FFCP PHASE1:Hg19::chr6:159240387..159240414,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:159240387..159240414,-
|short_description=p1@EZR
|description=CAGE_peak_1_at_EZR_5end
|association_with_transcript=-6bp_to_ENST00000476189_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7430 | |EntrezGene=7430 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12691 | |HGNC=12691 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000476189_5end | |||
|cluster_id=chr6:159240387..159240414,- | |||
|coexpression_cluster_id=C2851 | |||
|description=CAGE_peak_1_at_EZR_5end | |||
|id=chr6:159240387..159240414,- | |||
|ontology_enrichment_celltype=CL:0000066!2.11e-21!254;CL:0000063!2.27e-15!578;CL:0000838!8.35e-14!52;CL:0000542!1.75e-13!53;CL:0000051!1.75e-13!53;CL:0000738!8.36e-11!140;CL:0000945!1.84e-10!24;CL:0000826!1.84e-10!24;CL:0002087!3.04e-10!119;CL:0002031!5.70e-10!124;CL:0000236!5.94e-08!14;CL:0000076!2.03e-07!62;CL:0002076!2.31e-07!43;CL:0000012!5.56e-07!682;CL:0000548!6.86e-07!679;CL:0000004!6.86e-07!679;CL:0000255!6.86e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.85e-10;24!CL:0000542;8.31e-09;53!CL:0000236;6.78e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.03e-21,253;CL:0000838,8.35e-14,52;CL:0000542,1.75e-13,53;CL:0000051,1.75e-13,53;CL:0000738,5.15e-11,136;CL:0002087,1.74e-10,115;CL:0000945,1.84e-10,24;CL:0000826,1.84e-10,24;CL:0002031,3.41e-10,120;CL:0002076,4.05e-08,42;CL:0000236,5.94e-08,14;CL:0000223,7.34e-07,58;CL:0000076,7.62e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000051;8.31e-09;53 | |||
|ontology_enrichment_disease=DOID:305!9.73e-15!106;DOID:162!6.48e-11!235;DOID:0050687!1.42e-10!143;DOID:14566!1.04e-09!239;DOID:299!6.90e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;7.00e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.73e-15,106;DOID:162,6.48e-11,235;DOID:0050687,1.42e-10,143;DOID:14566,1.04e-09,239;DOID:299,6.90e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.12e-07!14;UBERON:0000158!1.12e-07!14;UBERON:0004119!5.31e-07!169;UBERON:0000925!5.31e-07!169;UBERON:0006595!5.31e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.12e-07,14;UBERON:0000158,1.12e-07,14;UBERON:0004119,4.44e-07,160;UBERON:0000925,4.44e-07,160;UBERON:0006595,4.44e-07,160;UBERON:0006554,4.65e-07,47;UBERON:0001008,8.00e-07,48 | |||
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| ||
|short_description=p1@EZR | |||
}} | }} |
Latest revision as of 12:57, 16 September 2015
Short description: | p1@EZR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EZR_5end |
Coexpression cluster: | C2851_amniotic_choriocarcinoma_Mesothelial_CD19_extraskeletal_Amniotic_chorionic |
Association with transcript: | -6bp_to_ENST00000476189_5end |
EntrezGene: | EZR |
HGNC: | 12691 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.03e-21 | 253 |
lymphoid lineage restricted progenitor cell | 8.35e-14 | 52 |
lymphocyte | 1.75e-13 | 53 |
common lymphoid progenitor | 1.75e-13 | 53 |
leukocyte | 5.15e-11 | 136 |
nongranular leukocyte | 1.74e-10 | 115 |
lymphocyte of B lineage | 1.84e-10 | 24 |
pro-B cell | 1.84e-10 | 24 |
hematopoietic lineage restricted progenitor cell | 3.41e-10 | 120 |
endo-epithelial cell | 4.05e-08 | 42 |
B cell | 5.94e-08 | 14 |
endodermal cell | 7.34e-07 | 58 |
squamous epithelial cell | 7.62e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.12e-07 | 14 |
membranous layer | 1.12e-07 | 14 |
endoderm-derived structure | 4.44e-07 | 160 |
endoderm | 4.44e-07 | 160 |
presumptive endoderm | 4.44e-07 | 160 |
urinary system structure | 4.65e-07 | 47 |
renal system | 8.00e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.73e-15 | 106 |
cancer | 6.48e-11 | 235 |
cell type cancer | 1.42e-10 | 143 |
disease of cellular proliferation | 1.04e-09 | 239 |
adenocarcinoma | 6.90e-07 | 25 |