616,1.04e-29,53;UBERON:0001049,1.17e-27,56;UBERON:0005068,1.17e-27,56;UBERON:0006241,1.17e-27,56;UBERON:0007135,1.17e-27,56;UBERON:0001950,5.72e-27,20;UBERON:0003056,1.19e-26,61;UBERON:0000956,1.92e-26,25;UBERON:0000203,1.92e-26,25;UBERON:0000955,1.41e-22,68;UBERON:0006238,1.41e-22,68;UBERON:0007023,4.03e-20,114;UBERON:0001017,4.03e-19,81;UBERON:0001016,1.16e-17,89;UBERON:0003075,1.41e-17,82;UBERON:0007284,1.41e-17,82;UBERON:0002346,2.33e-16,86;UBERON:0002420,3.03e-16,9;UBERON:0007245,3.03e-16,9;UBERON:0010009,3.03e-16,9;UBERON:0010011,3.03e-16,9;UBERON:0000454,3.03e-16,9;UBERON:0000200,1.72e-13,6;UBERON:0010371,4.40e-13,104;UBERON:0009663,2.02e-12,7;UBERON:0000349,1.61e-11,5;UBERON:0000369,1.06e-10,4;UBERON:0002435,1.06e-10,4;UBERON:0000204,1.06e-10,4;UBERON:0010082,1.06e-10,4;UBERON:0000125,1.94e-09,9;UBERON:0002308,1.94e-09,9;UBERON:0010314,1.25e-08,132;UBERON:0000178,1.44e-08,15;UBERON:0000179,1.44e-08,15;UBERON:0000463,1.44e-08,15;UBERON:0005383,1.86e-08,3;UBERON:0005382,1.86e-08,3;UBERON:0001871,4.59e-08,6;UBERON:0001872,1.23e-07,5;UBERON:0001870,1.33e-07,3;UBERON:0002021,5.23e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37544130346312,1.23150884174919,1.25937250101887,0.786728553697808,4.98978217526377,1.23852898652861,0,0,0,1.62681121218633,1.27952309238679,0.293600439334847,0.553995408531877,1.40381113229099,1.30206522429511,0,0,0.77272670290256,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0,0,0.689491361473237,0,0,0,0,0.224723484445085,0.612167784741805,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0.400395987036012,1.14950487990897,1.32208974556972,0,4.55370375287559,1.76171156811282,2.6759125968766,1.32171328579026,1.68152568894461,0,0.196709770113833,0,0.822405995998037,0.334372990781356,1.95553359980154,0,0,0.222820913770347,1.47302953737419,0.443067789167242,0.541607727530031,0.25618263945135,0.130059347559878,0.164437904603676,0.552700035571697,0.289803085735052,1.03800594213442,0.267540828089713,0,0.226618685395132,1.91610246800961,0.34362744548263,0.253019692019503,1.27426165729639,1.30216690771284,2.85135613334512,0.602300476311091,2.17577238962511,0,1.65744076430812,1.64225599384209,7.05623601286563,5.34880391567015,6.95157138637435,0,0,0,0,0.50133791063589,0,0,0,0,0,0.263504357079378,0.261958150995425,0,0,0.324547393654683,0.696518949197069,0.664789802594326,2.38490624305342,1.14398982156026,3.34311751196608,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,3.87780264148325,0,0,0,0,0.573673241497627,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,2.46331618947972,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0.112085143993527,6.5020150866636,5.82194452120697,8.47064039446339,0,0,0,0.167516265334349,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,0.215714200818617,3.41528184971022,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,1.52927441428475,0,0.238231775457789,0,0,0.540031437238115,1.58625035258854,0,0,0,0.371606350251437,1.00988449083511,2.77453189058815,0,0,0,0,0,0.561594356226918,1.82587743226554,0,2.50634477090067,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0,0,3.69262196843137,0,0,0,0.18714054040822,0.439524537815682,0,0.111443384277478,0,0,0,0,2.98244294329889,3.09472716103128,0,0,0,0.19924798825107,0.828851746593443,0.503865495708552,0,0.369254416383208,0,0,0,0,0.0986434056369336,4.7896618469388,0,0,3.9890282209596,0,0,0,0.724999575434793,0,0,0,0,0,1.21537496453305,7.97167247232455,26.5312164975897,0,0.221158519862449,0.295547618953547,5.04586413454137,0,0,0.153900517007594,0,0,0,0,0,0,0.533034776018635,1.02193298195737,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0.216388639742091,0,0.442287822516696,0.611030144933625,25.2042959378529,14.4569808567408,16.289824122851,0.606610196826093,0.802577647298789,4.2167600230561,0.364909578431332,0,0,1.57833761139756,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0.0730893170861856,0,0,0,0,0,0,3.8619585533086,0.195551382734803,0,0.213452994739353,0.39961921916426,0,0,0.171594997861965,0,0,0,0,0,0,0,5.4037825983881,2.46429682005587,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0.201550417460179,0,0,0,0,0,0,0,3.18091875923721,2.45166131000836,0.160753148465019,0.137539436597234,0,0,0,4.25246896606173,0,0.157611414598396,0.472091293214983,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.26446520348538,0,0,0.427149650270779,1.25763444079733,0.414239055347196,0,0,0.60896299190448,0,0,0,0,0,0,2.65820453990096,4.51497180137264,4.256491644021,0,0.665574309221114,0.434674820589684,0.138348634936231,0,0,0,0,1.87333962322753,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94511275452442,0,0.265729680626726,0.163565394255844,0,0,0,2.79982354196902,0.106691729694141,0,0,0,0,0,0.511577485214607,0.539124056983409,0,0.327628914576042,0,0,0,0,0,1.10406443001755,0,0,0,8.67094538802204,1.41696576325585,3.51194489925733,1.64093091392604,0.756215088665154,2.62797559364028,4.35984243205998,2.85538840518309,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,2.36381546164381,4.68646859168308,4.75379631952723,2.53663240775627,0.546974809018219,0,0,0,0,1.07140367175657,3.69912094440706,0.606965604236632,0.227662191351298,0.0887023701626388,0.921871900446234,0,0.40781839786099,2.56513816895111,0,0,0.235479278551542,21.2106046386603,0,0.913158720509496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| ||
|short_description=p5@ATP8A1 | |||
}} | }} |
Latest revision as of 20:25, 17 September 2015
Short description: | p5@ATP8A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ATP8A1_5end |
Coexpression cluster: | C4415_caudate_putamen_cord_Natural_CD8_nucleus_Basophils |
Association with transcript: | 135bp_to_ENST00000264449, ENST00000510289_5end |
EntrezGene: | ATP8A1 |
HGNC: | 13531 |
UniProt: | Q9Y2Q0Q4G1C1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.80e-26 | 52 |
lymphocyte | 2.59e-25 | 53 |
common lymphoid progenitor | 2.59e-25 | 53 |
T cell | 1.57e-15 | 25 |
pro-T cell | 1.57e-15 | 25 |
CD8-positive, alpha-beta T cell | 1.40e-14 | 11 |
mature alpha-beta T cell | 1.42e-14 | 18 |
alpha-beta T cell | 1.42e-14 | 18 |
immature T cell | 1.42e-14 | 18 |
mature T cell | 1.42e-14 | 18 |
immature alpha-beta T cell | 1.42e-14 | 18 |
leukocyte | 2.23e-14 | 136 |
hematopoietic cell | 1.39e-13 | 177 |
hematopoietic stem cell | 4.74e-12 | 168 |
nongranular leukocyte | 1.71e-11 | 115 |
hematopoietic oligopotent progenitor cell | 7.73e-10 | 161 |
hematopoietic multipotent progenitor cell | 7.73e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 8.72e-10 | 120 |
natural killer cell | 2.91e-08 | 3 |
pro-NK cell | 2.91e-08 | 3 |
lymphocyte of B lineage | 1.12e-07 | 24 |
pro-B cell | 1.12e-07 | 24 |
plasmacytoid dendritic cell | 7.44e-07 | 3 |
naive T cell | 8.97e-07 | 3 |