FFCP PHASE1:Hg19::chr11:121406392..121406396,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:121406392..121406396,+ | |||
|description=CAGE_peak_at_chr11:121406392..121406396,+ | |||
|id=chr11:121406392..121406396,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.40e-18!140;CL:0002087!8.83e-18!119;CL:0000037!1.85e-15!172;CL:0000566!1.85e-15!172;CL:0002032!3.39e-14!165;CL:0000837!3.39e-14!165;CL:0000838!7.39e-14!52;CL:0000988!9.78e-14!182;CL:0002031!1.26e-13!124;CL:0000542!1.88e-13!53;CL:0000051!1.88e-13!53;CL:0000791!6.63e-12!18;CL:0000789!6.63e-12!18;CL:0002420!6.63e-12!18;CL:0002419!6.63e-12!18;CL:0000790!6.63e-12!18;CL:0000084!2.29e-10!25;CL:0000827!2.29e-10!25;CL:0000624!1.45e-07!6;CL:0002057!2.94e-07!42;CL:0000625!3.76e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.13e-17;3!CL:0000771;1.09e-07;2!CL:0000815;1.75e-07;2!CL:0000792;1.75e-07;2!CL:0002677;1.75e-07;2!CL:0000094;2.69e-07;8!CL:0000791;7.99e-07;18!CL:0000789;7.99e-07;18!CL:0002419;7.99e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.18e-17,3;CL:0000825,1.18e-17,3;CL:0000771,1.05e-07,2;CL:0000815,1.87e-07,2;CL:0000792,1.87e-07,2;CL:0002677,1.87e-07,2;CL:0000094,2.77e-07,8;CL:0000791,8.84e-07,18;CL:0000789,8.84e-07,18;CL:0002420,8.84e-07,18;CL:0002419,8.84e-07,18;CL:0000790,8.84e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.24e-14;1!CL:0000790;7.99e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.92e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;4.24e-14;1!UBERON:0001785;4.24e-14;1!UBERON:0002464;4.24e-14;1!UBERON:0004904;4.24e-14;1!UBERON:0001021;4.24e-14;1!UBERON:0000178;2.00e-13;15!UBERON:0000179;2.00e-13;15!UBERON:0000463;2.00e-13;15!UBERON:0003714;1.09e-07;2!UBERON:0005162;1.09e-07;2!UBERON:0000122;1.09e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.50e-14,1;UBERON:0001785,3.50e-14,1;UBERON:0002464,3.50e-14,1;UBERON:0004904,3.50e-14,1;UBERON:0001021,3.50e-14,1;UBERON:0003902,3.50e-14,1;UBERON:0005425,3.50e-14,1;UBERON:0000178,1.81e-13,15;UBERON:0000179,1.81e-13,15;UBERON:0000463,1.81e-13,15;UBERON:0003714,9.87e-08,2;UBERON:0005162,9.87e-08,2;UBERON:0000122,9.87e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0.767658796194425,0.309632246632152,0,0,0,0.154934401160603,0.142169232487422,0,1.10799081706375,0.802177789880567,0.868043482863407,0,0.32389366601898,0,0.726991193897824,0,0.242584061187816,0,0,0,0.28769239232215,0,0,0,0,0,0.564727018627814,0,0.224723484445085,0,0,0.639337125799041,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0,0,0.786300418025466,0.450530678524519,0.16072558669708,0.285012743741249,0.59675003159727,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0.590129310341499,0,0.822405995998037,0,0.651844533267181,1.89379122293893,1.94826728407911,0.334231370655521,1.17842362989935,0.664601683750863,0.541607727530031,0.512365278902701,0.130059347559878,0.328875809207352,0.276350017785848,0,0.444859689486181,0.802622484269139,1.04535523804977,0.113309342697566,0.383220493601921,0.68725489096526,0.253019692019503,0.318565414324097,0,0,0.451725357233318,0,0,0.236777252044017,0.821127996921047,0.80642697289893,1.06976078313403,3.04131248153878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,1.2937654491571,2.18183161675572,0,0,0,0,0,0.749007023947182,0,2.07207756718018,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.2942852049117,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0.714695326373367,1.64544909234478,0,1.08006287447623,1.58625035258854,0,0,0.245040215981032,0,0,0,0,0.199579371432817,0.191505370132367,0,0,0,0.228234679033192,0.156679895773023,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0.221158519862449,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0.182454789215666,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0.161475645631851,2.85538840518309,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0.115233987555779,0,0.135939465953663,0.0657727735628491,0,0.222462803784138,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr11:121406392..121406396,+ | |||
}} |
Latest revision as of 19:13, 23 July 2015
Short description: | p@chr11:121406392..121406396, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:121406392..121406396, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.18e-17 | 3 |
pro-NK cell | 1.18e-17 | 3 |
eosinophil | 1.05e-07 | 2 |
regulatory T cell | 1.87e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.87e-07 | 2 |
naive regulatory T cell | 1.87e-07 | 2 |
granulocyte | 2.77e-07 | 8 |
mature alpha-beta T cell | 8.84e-07 | 18 |
alpha-beta T cell | 8.84e-07 | 18 |
immature T cell | 8.84e-07 | 18 |
mature T cell | 8.84e-07 | 18 |
immature alpha-beta T cell | 8.84e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.50e-14 | 1 |
cranial nerve | 3.50e-14 | 1 |
nerve trunk | 3.50e-14 | 1 |
nerve connecting eye with brain | 3.50e-14 | 1 |
nerve | 3.50e-14 | 1 |
retinal neural layer | 3.50e-14 | 1 |
presumptive neural retina | 3.50e-14 | 1 |
blood | 1.81e-13 | 15 |
haemolymphatic fluid | 1.81e-13 | 15 |
organism substance | 1.81e-13 | 15 |
neural tissue | 9.87e-08 | 2 |
multi cell component structure | 9.87e-08 | 2 |
neuron projection bundle | 9.87e-08 | 2 |