FFCP PHASE1:Hg19::chr4:48485341..48485394,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:48485341..48485394,+
|short_description=p1@SLC10A4
|description=CAGE_peak_1_at_SLC10A4_5end
|association_with_transcript=0bp_to_ENST00000273861,NM_152679,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=201780 | |EntrezGene=201780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22980 | |HGNC=22980 | ||
|TSSclassifier=strong | |||
|UniProt=Q96EP9 | |UniProt=Q96EP9 | ||
|association_with_transcript=0bp_to_ENST00000273861,NM_152679,uc003gyc.2_5end | |||
|cluster_id=chr4:48485341..48485394,+ | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_1_at_SLC10A4_5end | |||
|id=chr4:48485341..48485394,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.41e-12!25;CL:0000047!2.30e-09!8;CL:0000133!6.24e-08!59;CL:0000540!4.98e-07!6;CL:0000031!4.98e-07!6;CL:0000404!4.98e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.79e-11;25!CL:0000540;6.23e-10;6!CL:0000404;6.23e-10;6!CL:0002605;5.01e-09;3!CL:0000333;8.77e-09;5!CL:0000047;8.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.08e-14,8;CL:0002319,3.17e-11,25;CL:0000540,7.53e-10,6;CL:0000031,7.53e-10,6;CL:0000404,7.53e-10,6;CL:0002605,5.10e-09,3;CL:0000133,5.40e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;6.23e-10;6!UBERON:0006601;5.57e-09;82 | |||
|ontology_enrichment_disease=DOID:8692!2.22e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.62e-15;31!DOID:1036;2.79e-11;8!DOID:1240;4.46e-09;39!DOID:169;2.66e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.51e-15,31;DOID:1240,1.52e-11,39;DOID:1036,2.43e-11,8;DOID:2531,5.97e-08,51;DOID:0060083,5.97e-08,51;DOID:169,2.17e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.92e-42!94;UBERON:0001016!5.92e-42!94;UBERON:0005743!1.38e-38!86;UBERON:0001017!2.04e-38!82;UBERON:0001049!3.24e-36!57;UBERON:0005068!3.24e-36!57;UBERON:0006241!3.24e-36!57;UBERON:0007135!3.24e-36!57;UBERON:0002780!7.36e-31!41;UBERON:0001890!7.36e-31!41;UBERON:0006240!7.36e-31!41;UBERON:0003075!4.46e-30!86;UBERON:0007284!4.46e-30!86;UBERON:0003080!8.68e-30!42;UBERON:0002616!1.09e-29!59;UBERON:0002346!9.34e-29!90;UBERON:0000955!7.23e-28!69;UBERON:0006238!7.23e-28!69;UBERON:0004121!1.32e-27!169;UBERON:0000924!5.28e-27!173;UBERON:0006601!5.28e-27!173;UBERON:0002020!5.15e-26!34;UBERON:0003528!5.15e-26!34;UBERON:0001893!3.51e-25!34;UBERON:0007023!5.65e-25!115;UBERON:0003056!1.35e-24!61;UBERON:0002791!2.50e-24!33;UBERON:0001869!3.47e-24!32;UBERON:0000033!2.46e-20!123;UBERON:0000153!4.94e-19!129;UBERON:0007811!4.94e-19!129;UBERON:0000956!9.15e-18!25;UBERON:0000203!9.15e-18!25;UBERON:0001950!3.97e-15!20;UBERON:0002619!1.32e-14!22;UBERON:0002308!7.20e-10!9;UBERON:0000125!7.20e-10!9;UBERON:0003076!9.65e-08!15;UBERON:0003057!9.65e-08!15;UBERON:0009663!1.24e-07!7;UBERON:0002420!3.71e-07!9;UBERON:0007245!3.71e-07!9;UBERON:0010009!3.71e-07!9;UBERON:0010011!3.71e-07!9;UBERON:0000454!3.71e-07!9;UBERON:0001894!4.40e-07!7;UBERON:0006222!4.40e-07!7;UBERON:0000025!6.41e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.14e-27;32!UBERON:0003528;1.60e-27;34!UBERON:0002020;1.60e-27;34!UBERON:0001893;7.66e-26;34!UBERON:0002791;1.99e-25;32!UBERON:0002780;5.11e-21;41!UBERON:0001890;5.11e-21;41!UBERON:0000956;1.32e-19;25!UBERON:0000203;1.32e-19;25!UBERON:0001950;1.19e-15;20!UBERON:0000073;4.41e-14;53!UBERON:0002616;4.41e-14;53!UBERON:0002619;5.03e-14;22!UBERON:0000125;2.52e-13;9!UBERON:0002308;2.52e-13;9!UBERON:0000955;3.29e-13;68!UBERON:0001017;4.58e-12;75!UBERON:0001016;5.07e-11;83!UBERON:0000369;3.39e-10;4!UBERON:0002435;3.39e-10;4!UBERON:0000204;3.39e-10;4!UBERON:0009663;7.43e-09;7!UBERON:0000013;8.77e-09;5!UBERON:0002410;8.77e-09;5!UBERON:0005383;2.48e-08;3!UBERON:0005382;2.48e-08;3!UBERON:0002021;9.29e-08;5!UBERON:0001872;1.15e-07;5!UBERON:0002420;8.59e-07;9!UBERON:0007245;8.59e-07;9!UBERON:0010009;8.59e-07;9!UBERON:0010011;8.59e-07;9!UBERON:0000454;8.59e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.93e-36,89;UBERON:0001017,2.05e-32,81;UBERON:0003528,9.04e-31,34;UBERON:0002020,9.04e-31,34;UBERON:0001869,2.35e-29,32;UBERON:0002780,3.45e-29,41;UBERON:0001890,3.45e-29,41;UBERON:0003080,3.45e-29,41;UBERON:0006240,3.45e-29,41;UBERON:0001049,5.27e-28,56;UBERON:0005068,5.27e-28,56;UBERON:0006241,5.27e-28,56;UBERON:0007135,5.27e-28,56;UBERON:0000073,9.67e-28,53;UBERON:0002616,9.67e-28,53;UBERON:0001893,2.53e-27,34;UBERON:0002791,1.12e-26,32;UBERON:0000955,3.55e-23,68;UBERON:0006238,3.55e-23,68;UBERON:0003075,4.01e-21,82;UBERON:0007284,4.01e-21,82;UBERON:0004121,4.79e-21,171;UBERON:0000924,4.79e-21,171;UBERON:0006601,4.79e-21,171;UBERON:0003056,5.32e-21,61;UBERON:0002346,9.50e-20,86;UBERON:0000956,2.36e-19,25;UBERON:0000203,2.36e-19,25;UBERON:0011216,1.34e-18,223;UBERON:0010371,3.50e-16,104;UBERON:0001950,2.09e-15,20;UBERON:0002619,8.35e-14,22;UBERON:0000125,1.73e-13,9;UBERON:0002308,1.73e-13,9;UBERON:0000369,2.09e-10,4;UBERON:0002435,2.09e-10,4;UBERON:0000204,2.09e-10,4;UBERON:0010082,2.09e-10,4;UBERON:0010314,4.71e-10,132;UBERON:0009663,5.12e-09,7;UBERON:0007023,6.18e-09,114;UBERON:0000013,6.85e-09,5;UBERON:0002410,6.85e-09,5;UBERON:0005383,2.03e-08,3;UBERON:0005382,2.03e-08,3;UBERON:0002021,8.98e-08,5;UBERON:0001872,1.16e-07,5;UBERON:0002420,6.49e-07,9;UBERON:0007245,6.49e-07,9;UBERON:0010009,6.49e-07,9;UBERON:0010011,6.49e-07,9;UBERON:0000454,6.49e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.861847406537515,0.408001382488506,0.626909442956176,5.72471974262113,5.06435372769671,7.28147309649856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74091352595139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0.505008341862199,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0.132529768321485,0.464775771478074,0.621966330092223,0.756962552626885,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0.171567810298526,0,0,0.100528972411631,0,0.325808305310325,0,0,0.927443239800615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,63.2695614313934,9.10978977003352,0.773288812777695,3.18280904135263,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0.877039506583738,1.5686127061494,0,0.656029291399411,0,0,0.732555718546747,0.577566499444116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,3.24621940274555,0,0,0,0,0,0,0.201799707191048,1.27753871307098,0,8.90998216494528,6.48660712888006,7.8419096604597,0,2.22724939116194,41.8497156422222,16.227340708559,0.33307196799782,5.63948020351398,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0.422250816255987,0.19924798825107,1.38141957765574,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.74214478529481,1.99613798001194,0,0,0,0,0,0,1.03423011972439,0.291604613383254,3.29887490373255,4.42870692906919,2.53252521113357,0,0,0,0.658156191461918,0,0,0.384751292518985,0,0.69169171316418,0,0.108647371922008,0,0,0,0,0,0,3.15833924864053,2.15668787749514,2.68514539161348,4.55408958538044,21.4564381623511,0,0,0.989471500037586,0,0.995261931078505,0.265372693510018,2.4441205797345,0,0,0,0.337005664903385,0,2.34264445725339,0,0,0,0,0,2.44858209304392,0.126373159256976,0.60129367765797,0.933193722575224,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,1.07628353124994,0,0,0,0.599428828746391,0,0,0.343189995723929,0,0.124252535565433,0,0,0,0,0.577901179803038,4.80336230967832,0.410716136675979,0,0,0,0.558564802544508,1.14580212005842,0,0.199679000498991,0,0.446342914883745,0,0,0,0,0,0,2.75596948241297,0,0,0.272406812223151,1.12527203925513,2.06309154895851,2.49264202817511,0,0,0.91124334987037,0,0,0.157363764404994,0,0.35857467866569,0,0.714695326373367,0,0,0,0,0,2.39460383124975,2.87323822622686,0,0.113312091520126,0,0,8.14482625077768,5.15707146796491,0.684347351537318,0,0.427149650270779,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,1.22026264901963,1.001527445652,0.573409195690071,0.443716206147409,2.11127770000704,5.25724812757677,0,0,0.570930667089935,0,0.468334905806882,4.34763085832475,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690860683462397,0,0.829550616910385,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,3.7089367678059,48.6289899399035,1.88719130227076,139.133079056626,0,0,0.123935764259002,0,0,0,2.40171224485641,0,0,1.92687675289379,1.41696576325585,0.478901577171454,2.66651273512982,2.26864526599546,1.45230230174858,0.645902582527404,0,0,0.11796972334774,0,0,0,8.28431911272121,0,0.0752103283492573,0.40341013740704,0,0,0,0,1.2156765231311,3.90539049306924,0.826747186004736,1.14148458349032,1.09394961803644,1.64477330057155,0,0,0.127762427639595,0.535701835878287,0.672567444437648,3.64179362541979,2.73194629621557,0,0,0,0.815636795721981,1.97318320688547,0.118193840883968,0,0,2.67096502857203,0,3.65263488203798,0,0,2.14429632529969,0,0,0.521574816907738,0,0,0,0,1.72090943528111,0.828324005113957,0.511280428554946,0.846774100381858,0.22910686854405,0.31020638566432,0.955538938977433,0.111855431797792,0,0,0,0,0,0,0.233939463462106,0,1.78380136166353,0,2.6385724018903,1.05673990496671,0.231522474323834,0.655678681511872,0,0,0,0.588925401344836,0.297046400327086,2.113278637917,0,0,0,0,0.178553938605658,0,0,0.730336388246517,1.83491713361816,0.286679166302903,0.315543124386369,1.08786384305464,1.30905207102113,2.645134202577,0,0,0,0.504665699340316,1.85751472338282,0.886889507080059,1.22386595690378,1.60330443159336,1.92979289023174,0.50141507858475,0.378893491091197,0,0.829169439458779,0.310298987585686,0,0,0,0.0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| ||
|short_description=p1@SLC10A4 | |||
}} | }} |
Latest revision as of 22:45, 17 September 2015
Short description: | p1@SLC10A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC10A4_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | 0bp_to_ENST00000273861, NM_152679, uc003gyc.2_5end |
EntrezGene: | SLC10A4 |
HGNC: | 22980 |
UniProt: | Q96EP9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.08e-14 | 8 |
neural cell | 3.17e-11 | 25 |
neuron | 7.53e-10 | 6 |
neuroblast | 7.53e-10 | 6 |
electrically signaling cell | 7.53e-10 | 6 |
astrocyte of the cerebral cortex | 5.10e-09 | 3 |
neurectodermal cell | 5.40e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.51e-15 | 31 |
leukemia | 1.52e-11 | 39 |
chronic leukemia | 2.43e-11 | 8 |
hematologic cancer | 5.97e-08 | 51 |
immune system cancer | 5.97e-08 | 51 |
neuroendocrine tumor | 2.17e-07 | 6 |