FFCP PHASE1:Hg19::chr11:3078838..3078876,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=833 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1493 | |||
|TSSclassifier=strong | |||
|UniProt=P49589 | |||
|association_with_transcript=0bp_to_ENST00000397111_5end | |||
|cluster_id=chr11:3078838..3078876,- | |||
|coexpression_cluster_id=C193 | |||
|description=CAGE_peak_6_at_CARS_5end | |||
|id=chr11:3078838..3078876,- | |||
|ontology_enrichment_celltype=CL:0000136!1.78e-24!15;CL:0002334!4.04e-12!12;CL:0000188!4.63e-10!9;CL:0002521!4.56e-08!3;CL:0002615!5.70e-08!3;CL:0000325!3.52e-07!39;CL:0000594!7.01e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000136;8.51e-103;13!CL:0002521;1.71e-25;3!CL:0002615;3.16e-25;3!CL:0002617;2.87e-17;2!CL:0002561;1.83e-16;2!CL:0002564;1.01e-11;3!CL:0002616;2.45e-09;1!CL:0002591;4.32e-09;1!CL:0002559;4.03e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.14e-89,15;CL:0002521,1.71e-25,3;CL:0002615,3.88e-25,3;CL:0002617,2.65e-17,2;CL:0002561,1.33e-16,2;CL:0002564,1.04e-11,3;CL:0002616,2.16e-09,1;CL:0002591,5.72e-09,1;CL:0002559,3.56e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002072!3.60e-11!5;UBERON:0003688!1.56e-09!6;UBERON:0002358!1.56e-09!6;UBERON:0003684!1.56e-09!6;UBERON:0001178!1.56e-09!6;UBERON:0002190!4.56e-08!3;UBERON:0001013!2.75e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;1.71e-25;3!UBERON:0004457;2.81e-22;9!UBERON:0000042;2.81e-22;9!UBERON:0003688;5.78e-22;6!UBERON:0002358;5.78e-22;6!UBERON:0003684;5.78e-22;6!UBERON:0001178;5.78e-22;6!UBERON:0001013;1.50e-20;14!UBERON:0005933;1.83e-16;2!UBERON:0005942;1.83e-16;2!UBERON:0005932;1.83e-16;2!UBERON:0004905;3.79e-16;8!UBERON:0000982;3.79e-16;8!UBERON:0004770;3.79e-16;8!UBERON:0002072;1.53e-15;5!UBERON:0011135;4.65e-15;5!UBERON:0002216;4.65e-15;5!UBERON:0011134;4.65e-15;5!UBERON:0002209;4.65e-15;5!UBERON:0002213;4.65e-15;5!UBERON:0007844;4.65e-15;5!UBERON:0011138;4.65e-15;5!UBERON:0001130;4.65e-15;5!UBERON:0001066;4.65e-15;5!UBERON:0001468;4.65e-15;5!UBERON:0002242;1.01e-11;3!UBERON:0000310;7.87e-08;10!UBERON:0001443;3.69e-07;11!UBERON:0002073;4.03e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.71e-25,3;UBERON:0003688,6.80e-22,6;UBERON:0002358,6.80e-22,6;UBERON:0003684,6.80e-22,6;UBERON:0001178,6.80e-22,6;UBERON:0001013,1.55e-20,14;UBERON:0004457,1.23e-16,12;UBERON:0000042,1.23e-16,12;UBERON:0005933,1.33e-16,2;UBERON:0005942,1.33e-16,2;UBERON:0005932,1.33e-16,2;UBERON:0004905,3.57e-16,8;UBERON:0000982,3.57e-16,8;UBERON:0004770,3.57e-16,8;UBERON:0002072,1.53e-15,5;UBERON:0011135,4.23e-15,5;UBERON:0002216,4.23e-15,5;UBERON:0011134,4.23e-15,5;UBERON:0002209,4.23e-15,5;UBERON:0002213,4.23e-15,5;UBERON:0005856,4.23e-15,5;UBERON:0005866,4.23e-15,5;UBERON:0005863,4.23e-15,5;UBERON:0007844,4.23e-15,5;UBERON:0011138,4.23e-15,5;UBERON:0001130,4.23e-15,5;UBERON:0001066,4.23e-15,5;UBERON:0001468,4.23e-15,5;UBERON:0002242,1.04e-11,3;UBERON:0003068,1.04e-11,3;UBERON:0002328,1.04e-11,3;UBERON:0004880,1.04e-11,3;UBERON:0000310,7.96e-08,10;UBERON:0002073,3.56e-07,5;UBERON:0005086,3.56e-07,5;UBERON:0001443,3.73e-07,11 | |||
|phase1_expression=3.81524596468169,3.63970890614671,6.76581139660662,2.00146596706261,6.70441641640932,2.61701557230111,5.06599756336621,5.05375898741465,7.05201196139564,0,0,0,0,2.72285976512103,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0.413303124703062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0.194874010322397,0,0,0.161646056818812,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,1.85747171212792,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,17.8828222925941,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4538298343828,3.50119364741774,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,2.23297027036899,0,0.280660094433074,2.30650468660262,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.767518373630648,0.137836572484531,1.18162269355101,0.870100163485371,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,1.26664581178598,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,8.16026705054211,1.7548292581589,4.28883807468846,1.63936315354902,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0.889811221596536,0,0,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0.12729431655633,0,0,0,0,0.143444410785353,0,0,0,0,0.0898252021065869,0,0,0,0.665756774185513,0.603821380773079,0 | |||
|short_description=p6@CARS | |||
}} |
Latest revision as of 14:11, 17 September 2015
Short description: | p6@CARS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CARS_5end |
Coexpression cluster: | C193_Mesenchymal_Adipocyte_mature_Cardiac_heart_CD14CD16_CD14 |
Association with transcript: | 0bp_to_ENST00000397111_5end |
EntrezGene: | CARS |
HGNC: | 1493 |
UniProt: | P49589 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.14e-89 | 15 |
subcutaneous fat cell | 1.71e-25 | 3 |
adipocyte of omentum tissue | 3.88e-25 | 3 |
adipocyte of breast | 2.65e-17 | 2 |
outer root sheath cell | 1.33e-16 | 2 |
nucleus pulposus cell of intervertebral disc | 1.04e-11 | 3 |
perirenal adipocyte cell | 2.16e-09 | 1 |
smooth muscle cell of the pulmonary artery | 5.72e-09 | 1 |
hair follicle cell | 3.56e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 1.71e-25 | 3 |
omentum | 6.80e-22 | 6 |
peritoneum | 6.80e-22 | 6 |
abdominal cavity | 6.80e-22 | 6 |
visceral peritoneum | 6.80e-22 | 6 |
adipose tissue | 1.55e-20 | 14 |
cavity lining | 1.23e-16 | 12 |
serous membrane | 1.23e-16 | 12 |
hair root sheath | 1.33e-16 | 2 |
hair outer root sheath | 1.33e-16 | 2 |
bulb of hair follicle | 1.33e-16 | 2 |
articulation | 3.57e-16 | 8 |
skeletal joint | 3.57e-16 | 8 |
articular system | 3.57e-16 | 8 |
hypodermis | 1.53e-15 | 5 |
intervertebral cartilage | 4.23e-15 | 5 |
symphysis | 4.23e-15 | 5 |
nonsynovial joint | 4.23e-15 | 5 |
fibrous joint | 4.23e-15 | 5 |
cartilaginous joint | 4.23e-15 | 5 |
developing mesenchymal condensation | 4.23e-15 | 5 |
pre-cartilage condensation | 4.23e-15 | 5 |
cartilaginous condensation | 4.23e-15 | 5 |
cartilage element | 4.23e-15 | 5 |
post-cranial axial skeletal system | 4.23e-15 | 5 |
vertebral column | 4.23e-15 | 5 |
intervertebral disk | 4.23e-15 | 5 |
intervertebral joint | 4.23e-15 | 5 |
nucleus pulposus | 1.04e-11 | 3 |
axial mesoderm | 1.04e-11 | 3 |
notochord | 1.04e-11 | 3 |
chordamesoderm | 1.04e-11 | 3 |
breast | 7.96e-08 | 10 |
hair follicle | 3.56e-07 | 5 |
hair follicle placode | 3.56e-07 | 5 |
chest | 3.73e-07 | 11 |