FFCP PHASE1:Hg19::chr12:51663502..51663523,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=57228 | |EntrezGene=57228 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC=26918 | |HGNC=26918 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q0VAQ4 | |UniProt=Q0VAQ4 | ||
|association_with_transcript=209bp_to_uc001ryc.1_5end | |association_with_transcript=209bp_to_uc001ryc.1_5end | ||
|cluster_id=chr12:51663502..51663523,- | |||
|description=CAGE_peak_7_at_SMAGP_5end | |description=CAGE_peak_7_at_SMAGP_5end | ||
|id=chr12:51663502..51663523,- | |id=chr12:51663502..51663523,- |
Latest revision as of 19:55, 18 September 2015
Short description: | p7@SMAGP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SMAGP_5end |
Coexpression cluster: | NA |
Association with transcript: | 209bp_to_uc001ryc.1_5end |
EntrezGene: | SMAGP |
HGNC: | 26918 |
UniProt: | Q0VAQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p7@SMAGP |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.83e-23 | 7 |
germ cell | 4.83e-23 | 7 |
hair follicle dermal papilla cell | 1.29e-19 | 3 |
stem cell of epidermis | 1.29e-19 | 3 |
hair follicle cell | 5.42e-12 | 5 |
fibroblast of the conjuctiva | 1.07e-07 | 1 |
epithelial cell of pancreas | 1.64e-07 | 4 |
smooth muscle cell of the pulmonary artery | 1.80e-07 | 1 |
epithelial cell of nephron | 6.06e-07 | 15 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.29e-19 | 3 |
papillary layer of dermis | 1.29e-19 | 3 |
hair follicle | 5.42e-12 | 5 |
hair follicle placode | 5.42e-12 | 5 |
hepatopancreatic ampulla | 1.30e-07 | 1 |
extrahepatic bile duct | 1.30e-07 | 1 |
common bile duct | 1.30e-07 | 1 |
duodenal papilla | 1.30e-07 | 1 |
rectum | 4.47e-07 | 4 |
skin epidermis | 5.78e-07 | 15 |
Showing 1 to 10 of 21 entries
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 9.83e-14 | 2 |
islet cell tumor | 4.57e-08 | 1 |
endocrine pancreas cancer | 4.57e-08 | 1 |
pancreatic endocrine carcinoma | 4.57e-08 | 1 |
pancreatic cancer | 1.64e-07 | 4 |
gastrointestinal system cancer | 2.21e-07 | 14 |
germ cell and embryonal cancer | 3.54e-07 | 22 |
germ cell cancer | 3.54e-07 | 22 |
Showing 1 to 8 of 8 entries