FFCP PHASE1:Hg19::chr10:118719743..118719755,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=57698 | |EntrezGene=57698 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=29319 | |HGNC=29319 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=86bp_to_ENST00000490615_5end | |association_with_transcript=86bp_to_ENST00000490615_5end | ||
|cluster_id=chr10:118719743..118719755,- | |||
|coexpression_cluster_id=C2983 | |coexpression_cluster_id=C2983 | ||
|description=CAGE_peak_13_at_KIAA1598_5end | |description=CAGE_peak_13_at_KIAA1598_5end |
Latest revision as of 14:53, 16 September 2015
Short description: | p13@KIAA1598 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_KIAA1598_5end |
Coexpression cluster: | C2983_Melanocyte_astrocytoma_melanoma_Macrophage_Monocytederived_Dendritic_substantia |
Association with transcript: | 86bp_to_ENST00000490615_5end |
EntrezGene: | KIAA1598 |
HGNC: | 29319 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p13@KIAA1598 |
---|
0
10
20
30
40
50
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.67e-22 | 10 |
melanoblast | 1.67e-22 | 10 |
macrophage | 6.82e-17 | 6 |
pigment cell | 6.40e-16 | 14 |
neurecto-epithelial cell | 5.70e-11 | 20 |
immature conventional dendritic cell | 1.33e-09 | 5 |
common dendritic progenitor | 1.33e-09 | 5 |
light melanocyte | 2.33e-09 | 3 |
columnar/cuboidal epithelial cell | 5.70e-08 | 27 |
dark melanocyte | 1.03e-07 | 1 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 7.96e-13 | 2 |
lobe parts of cerebral cortex | 7.96e-13 | 2 |
hippocampal formation | 7.96e-13 | 2 |
limbic lobe | 7.96e-13 | 2 |
multi cell component structure | 1.14e-12 | 2 |
neuron projection bundle | 1.14e-12 | 2 |
substantia nigra | 2.07e-07 | 1 |
midbrain nucleus | 2.07e-07 | 1 |
regional part of midbrain | 2.07e-07 | 1 |
midbrain | 2.07e-07 | 1 |
Showing 1 to 10 of 30 entries