FFCP PHASE1:Hg19::chr13:41635759..41635774,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1997 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3316 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T9E7 | |||
|association_with_transcript=-183bp_to_ENST00000405737_5end | |||
|cluster_id=chr13:41635759..41635774,- | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_21_at_ELF1_5end | |||
|id=chr13:41635759..41635774,- | |||
|ontology_enrichment_celltype=CL:0000860!1.89e-23!45;CL:0002057!3.99e-23!42;CL:0002009!1.01e-16!65;CL:0002194!2.85e-16!63;CL:0000576!2.85e-16!63;CL:0000040!2.85e-16!63;CL:0000559!2.85e-16!63;CL:0000766!9.61e-16!76;CL:0000557!1.96e-15!71;CL:0000839!1.32e-14!70;CL:0000738!8.54e-12!140;CL:0002087!2.29e-10!119;CL:0002031!3.00e-10!124;CL:0000763!5.87e-10!112;CL:0000049!5.87e-10!112;CL:0000148!5.87e-09!10;CL:0000541!5.87e-09!10;CL:0002032!8.89e-08!165;CL:0000837!8.89e-08!165;CL:0000037!2.28e-07!172;CL:0000566!2.28e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000148;9.92e-43;10!CL:0000147;2.39e-30;14!CL:0002567;3.10e-27;3!CL:0000710;4.82e-21;20!CL:0000075;2.11e-15;27!CL:0002077;8.99e-11;34!CL:0002566;2.37e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.95e-43,10;CL:0000541,3.95e-43,10;CL:0000147,1.24e-30,14;CL:0002567,2.09e-27,3;CL:0000710,3.07e-21,20;CL:0000075,1.52e-15,27;CL:0002077,3.44e-12,34;CL:0002566,2.16e-10,1;CL:0000333,1.78e-09,41 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.00e-12;3!UBERON:0005425;6.05e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.66e-14!57;UBERON:0005068!5.66e-14!57;UBERON:0006241!5.66e-14!57;UBERON:0007135!5.66e-14!57;UBERON:0002371!2.17e-12!80;UBERON:0001017!1.76e-11!82;UBERON:0005743!2.26e-11!86;UBERON:0000073!6.62e-11!94;UBERON:0001016!6.62e-11!94;UBERON:0002616!9.21e-11!59;UBERON:0001474!9.50e-11!86;UBERON:0001893!1.27e-09!34;UBERON:0002020!1.72e-09!34;UBERON:0003528!1.72e-09!34;UBERON:0002390!3.47e-09!102;UBERON:0003061!3.47e-09!102;UBERON:0000955!3.99e-09!69;UBERON:0006238!3.99e-09!69;UBERON:0002780!4.50e-09!41;UBERON:0001890!4.50e-09!41;UBERON:0006240!4.50e-09!41;UBERON:0002791!6.66e-09!33;UBERON:0003080!1.03e-08!42;UBERON:0003075!1.17e-08!86;UBERON:0007284!1.17e-08!86;UBERON:0002405!4.72e-08!115;UBERON:0001869!5.62e-08!32;UBERON:0002298!7.13e-08!8;UBERON:0002346!7.48e-08!90;UBERON:0007023!1.13e-07!115;UBERON:0004765!1.30e-07!101;UBERON:0001434!1.30e-07!101;UBERON:0002193!2.06e-07!112;UBERON:0003076!4.90e-07!15;UBERON:0003057!4.90e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;6.05e-10;1!UBERON:0000941;6.05e-10;1!UBERON:0001785;6.05e-10;1!UBERON:0002464;6.05e-10;1!UBERON:0004904;6.05e-10;1!UBERON:0001021;6.05e-10;1!UBERON:0009661;6.05e-10;1!UBERON:0002950;6.05e-10;1!UBERON:0001891;6.05e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,5.79e-10,1;UBERON:0009661,5.79e-10,1;UBERON:0002950,5.79e-10,1;UBERON:0001891,5.79e-10,1;UBERON:0009616,5.79e-10,1;UBERON:0010286,5.79e-10,1;UBERON:0000941,6.91e-10,1;UBERON:0001785,6.91e-10,1;UBERON:0002464,6.91e-10,1;UBERON:0004904,6.91e-10,1;UBERON:0001021,6.91e-10,1;UBERON:0003902,6.91e-10,1;UBERON:0005425,6.91e-10,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,2.00146596706261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0.0787107813136792,0.786728553697808,0.767658796194425,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0,1.51907609501096,0.223915474239924,0,0,0,0.377875943688809,0.242584061187816,0.232429036905685,1.23350366406548,0.619412741790207,0.28769239232215,0.512321413058201,0.236482229888585,2.41321976515633,0,0,0.564727018627814,0.272906150057846,0,0.612167784741805,0.962787081228281,1.27867425159808,0.329851300186716,0.199463657621632,0,0.580418477257168,0.56738522469114,0,0.251248665256743,0,0.434377689410233,0.605399502633369,0.736555271975129,0.632924774881769,0.211255286311942,1.06302149982522,0.419317291016752,0.22465726229299,0.150176892841506,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0.0945348171640679,0,0,0.130979075497713,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0,0,0,0,2.53991577168676,2.29193055334967,3.51652341630141,1.71072446022705,2.87916979569306,1.8020583470635,10.0039251420702,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0.394061520403854,0.215627574859517,0.77005821767849,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0.362578348774867,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0.95497793895076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0.185536196323703,0,0.260427761085233,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0.296521128680622,0,0,0.67401132980677,0,0.234264445725339,0.182454789215666,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0.225980740780532,0,0,0.316553979779393,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64286454670392,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.315132729228895,0.164831716762333,0,0,0,0,0.136203406111576,0,0,0,1.349843349309,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.39669780522807,0.171086837884329,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.625954653532499,0.573409195690071,1.77486482458964,0.496771223531068,0.138348634936231,0,1.06154382279153,0.856396000634902,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0.80057074828547,0,0,0.192687675289379,0,0.478901577171454,0.41023272848151,0.252071696221718,0.276629009856872,0,1.42769420259154,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0.413373593002368,0.317079050969534,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.40781839786099,0.131545547125698,0,0,0,0,0.280272163313789,0,0,0,1.42953088353313,0,0,0.173858272302579,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0.111855431797792,0.196300467230486,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.392616934229891,1.48523200163543,0.8453114551668,0,0,0,0,0,0,0,0.730336388246517,0,1.43339583151451,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,1.55149493792843,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0,0,0.665756774185513,0,0.320568492303233 | |||
|short_description=p21@ELF1 | |||
}} |
Latest revision as of 08:52, 17 September 2015
Short description: | p21@ELF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_ELF1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -183bp_to_ENST00000405737_5end |
EntrezGene: | ELF1 |
HGNC: | 3316 |
UniProt: | Q5T9E7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.95e-43 | 10 |
melanoblast | 3.95e-43 | 10 |
pigment cell | 1.24e-30 | 14 |
light melanocyte | 2.09e-27 | 3 |
neurecto-epithelial cell | 3.07e-21 | 20 |
columnar/cuboidal epithelial cell | 1.52e-15 | 27 |
ecto-epithelial cell | 3.44e-12 | 34 |
dark melanocyte | 2.16e-10 | 1 |
migratory neural crest cell | 1.78e-09 | 41 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 5.79e-10 | 1 |
midbrain nucleus | 5.79e-10 | 1 |
regional part of midbrain | 5.79e-10 | 1 |
midbrain | 5.79e-10 | 1 |
presumptive midbrain | 5.79e-10 | 1 |
midbrain neural tube | 5.79e-10 | 1 |
cranial nerve II | 6.91e-10 | 1 |
cranial nerve | 6.91e-10 | 1 |
nerve trunk | 6.91e-10 | 1 |
nerve connecting eye with brain | 6.91e-10 | 1 |
nerve | 6.91e-10 | 1 |
retinal neural layer | 6.91e-10 | 1 |
presumptive neural retina | 6.91e-10 | 1 |