FFCP PHASE1:Hg19::chr11:109963610..109963630,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85463 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29362 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-295bp_to_uc010rwc.1_5end | |||
|cluster_id=chr11:109963610..109963630,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_ZC3H12C_5end | |||
|id=chr11:109963610..109963630,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.88e-14!45;CL:0002057!2.69e-14!42;CL:0002009!1.04e-13!65;CL:0002194!5.62e-13!63;CL:0000576!5.62e-13!63;CL:0000040!5.62e-13!63;CL:0000559!5.62e-13!63;CL:0000557!1.85e-10!71;CL:0000839!2.73e-09!70;CL:0000766!8.17e-09!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.32e-18;33!CL:0002057;7.32e-18;33!CL:0000473;1.41e-14;39!CL:0000234;1.41e-14;39!CL:0000576;8.44e-11;48!CL:0000766;7.46e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.15e-18,42;CL:0002057,9.15e-18,42;CL:0000473,1.14e-17,48;CL:0000234,1.14e-17,48;CL:0002009,2.41e-15,61;CL:0002194,2.45e-14,59;CL:0000576,2.45e-14,59;CL:0000040,2.45e-14,59;CL:0000559,2.45e-14,59;CL:0000557,1.17e-12,67;CL:0000839,2.32e-11,66;CL:0000766,3.42e-11,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.18e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!6.97e-15!659;UBERON:0000922!2.89e-14!612;UBERON:0000062!5.79e-14!511;UBERON:0000467!6.34e-14!625;UBERON:0000480!1.19e-13!626;UBERON:0002050!2.52e-13!605;UBERON:0005423!2.52e-13!605;UBERON:0000923!5.50e-13!604;UBERON:0005291!5.50e-13!604;UBERON:0006598!5.50e-13!604;UBERON:0002532!5.50e-13!604;UBERON:0001049!2.55e-10!57;UBERON:0005068!2.55e-10!57;UBERON:0006241!2.55e-10!57;UBERON:0007135!2.55e-10!57;UBERON:0007023!1.06e-09!115;UBERON:0002616!2.98e-09!59;UBERON:0000955!2.20e-08!69;UBERON:0006238!2.20e-08!69;UBERON:0000073!3.20e-08!94;UBERON:0001016!3.20e-08!94;UBERON:0002371!3.37e-08!80;UBERON:0002346!3.51e-08!90;UBERON:0001474!5.31e-08!86;UBERON:0003075!1.02e-07!86;UBERON:0007284!1.02e-07!86;UBERON:0002780!1.46e-07!41;UBERON:0001890!1.46e-07!41;UBERON:0006240!1.46e-07!41;UBERON:0003080!1.49e-07!42;UBERON:0001017!1.65e-07!82;UBERON:0004765!3.34e-07!101;UBERON:0001434!3.34e-07!101;UBERON:0004111!4.80e-07!241;UBERON:0005743!5.17e-07!86;UBERON:0000924!5.73e-07!173;UBERON:0006601!5.73e-07!173;UBERON:0001893!6.30e-07!34;UBERON:0002020!6.50e-07!34;UBERON:0003528!6.50e-07!34;UBERON:0002791!8.94e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.07e-10,76;UBERON:0001474,5.83e-10,82;UBERON:0002405,1.16e-08,93;UBERON:0001049,1.79e-08,56;UBERON:0005068,1.79e-08,56;UBERON:0006241,1.79e-08,56;UBERON:0007135,1.79e-08,56;UBERON:0004765,1.92e-08,90;UBERON:0000922,1.36e-07,592;UBERON:0001434,3.08e-07,100;UBERON:0007023,3.37e-07,114;UBERON:0002346,3.38e-07,86;UBERON:0000073,3.69e-07,53;UBERON:0002616,3.69e-07,53;UBERON:0003075,6.30e-07,82;UBERON:0007284,6.30e-07,82;UBERON:0002193,7.77e-07,108 | |||
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| |||
|short_description=p4@ZC3H12C | |||
}} |
Latest revision as of 01:18, 25 September 2015
Short description: | p4@ZC3H12C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ZC3H12C_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -295bp_to_uc010rwc.1_5end |
EntrezGene: | ZC3H12C |
HGNC: | 29362 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.15e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.15e-18 | 42 |
defensive cell | 1.14e-17 | 48 |
phagocyte | 1.14e-17 | 48 |
macrophage dendritic cell progenitor | 2.41e-15 | 61 |
monopoietic cell | 2.45e-14 | 59 |
monocyte | 2.45e-14 | 59 |
monoblast | 2.45e-14 | 59 |
promonocyte | 2.45e-14 | 59 |
granulocyte monocyte progenitor cell | 1.17e-12 | 67 |
myeloid lineage restricted progenitor cell | 2.32e-11 | 66 |
myeloid leukocyte | 3.42e-11 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.07e-10 | 76 |
bone element | 5.83e-10 | 82 |
immune system | 1.16e-08 | 93 |
neural tube | 1.79e-08 | 56 |
neural rod | 1.79e-08 | 56 |
future spinal cord | 1.79e-08 | 56 |
neural keel | 1.79e-08 | 56 |
skeletal element | 1.92e-08 | 90 |
embryo | 1.36e-07 | 592 |
skeletal system | 3.08e-07 | 100 |
adult organism | 3.37e-07 | 114 |
neurectoderm | 3.38e-07 | 86 |
regional part of nervous system | 3.69e-07 | 53 |
regional part of brain | 3.69e-07 | 53 |
neural plate | 6.30e-07 | 82 |
presumptive neural plate | 6.30e-07 | 82 |
hemolymphoid system | 7.77e-07 | 108 |