FFCP PHASE1:Hg19::chr11:88092856..88092865,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:88092856..88092865,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr11:88092856..88092865,- | |||
|id=chr11:88092856..88092865,- | |||
|ontology_enrichment_celltype=CL:0000945!6.85e-20!24;CL:0000826!6.85e-20!24;CL:0000838!9.52e-16!52;CL:0000542!1.95e-15!53;CL:0000051!1.95e-15!53;CL:0002127!6.22e-15!1;CL:0000914!6.22e-15!1;CL:0000911!6.22e-15!1;CL:0000814!6.22e-15!1;CL:0002042!6.22e-15!1;CL:0002039!6.22e-15!1;CL:0002040!6.22e-15!1;CL:0002041!6.22e-15!1;CL:0002032!3.80e-10!165;CL:0000837!3.80e-10!165;CL:0000037!1.12e-09!172;CL:0000566!1.12e-09!172;CL:0000988!4.57e-09!182;CL:0000893!4.09e-08!2;CL:0002489!4.09e-08!2;CL:0000809!4.09e-08!2;CL:0000808!4.09e-08!2;CL:0000894!4.09e-08!2;CL:0000806!4.09e-08!2;CL:0000807!4.09e-08!2;CL:0000805!4.09e-08!2;CL:0002425!4.09e-08!2;CL:0002087!4.50e-08!119;CL:0002031!1.04e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0002127;1.48e-40;1!CL:0000911;1.48e-40;1!CL:0000814;1.48e-40;1!CL:0000945;5.93e-27;24!CL:0000542;1.72e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.48e-40,1;CL:0000914,1.48e-40,1;CL:0000911,1.48e-40,1;CL:0000814,1.48e-40,1;CL:0002042,1.48e-40,1;CL:0002039,1.48e-40,1;CL:0002040,1.48e-40,1;CL:0002041,1.48e-40,1;CL:0000945,5.93e-27,24;CL:0000826,5.93e-27,24;CL:0000893,4.66e-21,2;CL:0002489,4.66e-21,2;CL:0000809,4.66e-21,2;CL:0000808,4.66e-21,2;CL:0000894,4.66e-21,2;CL:0000806,4.66e-21,2;CL:0000807,4.66e-21,2;CL:0000805,4.66e-21,2;CL:0002425,4.66e-21,2;CL:0000838,1.25e-19,52;CL:0000542,2.83e-19,53;CL:0000051,2.83e-19,53;CL:0002087,3.65e-09,115;CL:0002031,8.28e-09,120;CL:0000738,7.64e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002425;4.66e-21;2!CL:0000051;1.72e-09;53 | |||
|ontology_enrichment_disease=DOID:630!1.07e-14!1;DOID:0050177!1.07e-14!1;DOID:0050427!1.07e-14!1;DOID:2355!1.41e-14!1;DOID:2531!4.27e-12!51;DOID:0060083!4.27e-12!51;DOID:1240!2.14e-08!39;DOID:4468!5.02e-08!2;DOID:74!6.15e-08!2;DOID:1036!1.76e-07!8 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.37e-08!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.10e-11,4;UBERON:0005058,3.10e-11,4;UBERON:0009113,3.10e-11,4;UBERON:0003295,3.10e-11,4;UBERON:0005562,3.10e-11,4;UBERON:0003351,6.34e-08,6;UBERON:0004177,5.70e-07,7;UBERON:0005057,5.70e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60468152070698,1.23150884174919,1.33808328233255,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34502172792233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84627208191604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0.167821586975843,0,0,0.843992258112108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p@chr11:88092856..88092865,- | |||
}} |
Latest revision as of 03:23, 24 July 2015
Short description: | p@chr11:88092856..88092865, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:88092856..88092865, - |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.48e-40 | 1 |
immature NK T cell | 1.48e-40 | 1 |
effector T cell | 1.48e-40 | 1 |
mature NK T cell | 1.48e-40 | 1 |
immature NK T cell stage IV | 1.48e-40 | 1 |
immature NK T cell stage I | 1.48e-40 | 1 |
immature NK T cell stage II | 1.48e-40 | 1 |
immature NK T cell stage III | 1.48e-40 | 1 |
lymphocyte of B lineage | 5.93e-27 | 24 |
pro-B cell | 5.93e-27 | 24 |
thymocyte | 4.66e-21 | 2 |
double negative thymocyte | 4.66e-21 | 2 |
double-positive, alpha-beta thymocyte | 4.66e-21 | 2 |
DN4 thymocyte | 4.66e-21 | 2 |
DN1 thymic pro-T cell | 4.66e-21 | 2 |
DN2 thymocyte | 4.66e-21 | 2 |
DN3 thymocyte | 4.66e-21 | 2 |
immature single positive thymocyte | 4.66e-21 | 2 |
early T lineage precursor | 4.66e-21 | 2 |
lymphoid lineage restricted progenitor cell | 1.25e-19 | 52 |
lymphocyte | 2.83e-19 | 53 |
common lymphoid progenitor | 2.83e-19 | 53 |
nongranular leukocyte | 3.65e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.28e-09 | 120 |
leukocyte | 7.64e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.10e-11 | 4 |
hemolymphoid system gland | 3.10e-11 | 4 |
thymic region | 3.10e-11 | 4 |
pharyngeal gland | 3.10e-11 | 4 |
thymus primordium | 3.10e-11 | 4 |
pharyngeal epithelium | 6.34e-08 | 6 |
hemopoietic organ | 5.70e-07 | 7 |
immune organ | 5.70e-07 | 7 |