FFCP PHASE1:Hg19::chr12:92081022..92081033,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:92081022..92081033,- | |||
|coexpression_cluster_id=C221 | |||
|description=CAGE_peak_at_chr12:92081022..92081033,- | |||
|id=chr12:92081022..92081033,- | |||
|ontology_enrichment_celltype=CL:1000415!2.90e-18!2;CL:0002144!1.41e-12!3 | |||
|ontology_enrichment_celltype_v019=CL:0000322;1.85e-12;3!CL:0000082;5.73e-08;19!CL:0002138;8.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.85e-12,3;CL:0000082,5.73e-08,19;CL:0005020,9.49e-07,6;CL:0002138,9.49e-07,6;CL:0005022,9.49e-07,6 | |||
|ontology_enrichment_development_v019=CL:0005022;8.97e-07;6 | |||
|ontology_enrichment_disease=DOID:0050619!1.80e-10!1;DOID:1357!1.80e-10!1;DOID:3119!2.20e-10!14;DOID:305!3.40e-08!106;DOID:0050687!4.36e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.58e-34;1!DOID:1357;2.58e-34;1!DOID:1325;7.13e-20;7!DOID:3904;7.13e-20;7!DOID:0050615;2.33e-19;16!DOID:3910;5.48e-18;2!DOID:4929;7.67e-18;2!DOID:3905;1.05e-15;9!DOID:3119;1.99e-10;14!DOID:1324;7.75e-10;15!DOID:5409;1.57e-09;4!DOID:3908;5.35e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.58e-34,1;DOID:1357,2.58e-34,1;DOID:1325,7.13e-20,7;DOID:3904,7.13e-20,7;DOID:0050615,2.33e-19,16;DOID:3910,5.48e-18,2;DOID:4929,7.67e-18,2;DOID:3905,1.05e-15,9;DOID:3119,1.90e-10,14;DOID:1324,7.75e-10,15;DOID:5409,1.57e-09,4;DOID:3908,5.35e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002294!2.42e-20!7;UBERON:0001173!2.42e-20!7;UBERON:0004912!2.42e-20!7;UBERON:0001915!1.41e-12!3;UBERON:0001982!1.41e-12!3;UBERON:0002110!1.68e-12!3;UBERON:0006242!1.68e-12!3;UBERON:0001764!1.80e-10!1;UBERON:0001825!1.80e-10!1;UBERON:0004913!1.98e-10!1;UBERON:0003703!1.98e-10!1;UBERON:0001174!1.98e-10!1;UBERON:0004914!1.98e-10!1;UBERON:0002134!2.84e-10!1;UBERON:0005208!2.84e-10!1;UBERON:0005946!2.84e-10!1;UBERON:0005965!2.84e-10!1;UBERON:0002078!2.84e-10!1;UBERON:0002394!6.34e-10!4;UBERON:0003928!6.34e-10!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.58e-34;1!UBERON:0001825;2.58e-34;1!UBERON:0004913;3.61e-34;1!UBERON:0003703;3.61e-34;1!UBERON:0001174;3.61e-34;1!UBERON:0004914;3.61e-34;1!UBERON:0004903;5.48e-18;2!UBERON:0002173;5.48e-18;2!UBERON:0002186;5.48e-18;2!UBERON:0000058;2.66e-14;10!UBERON:0004821;1.85e-12;3!UBERON:0007499;1.85e-12;3!UBERON:0003215;1.85e-12;3!UBERON:0010368;1.85e-12;3!UBERON:0009911;1.85e-12;3!UBERON:0002299;1.85e-12;3!UBERON:0006524;1.85e-12;3!UBERON:0008874;1.85e-12;3!UBERON:0002169;1.85e-12;3!UBERON:0004894;1.85e-12;3!UBERON:0002114;2.31e-12;2!UBERON:0009856;1.12e-09;4!UBERON:0002394;1.32e-09;4!UBERON:0003928;1.32e-09;4!UBERON:0004802;5.73e-08;19!UBERON:0000115;5.73e-08;19!UBERON:0002108;6.13e-08;4!UBERON:0002048;5.24e-07;22!UBERON:0004807;5.24e-07;22!UBERON:0000117;5.24e-07;22!UBERON:0000171;5.24e-07;22!UBERON:0000170;5.24e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.58e-34,1;UBERON:0001825,2.58e-34,1;UBERON:0004913,3.61e-34,1;UBERON:0003703,3.61e-34,1;UBERON:0001174,3.61e-34,1;UBERON:0004914,3.61e-34,1;UBERON:0004903,5.48e-18,2;UBERON:0002173,5.48e-18,2;UBERON:0002186,5.48e-18,2;UBERON:0004821,1.85e-12,3;UBERON:0003215,1.85e-12,3;UBERON:0010368,1.85e-12,3;UBERON:0009911,1.85e-12,3;UBERON:0002299,1.85e-12,3;UBERON:0006524,1.85e-12,3;UBERON:0008874,1.85e-12,3;UBERON:0002169,1.85e-12,3;UBERON:0004894,1.85e-12,3;UBERON:0002114,2.31e-12,2;UBERON:0000058,5.35e-08,19;UBERON:0004802,5.73e-08,19;UBERON:0000115,5.73e-08,19;UBERON:0002108,6.13e-08,4;UBERON:0002048,5.24e-07,22;UBERON:0000117,5.24e-07,22;UBERON:0000171,5.24e-07,22;UBERON:0000170,5.24e-07,22;UBERON:0005597,5.24e-07,22;UBERON:0000118,5.24e-07,22;UBERON:0002394,8.02e-07,6;UBERON:0003928,8.02e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00416183829401,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.25099522974109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539210106883961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0.391102765469606,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81100156125867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21784129325568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490751168076215,0,0,0,0,0,0,1.98950775161368,0,1.92008339466232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:92081022..92081033,- | |||
}} |
Latest revision as of 13:30, 24 July 2015
Short description: | p@chr12:92081022..92081033, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:92081022..92081033, - |
Coexpression cluster: | C221_alveolar_Osteoblast_Myoblast_mesenchymal_liposarcoma_Smooth_hepatocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.85e-12 | 3 |
epithelial cell of lung | 5.73e-08 | 19 |
lymphangioblast | 9.49e-07 | 6 |
endothelial cell of lymphatic vessel | 9.49e-07 | 6 |
vascular lymphangioblast | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.58e-34 | 1 |
paranasal sinus | 2.58e-34 | 1 |
hepatopancreatic ampulla | 3.61e-34 | 1 |
extrahepatic bile duct | 3.61e-34 | 1 |
common bile duct | 3.61e-34 | 1 |
duodenal papilla | 3.61e-34 | 1 |
bronchoalveolar duct junction | 5.48e-18 | 2 |
alveolar duct | 5.48e-18 | 2 |
bronchiole | 5.48e-18 | 2 |
pulmonary alveolus epithelium | 1.85e-12 | 3 |
alveolus | 1.85e-12 | 3 |
pulmonary lobule | 1.85e-12 | 3 |
lobule | 1.85e-12 | 3 |
alveolus of lung | 1.85e-12 | 3 |
alveolar system | 1.85e-12 | 3 |
pulmonary acinus | 1.85e-12 | 3 |
alveolar sac | 1.85e-12 | 3 |
alveolar wall | 1.85e-12 | 3 |
duodenum | 2.31e-12 | 2 |
duct | 5.35e-08 | 19 |
respiratory tract epithelium | 5.73e-08 | 19 |
lung epithelium | 5.73e-08 | 19 |
small intestine | 6.13e-08 | 4 |
lung | 5.24e-07 | 22 |
respiratory tube | 5.24e-07 | 22 |
respiration organ | 5.24e-07 | 22 |
pair of lungs | 5.24e-07 | 22 |
lung primordium | 5.24e-07 | 22 |
lung bud | 5.24e-07 | 22 |
bile duct | 8.02e-07 | 6 |
digestive system duct | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.58e-34 | 1 |
maxillary sinus cancer | 2.58e-34 | 1 |
bronchus cancer | 7.13e-20 | 7 |
bronchogenic carcinoma | 7.13e-20 | 7 |
respiratory system cancer | 2.33e-19 | 16 |
lung adenocarcinoma | 5.48e-18 | 2 |
tubular adenocarcinoma | 7.67e-18 | 2 |
lung carcinoma | 1.05e-15 | 9 |
gastrointestinal system cancer | 1.90e-10 | 14 |
lung cancer | 7.75e-10 | 15 |
lung small cell carcinoma | 1.57e-09 | 4 |
non-small cell lung carcinoma | 5.35e-08 | 5 |