FFCP PHASE1:Hg19::chr12:8850618..8850628,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57494 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29228 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-4bp_to_ENST00000299673_5end | |||
|cluster_id=chr12:8850618..8850628,+ | |||
|description=CAGE_peak_9_at_RIMKLB_5end | |||
|id=chr12:8850618..8850628,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000228;7.38e-11;1!CL:0002372;7.38e-11;1!CL:0000037;1.98e-10;1!CL:0001024;1.98e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,7.40e-11,1;CL:0002372,7.40e-11,1;CL:0001024,3.01e-10,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;1.98e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.57e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!5.12e-08!82;UBERON:0007023!6.32e-08!115;UBERON:0005743!1.29e-07!86;UBERON:0000073!3.27e-07!94;UBERON:0001016!3.27e-07!94;UBERON:0001049!3.90e-07!57;UBERON:0005068!3.90e-07!57;UBERON:0006241!3.90e-07!57;UBERON:0007135!3.90e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;1.98e-10;1!UBERON:0000026;1.98e-10;1!UBERON:0008784;1.98e-10;1!UBERON:0006058;1.98e-10;1!UBERON:0003663;1.98e-10;1!UBERON:0004256;1.98e-10;1!UBERON:0004708;1.98e-10;1!UBERON:0002101;1.98e-10;1!UBERON:0004709;1.98e-10;1!UBERON:0002529;1.98e-10;1!UBERON:0010538;1.98e-10;1!UBERON:0003661;1.98e-10;1!UBERON:0010890;1.98e-10;1!UBERON:0002471;1.98e-10;1!UBERON:0001383;1.98e-10;1!UBERON:0010758;1.98e-10;1!UBERON:0010707;1.98e-10;1!UBERON:0000978;1.98e-10;1!UBERON:0002103;1.98e-10;1!UBERON:0001665;1.98e-10;1!UBERON:0003823;1.98e-10;1!UBERON:0000154;1.98e-10;1!UBERON:0010709;1.98e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,2.08e-10,1;UBERON:0001389,2.08e-10,1;UBERON:0000026,2.08e-10,1;UBERON:0008784,2.08e-10,1;UBERON:0006058,2.08e-10,1;UBERON:0003663,2.08e-10,1;UBERON:0004256,2.08e-10,1;UBERON:0004708,2.08e-10,1;UBERON:0002101,2.08e-10,1;UBERON:0004709,2.08e-10,1;UBERON:0002529,2.08e-10,1;UBERON:0010538,2.08e-10,1;UBERON:0003661,2.08e-10,1;UBERON:0010890,2.08e-10,1;UBERON:0002471,2.08e-10,1;UBERON:0001383,2.08e-10,1;UBERON:0004357,2.08e-10,1;UBERON:0004347,2.08e-10,1;UBERON:0005420,2.08e-10,1;UBERON:0005732,2.08e-10,1;UBERON:0010758,2.08e-10,1;UBERON:0010707,2.08e-10,1;UBERON:0000978,2.08e-10,1;UBERON:0002103,2.08e-10,1;UBERON:0001665,2.08e-10,1;UBERON:0003823,2.08e-10,1;UBERON:0000154,2.08e-10,1;UBERON:0010709,2.08e-10,1;UBERON:0005733,2.08e-10,1;UBERON:0005730,2.08e-10,1 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0.331397375727916,0.672325146451775,0,0,0,0.246242116153576,0,0,0.572471974262113,0.410623275218653,0.502170558379211,0,0,0,0,0,0.309632246632152,0,0,0,0.46480320348181,0,1.17440175733939,0,0.401088894940283,0,0,0,0.515151135268373,0.290796477559129,0.377875943688809,0,0.464858073811369,0.411167888021826,0.309706370895104,0,0,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0,0,0.329851300186716,0,0,0.290209238628584,1.13477044938228,0,0,0,0,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0.209658645508376,0,0,0,0.285012743741249,0.39783335439818,0,1.75996244461323,0,0,0,0,0.574752439954483,0,0.954053754535364,1.1384259382189,0,0,0,0.560508562981536,0.526768169550154,0.196709770113833,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0.267540828089713,1.04535523804977,0,0,0.34362744548263,0,0,0,1.90090408889675,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.255725123687061,0,0,0,0,0,0.283604451492204,0,0.087834785693126,0.589405839739707,0,0.370784442784429,0,0,0.132957960518865,0.238490624305342,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0.56530794192401,0,0,0.208994966536811,0.516833518338658,0,0.33472061276467,0,0,0.488124115096339,0.735326160691737,0,0.267899184852239,0.44905874525234,0.225222960966644,1.53316637465883,0,0.366403487860815,0,0,0,0,0.25326102332916,0.397227542439656,1.72101972449288,0.354668382198357,0,0,0,0,0.538842688278752,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0.718618141816238,0.168336113954066,0,0,0,0,0,0.113432183160021,0.358779271377724,0,0.211931901159562,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.403008392910561,0,0,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0.220587945464788,0.217879444092406,0,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0.325808305310325,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0.088048434013226,0,0.432359860250884,0.37872730027914,0.190493682876507,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.1466765716419,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0.502257091432126,0,0.239624855491583,0,2.85273810081437,0,0,0.179060963239896,0,0,0,0.128343036279748,0,1.30139853857622,0,0.837581326671744,1.27587750330633,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0.114814448164607,0,0.393373244878272,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0.657779629937804,0,0,0,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0,0,0.178064071293475,0.165284915360978,0.192190067365106,0.382838137483752,0.30347334256665,0,0.62962469366128,0,0,0,0,0,0.286249773483982,0,0.632758849437452,0,0,0,0,0,0.359744915166629,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0.648473311192717,0,0,0,0,0.245040215981032,0.371606350251437,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0.307240764308458,0,0,0,0,0,0.270455678475983,0,1.4098700508785,0,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0,0,0.140669416410513,0.111308705022906,0,0,0.597743964753209,0,0,0,0.123084805461069,0.311039587661807,0.0898683511473268,0.179021174675609,0,0.197286811273867,0,0,0,0.0927680981618513,3.99227596002388,0.520855522170466,0,0,0,0,0,0.344743373241465,0.291604613383254,0.347249989866585,0,0.361789315876224,0,0.995213339381022,0,0.658156191461918,0.32681539055697,0.278847488557207,0.307801034015188,0.113942055847001,0,0.448788222048861,0,0,0,0,0,0.156980256395025,0,0,0.392125068635479,0.167821586975843,0,0,0,0.489698424477443,0,0.432777279484182,0.995261931078505,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.468528891450678,0.364909578431332,0,0.242780379534093,0.789168805698781,0,1.22429104652196,0.252746318513952,0.150323419414493,0.103688191397247,0,0.330991955875499,0,0,0.284609546029793,0,0,0,0.174118413160805,0,0.171986032471617,0,0,0.0821154570532092,0.290967049465258,0.353024506766001,0.225980740780532,0,0,0.0633107959558787,0,0,0,0.19980960958213,0,0.114536596165916,0,0,0,0.235694034616795,0.271808412147228,0,0.203996435272644,0,0.600420288709789,0.136905378891993,0,0,0,0,0.229160424011684,0.717873024576814,0.199679000498991,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0.681017030557878,0,0.275078873194468,0.415440338029185,0.2249738915515,0,0.364497339948148,0,0.0788057072991982,0.367182116944987,0.633602019116439,0.179287339332845,0.191915197319445,0.714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| |||
|short_description=p9@RIMKLB | |||
}} |
Latest revision as of 05:43, 25 September 2015
Short description: | p9@RIMKLB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RIMKLB_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000299673_5end |
EntrezGene: | RIMKLB |
HGNC: | 29228 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 7.40e-11 | 1 |
myotube | 7.40e-11 | 1 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.01e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 2.08e-10 | 1 |
soleus muscle | 2.08e-10 | 1 |
appendage | 2.08e-10 | 1 |
lower limb segment | 2.08e-10 | 1 |
multi-limb segment region | 2.08e-10 | 1 |
hindlimb muscle | 2.08e-10 | 1 |
hindlimb zeugopod muscle | 2.08e-10 | 1 |
paired limb/fin | 2.08e-10 | 1 |
limb | 2.08e-10 | 1 |
pelvic appendage | 2.08e-10 | 1 |
limb segment | 2.08e-10 | 1 |
paired limb/fin segment | 2.08e-10 | 1 |
limb muscle | 2.08e-10 | 1 |
pelvic complex muscle | 2.08e-10 | 1 |
zeugopod | 2.08e-10 | 1 |
muscle of leg | 2.08e-10 | 1 |
paired limb/fin bud | 2.08e-10 | 1 |
limb bud | 2.08e-10 | 1 |
pelvic appendage bud | 2.08e-10 | 1 |
limb/fin field | 2.08e-10 | 1 |
subdivision of organism along appendicular axis | 2.08e-10 | 1 |
appendage girdle complex | 2.08e-10 | 1 |
leg | 2.08e-10 | 1 |
hindlimb | 2.08e-10 | 1 |
triceps surae | 2.08e-10 | 1 |
hindlimb zeugopod | 2.08e-10 | 1 |
posterior region of body | 2.08e-10 | 1 |
pelvic complex | 2.08e-10 | 1 |
limb field | 2.08e-10 | 1 |
hindlimb/pelvic fin field | 2.08e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.57e-10 | 1 |