FFCP PHASE1:Hg19::chr10:116286599..116286654,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3983 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=78 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-5bp_to_ENST00000369257_5end | |||
|cluster_id=chr10:116286599..116286654,- | |||
|description=CAGE_peak_2_at_ABLIM1_5end | |||
|id=chr10:116286599..116286654,- | |||
|ontology_enrichment_celltype=CL:0000542!1.36e-12!53;CL:0000051!1.36e-12!53;CL:0000838!2.06e-12!52;CL:0000791!3.41e-10!18;CL:0000789!3.41e-10!18;CL:0002420!3.41e-10!18;CL:0002419!3.41e-10!18;CL:0000790!3.41e-10!18;CL:0000223!2.65e-09!59;CL:0000066!5.65e-09!254;CL:0002076!7.48e-09!43;CL:0000625!3.58e-07!11;CL:0000084!3.91e-07!25;CL:0000827!3.91e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.69e-10;18!CL:0000789;1.69e-10;18!CL:0002419;1.69e-10;18!CL:0000542;1.40e-07;53!CL:0002251;1.45e-07;20!CL:0002076;1.76e-07;42!CL:0000625;2.32e-07;11!CL:0000084;2.52e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,7.40e-13,53;CL:0000051,7.40e-13,53;CL:0000838,1.13e-12,52;CL:0000223,1.72e-10,58;CL:0000791,1.74e-10,18;CL:0000789,1.74e-10,18;CL:0002420,1.74e-10,18;CL:0002419,1.74e-10,18;CL:0000790,1.74e-10,18;CL:0000066,3.58e-10,253;CL:0002076,1.03e-09,42;CL:0002251,1.54e-07,20;CL:0000625,2.31e-07,11;CL:0000084,2.40e-07,25;CL:0000827,2.40e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.69e-10;18!CL:0000051;1.40e-07;53!UBERON:0006595;1.45e-07;86!UBERON:0008947;3.33e-07;29 | |||
|ontology_enrichment_disease=DOID:305!1.50e-18!106;DOID:0050687!5.15e-13!143;DOID:1749!2.99e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.91e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.74e-19,106;DOID:0050687,4.93e-14,143;DOID:1749,1.92e-07,14 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.79e-17,114;UBERON:0004921,2.55e-13,118;UBERON:0001007,8.81e-12,145;UBERON:0001555,8.81e-12,145;UBERON:0007026,8.81e-12,145;UBERON:0001041,8.94e-12,87;UBERON:0004119,3.33e-11,160;UBERON:0000925,3.33e-11,160;UBERON:0006595,3.33e-11,160;UBERON:0001004,2.19e-10,74;UBERON:0011216,2.04e-09,223;UBERON:0000065,4.22e-09,54;UBERON:0001557,2.49e-07,19;UBERON:0000072,3.06e-07,47;UBERON:0001048,6.47e-07,160;UBERON:0008947,8.51e-07,38;UBERON:0003258,8.51e-07,38 | |||
|phase1_expression=0,0.214100523890983,0.563817616383885,0,0.893922188854576,0.872338524100369,0,1.26343974685366,1.56711376919903,5.89761447603621,8.37361401566913,0.218441372130172,0.263766978228454,0,0,0,0,0,0,3.57051068422685,0.204000691244253,3.13454721478088,0.286235987131057,0.136874425072884,0,20.0203123059632,18.3905320367878,19.7564061097335,10.6208354749204,15.7370053219857,7.1215416725395,12.871897142705,13.253060426243,21.4457325896737,8.52139206383318,5.68676929949686,8.22081230137572,6.09394949385065,9.02450013615638,8.68043482863407,1.11957737119962,4.21061765824673,1.80302897343931,0.872389432677388,1.51150377475524,0.242584061187816,0.697287110717054,4.93401465626191,0.619412741790207,1.1507695692886,0.768482119587302,1.6553756092201,0.344745680736619,2.5819387343353,1.35426486594342,1.12945403725563,3.82068610080984,0.898893937780338,0.306083892370903,3.53021929783703,0.639337125799041,0,1.79517291859469,0.426224750532694,0.580418477257168,3.40431134814684,0.622822248995575,1.00499466102697,3.12889751052121,1.08594422352558,4.84319602106695,2.94622108790052,0.949387162322653,0.211255286311942,0,0,0,0,0,0,0,0,29.9193615584249,24.5762375067959,23.1272406004524,18.3493995703598,25.2249471832688,30.4618793175876,21.1534359291156,25.7594513724548,38.7064818994425,27.6001479004341,30.9641314781435,7.93027971474155,11.2101712596307,3.68737718685108,53.8984770111903,33.0129040709298,39.4754878079058,57.8465274051746,53.7771739945424,52.5527064365554,68.189354942769,13.9263071106467,15.6141130961664,12.84896588585,17.331447280961,11.1439448161337,12.2255786706286,13.9772218913125,21.5553013872962,37.0947949740867,86.7476394498053,85.6130649887082,90.9459057103298,25.0413647361621,33.3401829433671,33.6754896572977,51.6160171719786,41.7320692764567,41.6693410468108,31.3649174667963,45.0219606042541,56.9540419637162,38.7285252312272,42.383128115879,29.5606078891577,37.9020677262497,27.8137803614848,41.5646039143633,0,8.71911117614727,8.438929081673,2.89151321907653,0.50133791063589,3.62116297402059,0,0.973269740605272,2.07976597760949,4.43458794925128,14.4927396393658,15.1935727577347,13.8432209551166,22.9886354526346,0.649094787309367,0.348259474598534,0.930705723632056,0.476981248610684,3.43196946468077,1.11437250398869,6.75792185046797,1.72046919021225,7.28995053375948,8.47961912886015,3.77549492588915,5.50236083880135,3.9709043641994,3.87625138753993,2.13459757612026,8.03329470635209,0,1.52054421143703,0,8.08858776760911,7.29127753093584,15.1809538082936,9.87929239555147,7.88280363383256,3.06633274931766,2.84779697870439,2.93122790288652,1.31780417436063,0,21.3686085549842,0,2.40597972162702,0.529636723252875,0.286836620748814,1.41867352879343,4.48542080113846,5.33744978648525,1.48000529050296,4.04574346019696,7.27437629176316,2.28846664358842,13.0167387774641,2.30470369792,7.96692868234909,0,0.570471821544449,0,1.05691048779388,0.485618833104395,0.702254033511242,0,0,0,0,0,0,0,0.336672227908132,2.00189631795143,0,0,0,1.80285670687916,8.50741373700158,0,0,0.211931901159562,0.300091096084402,0.206105058476878,0.515281080091258,0.18611685633159,0,0.0974370051611986,0,0.184099797284599,9.69876340912871,0,0.10075209822764,1.86516651541536,10.0495643644914,12.5463215471784,14.0534251740612,15.8565817968474,18.4216377966865,17.8938672019058,16.6894298574746,11.8590799911545,16.0590037993365,0,0,2.76269842704961,0,0,28.8668592097219,27.9850585529649,29.1623346159013,28.2352570194929,23.7488594060723,32.9806160564424,24.6741293933101,28.8445553734259,25.3933123584618,22.8828190933641,0,0.8231480226628,1.47008711385542,0,6.87979051674338,4.13552934676983,2.6487785964879,20.1701039210706,3.08822058537346,23.8158119336717,10.1161577931858,17.7936281168587,28.8875948894612,4.23550796903422,0,1.44331342025273,1.15930404975077,3.75707821554629,1.15493158208859,2.31492756288305,3.61482889245737,0.790204397959275,1.71697232418975,0.492434012174795,0,0,6.56136837907439,1.34385702559088,8.50650583454319,28.0318176059915,29.3540277899102,9.96794965829549,0,0,0.621984346622316,0.432359860250884,0.88369703398466,0.126995788584338,0,0,1.71072446022705,0,0,0.285826432630578,0.672786506072164,8.7192013766656,0.4400297149257,0.258543431515556,7.15312891703765,0,0.531876233169741,0,0.771622122786426,0,0.532844358032199,0.57191197463259,0,0,0,0,0,0,0,0.899756920638513,0,0,0,0,0,1.42636905040718,0.144781306667579,0.410952645100767,0.895304816199478,24.3224762465954,36.6477213975585,27.8159571568777,28.1071249452649,1.01637849688985,0,1.54657762555539,1.84267891867784,0.637938751653163,2.99602809578873,0,2.90090859405225,0.24538298343828,0,0,0.207970861530807,0.713715955188647,1.89242898040722,1.63997980989798,1.20378439891088,2.27407504055985,0,5.97803038681893,0.737476674166813,0.347534457872331,0.587403472388222,0.343143423810856,40.5265331200859,29.9842739137877,27.1087996820749,0,0,2.11673205330776,0.744323423456331,0.153461973288062,0,1.02511319404561,0,0.160853921143607,0,0,0.177561725313127,3.85997633264903,0,0.23242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|short_description=p2@ABLIM1 | |||
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Latest revision as of 12:43, 16 September 2015
Short description: | p2@ABLIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ABLIM1_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000369257_5end |
EntrezGene: | ABLIM1 |
HGNC: | 78 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 7.40e-13 | 53 |
common lymphoid progenitor | 7.40e-13 | 53 |
lymphoid lineage restricted progenitor cell | 1.13e-12 | 52 |
endodermal cell | 1.72e-10 | 58 |
mature alpha-beta T cell | 1.74e-10 | 18 |
alpha-beta T cell | 1.74e-10 | 18 |
immature T cell | 1.74e-10 | 18 |
mature T cell | 1.74e-10 | 18 |
immature alpha-beta T cell | 1.74e-10 | 18 |
epithelial cell | 3.58e-10 | 253 |
endo-epithelial cell | 1.03e-09 | 42 |
epithelial cell of alimentary canal | 1.54e-07 | 20 |
CD8-positive, alpha-beta T cell | 2.31e-07 | 11 |
T cell | 2.40e-07 | 25 |
pro-T cell | 2.40e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.79e-17 | 114 |
subdivision of digestive tract | 2.55e-13 | 118 |
digestive system | 8.81e-12 | 145 |
digestive tract | 8.81e-12 | 145 |
primitive gut | 8.81e-12 | 145 |
foregut | 8.94e-12 | 87 |
endoderm-derived structure | 3.33e-11 | 160 |
endoderm | 3.33e-11 | 160 |
presumptive endoderm | 3.33e-11 | 160 |
respiratory system | 2.19e-10 | 74 |
organ system subdivision | 2.04e-09 | 223 |
respiratory tract | 4.22e-09 | 54 |
upper respiratory tract | 2.49e-07 | 19 |
segment of respiratory tract | 3.06e-07 | 47 |
primordium | 6.47e-07 | 160 |
respiratory primordium | 8.51e-07 | 38 |
endoderm of foregut | 8.51e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.74e-19 | 106 |
cell type cancer | 4.93e-14 | 143 |
squamous cell carcinoma | 1.92e-07 | 14 |