FFCP PHASE1:Hg19::chr10:80827167..80827213,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283050 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NR_015429,NR_024429,NR_024431,uc001jzx.2,uc001jzy.2,uc001jzz.2_5end | |||
|cluster_id=chr10:80827167..80827213,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_LOC283050_5end | |||
|id=chr10:80827167..80827213,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.20e-09;82!UBERON:0006215;7.48e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.16e-22!57;UBERON:0005068!2.16e-22!57;UBERON:0006241!2.16e-22!57;UBERON:0007135!2.16e-22!57;UBERON:0007023!1.52e-21!115;UBERON:0001017!2.15e-19!82;UBERON:0000955!4.79e-19!69;UBERON:0006238!4.79e-19!69;UBERON:0005743!5.13e-19!86;UBERON:0002780!6.54e-19!41;UBERON:0001890!6.54e-19!41;UBERON:0006240!6.54e-19!41;UBERON:0000073!2.39e-18!94;UBERON:0001016!2.39e-18!94;UBERON:0002616!4.03e-18!59;UBERON:0003080!5.59e-18!42;UBERON:0001893!8.42e-18!34;UBERON:0002619!1.61e-17!22;UBERON:0002020!1.63e-17!34;UBERON:0003528!1.63e-17!34;UBERON:0002791!4.26e-17!33;UBERON:0001869!5.16e-17!32;UBERON:0001950!2.95e-16!20;UBERON:0003075!1.51e-15!86;UBERON:0007284!1.51e-15!86;UBERON:0002346!1.44e-14!90;UBERON:0000956!7.22e-14!25;UBERON:0000203!7.22e-14!25;UBERON:0000153!2.23e-12!129;UBERON:0007811!2.23e-12!129;UBERON:0000033!1.30e-11!123;UBERON:0003056!1.50e-11!61;UBERON:0004121!7.43e-10!169;UBERON:0000924!1.88e-09!173;UBERON:0006601!1.88e-09!173;UBERON:0001871!3.94e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.43e-55;22!UBERON:0001869;2.44e-54;32!UBERON:0001950;2.65e-51;20!UBERON:0002791;6.99e-51;32!UBERON:0001893;2.11e-49;34!UBERON:0003528;1.45e-48;34!UBERON:0002020;1.45e-48;34!UBERON:0000956;3.86e-48;25!UBERON:0000203;3.86e-48;25!UBERON:0002780;1.95e-43;41!UBERON:0001890;1.95e-43;41!UBERON:0000073;1.52e-34;53!UBERON:0002616;1.52e-34;53!UBERON:0000955;3.32e-26;68!UBERON:0001017;1.05e-21;75!UBERON:0001016;7.86e-18;83!UBERON:0001871;1.17e-17;6!UBERON:0000200;3.17e-16;6!UBERON:0002420;8.72e-14;9!UBERON:0007245;8.72e-14;9!UBERON:0010009;8.72e-14;9!UBERON:0010011;8.72e-14;9!UBERON:0000454;8.72e-14;9!UBERON:0002021;2.03e-13;5!UBERON:0001872;2.59e-13;5!UBERON:0000349;1.37e-12;5!UBERON:0000369;8.71e-12;4!UBERON:0002435;8.71e-12;4!UBERON:0000204;8.71e-12;4!UBERON:0000125;3.50e-10;9!UBERON:0002308;3.50e-10;9!UBERON:0009663;1.13e-09;7!UBERON:0005383;3.53e-09;3!UBERON:0005382;3.53e-09;3!UBERON:0001870;3.83e-09;3!UBERON:0007023;8.67e-09;114!UBERON:0011216;1.99e-08;132!UBERON:0004733;3.87e-07;12!UBERON:0002028;3.87e-07;12!UBERON:0002680;4.42e-07;9!UBERON:0001895;4.42e-07;9!UBERON:0001905;7.12e-07;2!UBERON:0002757;7.12e-07;2!UBERON:0010134;7.12e-07;2!UBERON:0005408;7.12e-07;2!UBERON:0001899;7.12e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.74e-65,53;UBERON:0002616,5.74e-65,53;UBERON:0001049,3.74e-64,56;UBERON:0005068,3.74e-64,56;UBERON:0006241,3.74e-64,56;UBERON:0007135,3.74e-64,56;UBERON:0001869,5.92e-61,32;UBERON:0002780,6.99e-61,41;UBERON:0001890,6.99e-61,41;UBERON:0003080,6.99e-61,41;UBERON:0006240,6.99e-61,41;UBERON:0001893,5.90e-57,34;UBERON:0003528,9.40e-57,34;UBERON:0002020,9.40e-57,34;UBERON:0002791,1.85e-56,32;UBERON:0000955,4.04e-56,68;UBERON:0006238,4.04e-56,68;UBERON:0002619,1.05e-55,22;UBERON:0001950,2.16e-51,20;UBERON:0001017,4.05e-50,81;UBERON:0000956,1.85e-48,25;UBERON:0000203,1.85e-48,25;UBERON:0003075,8.81e-45,82;UBERON:0007284,8.81e-45,82;UBERON:0001016,5.74e-44,89;UBERON:0002346,3.68e-42,86;UBERON:0003056,1.82e-40,61;UBERON:0010371,7.45e-33,104;UBERON:0007023,2.07e-26,114;UBERON:0010314,6.44e-25,132;UBERON:0004121,1.00e-21,171;UBERON:0000924,1.00e-21,171;UBERON:0006601,1.00e-21,171;UBERON:0011216,2.04e-19,223;UBERON:0001871,6.93e-18,6;UBERON:0000200,2.25e-16,6;UBERON:0000025,2.34e-15,192;UBERON:0002420,6.07e-14,9;UBERON:0007245,6.07e-14,9;UBERON:0010009,6.07e-14,9;UBERON:0010011,6.07e-14,9;UBERON:0000454,6.07e-14,9;UBERON:0002021,2.01e-13,5;UBERON:0001872,3.80e-13,5;UBERON:0000349,4.53e-13,5;UBERON:0000369,7.43e-12,4;UBERON:0002435,7.43e-12,4;UBERON:0000204,7.43e-12,4;UBERON:0010082,7.43e-12,4;UBERON:0004111,2.24e-11,240;UBERON:0000125,2.62e-10,9;UBERON:0002308,2.62e-10,9;UBERON:0009663,1.16e-09,7;UBERON:0005383,3.00e-09,3;UBERON:0005382,3.00e-09,3;UBERON:0001870,3.52e-09,3;UBERON:0000483,1.38e-07,306;UBERON:0000119,2.09e-07,309;UBERON:0003076,2.35e-07,15;UBERON:0003057,2.35e-07,15;UBERON:0004733,3.54e-07,12;UBERON:0002028,3.54e-07,12;UBERON:0007277,3.54e-07,12;UBERON:0002680,3.78e-07,9;UBERON:0001895,3.78e-07,9;UBERON:0010092,3.78e-07,9;UBERON:0001905,7.17e-07,2;UBERON:0002757,7.17e-07,2;UBERON:0010134,7.17e-07,2;UBERON:0005408,7.17e-07,2;UBERON:0001899,7.17e-07,2 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0.446961094427288,0,2.53299878168311,0,0.522371256399677,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0.434021741431704,0.447830948479849,0.32389366601898,0,0.872389432677388,0,0,0,0.411167888021826,0,0,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0.564727018627814,0,0,0.306083892370903,0,0,0.659702600373432,0,0,0.580418477257168,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0.422510572623884,0.425208599930087,0.209658645508376,0.22465726229299,0,0.16072558669708,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.786839080455332,0.393010762749165,0.205601498999509,0,1.62961133316795,0,0,0.779873198196215,0.883817722424512,1.32920336750173,0.541607727530031,0,0.780356085359269,0.822189523018381,0.829050053357545,0.869409257205157,0.14828656316206,0.535081656179426,2.09071047609954,0.906474741580529,0.766440987203842,1.03088233644789,0.253019692019503,0,0,0,0.451725357233318,0.255973222308837,0,0.710331756132051,0,0.403213486449465,0,0.434473211648397,0,0,0,0,0.50133791063589,1.01392563272577,0,0,0.0945348171640679,0.221729397462564,0,1.11332214173056,0.364295288292542,0,0,0,0.26591592103773,0,0,0,0.79504962946682,0,0.347140501607594,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0.367663080345869,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.529636723252875,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0.206651562351531,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0.427114777637135,0.423863802319124,0.300091096084402,0.618315175430633,0.772921620136887,0.37223371266318,1.35021065793013,0.389748020644795,0.757301322732344,0.368199594569197,0.484938170456436,1.42003837006646,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,1.96565443335525,0,0,0,0.171567810298526,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0.925971025153221,0.190254152234598,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0.880484340132261,1.4512968087854,0.720599767084807,0.12624243342638,0.380987365753014,0.381988425558278,0,1.71072446022705,0.205654985406647,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42156779497018,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0.385029108839245,0,0,0.773288812777695,0.670065061337395,1.27587750330633,0.749007023947182,0,0,0,0.500170521059677,0.542530047399471,0.415941723061614,0.535286966391485,0,0.117141414992713,0,0,0,0,0,0.260650843404249,0.195801157462741,0,1.03384013061444,0.215714200818617,0.320182673410333,0,0,0,0.248107807818777,1.07423381301644,0.280660094433074,0.384417447767103,1.02341449813341,0,1.48418066444991,0,0.355123450626254,0.0821271560138091,0.519254429183621,0.116210378459959,0.120859449591622,0,0.0920809889358963,0,0,0.262248829918848,0,0.231046011313244,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0.512900250232778,0,0,0.309123034943167,0.0915694648183434,0.495056999523528,0,0,0,0,0.154048617114644,0,0.137836572484531,0.322260734604821,0.290033387828457,0.0852266274161009,0.178064071293475,0,0,1.78657797492418,0.2023155617111,0,0.94443704049192,1.3940745403212,0,0,0,0,0,0,0,0.571890581771475,0,0,0.318203247925937,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0.272999822815972,0.141405431953713,1.13008116620243,0.551365343546124,0,0,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0.987884678879706,0,0,0,1.34060455107157,0,0.564862804660675,0,1.68471475667626,0.886860307073351,0.459446800413919,0.507447609232169,0,0,0.476463550915578,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0,0.142283686696828,0,0,0.766021480529467,1.05836791361941,0,0.842391534340376,0,0.313359791546046,0,0.169291777801603,0,0.201799707191048,0.425846237690326,0,0.307240764308458,0,0,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0.36408156524854,0.780103689942349,0,0.47748896947538,0.593929361665277,0.921482106297696,1.9882952955326,3.09472716103128,0.445234820091624,0,0.211125408127993,0.597743964753209,0.276283915531148,0.755798243562828,0,0.123084805461069,0,0.0898683511473268,0,0.511572370226872,0.789147245095469,0,0,2.90799823828566,3.24688343566479,1.99613798001194,0.260427761085233,0.437299999980979,0,0.455173793141999,0.254253650292766,0,0,0.291604613383254,0.173624994933292,3.54296554325536,4.94445398364173,3.05163472634166,2.76448149828062,4.13766666534966,0.658156191461918,0.10893846351899,0.557694977114413,0.692552326534174,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0.470940769185074,0,0,0.19606253431774,0.335643173951685,0,0,0,0,0.141353071433941,0.216388639742091,0.995261931078505,0.796118080530053,0,0,0,0.208843899010911,0.876214728748802,0,2.10838001152805,0,0,0.242780379534093,0.789168805698781,1.20990716048664,4.59109142445735,0.947798694427319,0,0,0,1.98595173525299,0,0,0,0.277349346026277,0,0.0979923974143777,0,1.7472666824203,0.171986032471617,0,0,0,0.484945082442097,0.176512253383001,0.90392296312213,0,0.19871461170299,5.88790402389672,0.782205530939212,0.561111741760736,0.640358984218058,0.39961921916426,0.144090417154106,0.343609788497747,0.171594997861965,0.14405479798815,0.248505071130865,0.471388069233591,0,0.941425616810999,0.101998217636322,0.288950589901519,0,1.23214841002794,0,0.429765441419957,0,0,0,0,0.199679000498991,0.429226048136571,0,0.134366944973453,0.720599767084807,0,0,0,0,0.0984274815147488,0,1.59045937961861,1.77064427945048,0,0,0,0.2249738915515,0,6.01420610914444,0.670869375198532,0.236417121897595,0.367182116944987,0,0.537862017998534,0,0,0,0,0,0,0.326587360109409,0,0.246277562248017,1.19271615249795,0,0.58620893471233,0,1.93924434542326,0.52893040697076,0.171086837884329,0.704815022316672,0.320362237703084,0.628817220398664,0.414239055347196,0,0.197611631897944,0,0,0.544017803369474,0,0,0,2.35581144375351,3.54427271986794,2.80660409274515,4.38168257472749,0.573409195690071,0.887432412294818,1.30402446176905,0.415045904808692,0.124980407962107,0.454947352624943,0.285465333544967,0.235265819698172,0,0.144921028610825,0.149254802886874,0.467426619694449,0.554805861502613,0,0,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0.414706207840855,0.53168342911599,0.521745061811734,0.150257608997218,0.380805212168795,0,0,0,0.928067519756987,0.398095888698616,0,0.343395705182793,0,0,0.770479321629213,0.214441591374926,0,0,0,0,0.179088841081487,0.308801447160972,0,0,0,0.168942440653073,0.512483037175893,0.345430341731199,0.303859956177382,4.83904526531058,0,0.132864840313363,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0.736423801007363,0,0,0.255788742607303,0.323474434190045,0.786329709279482,0.109209638192014,0.169732529954025,0.212574920101683,0,0,0.318004350653419,0,0,0,0,6.03754715906719,4.25089728976755,4.15048033548593,2.46139637088906,1.51243017733031,4.35690690524573,3.06803726700517,0,0.785181748008205,0.589848616738702,0.183428598521679,0.115525666150338,0,0,0,0.376051641746286,0.20170506870352,1.56302802246618,0,0,0.147856086217045,3.57949198477492,2.34323429584154,3.9270491335225,4.31227509318566,1.09394961803644,0,0,0,0,10.7140367175657,5.71682327772001,0,1.13831095675649,0.354809480650555,0.115233987555779,0.514464028312255,2.37894065418911,4.47254860227374,0.945550727071746,0.556157009460346,0.863424021355654,6.44173918655608,0,0.913158720509496,0.431855182437243,0.47775168788705,1.35805433935647,0.316027223465453,0,0,0,1.03608082081518,1.19502933965765,0.691259661814092,0.860454717640555,0.118332000730565,0.170426809518315,0,0,0.62041277132864,0,0.111855431797792,0,0.365753774946808,0.647428837187895,0.513314034281235,1.1598144313382,0.485710993059139,0,0.795803100645473,0,0.22589216407792,0.329821550236287,0.754814217833368,0.694567422971502,0.874238242015829,0.940634592723046,0.245148321753905,0,0.981542335574726,0.594092800654172,1.2679671827502,0,0.187967835959707,0.45120521581504,0,0,0.352894871715692,0.0802413666891683,1.46067277649303,0,0.573358332605805,1.10440093535229,3.39957450954573,5.67255897442491,1.5870805215462,0.371995018166751,1.84870251452567,0.432626562123789,0,0,0,0.305966489225945,0.26721740526556,0.18378979906969,0,0.303114792872958,0.267964130156178,0,0.724030971033267,0.426467963801962,0.476128862927481,0.258355639344024,0.682821857254437,0,0.636471582781649,0.606351566874658,0.217716747896961,0.684466602170562,0.5388164241167,0.358611026963382,0.332660356546013,0.0814032686109745,0.106727345877715,1.9307228228694,0.0898252021065869,0,0.611207220914332,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p1@LOC283050 | |||
}} |
Latest revision as of 11:37, 19 September 2015
Short description: | p1@LOC283050 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC283050_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_NR_015429, NR_024429, NR_024431, uc001jzx.2, uc001jzy.2, uc001jzz.2_5end |
EntrezGene: | LOC283050 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data