FFCP PHASE1:Hg19::chr14:24047434..24047457,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84502 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20156 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-5bp_to_ENST00000543864_5end | |||
|cluster_id=chr14:24047434..24047457,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_JPH4_5end | |||
|id=chr14:24047434..24047457,- | |||
|ontology_enrichment_celltype=CL:0000047!3.39e-12!8;CL:0000540!1.18e-09!6;CL:0000031!1.18e-09!6;CL:0000404!1.18e-09!6;CL:0002322!7.99e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000540;4.01e-13;6!CL:0000404;4.01e-13;6!CL:0002322;4.71e-12;5!CL:0002321;1.92e-09;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.05e-16,8;CL:0000540,4.35e-13,6;CL:0000031,4.35e-13,6;CL:0000404,4.35e-13,6;CL:0002322,6.62e-12,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.38e-15;82!CL:0000031;4.01e-13;6!UBERON:0006215;3.45e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.95e-63!94;UBERON:0001016!2.95e-63!94;UBERON:0001017!3.20e-63!82;UBERON:0005743!1.56e-61!86;UBERON:0001049!4.23e-59!57;UBERON:0005068!4.23e-59!57;UBERON:0006241!4.23e-59!57;UBERON:0007135!4.23e-59!57;UBERON:0002616!1.53e-49!59;UBERON:0002780!1.51e-48!41;UBERON:0001890!1.51e-48!41;UBERON:0006240!1.51e-48!41;UBERON:0003080!4.14e-47!42;UBERON:0000955!2.09e-46!69;UBERON:0006238!2.09e-46!69;UBERON:0002346!5.47e-45!90;UBERON:0003075!3.03e-42!86;UBERON:0007284!3.03e-42!86;UBERON:0001893!3.52e-42!34;UBERON:0007023!3.91e-42!115;UBERON:0002020!6.72e-42!34;UBERON:0003528!6.72e-42!34;UBERON:0002791!1.68e-40!33;UBERON:0001869!8.38e-40!32;UBERON:0002619!4.31e-34!22;UBERON:0000924!7.72e-34!173;UBERON:0006601!7.72e-34!173;UBERON:0003056!4.59e-32!61;UBERON:0004121!1.66e-31!169;UBERON:0001950!8.93e-31!20;UBERON:0000956!2.97e-29!25;UBERON:0000203!2.97e-29!25;UBERON:0000033!9.56e-25!123;UBERON:0000153!7.24e-24!129;UBERON:0007811!7.24e-24!129;UBERON:0002420!1.07e-14!9;UBERON:0007245!1.07e-14!9;UBERON:0010009!1.07e-14!9;UBERON:0010011!1.07e-14!9;UBERON:0000454!1.07e-14!9;UBERON:0002308!4.63e-14!9;UBERON:0000125!4.63e-14!9;UBERON:0003076!7.91e-13!15;UBERON:0003057!7.91e-13!15;UBERON:0009663!1.74e-11!7;UBERON:0004732!5.05e-11!13;UBERON:0000025!5.47e-11!194;UBERON:0000200!5.52e-11!6;UBERON:0001871!9.55e-11!7;UBERON:0000349!7.48e-10!5;UBERON:0004733!1.25e-09!12;UBERON:0002028!1.25e-09!12;UBERON:0007277!1.25e-09!12;UBERON:0001872!1.71e-09!5;UBERON:0002021!4.95e-09!5;UBERON:0004111!1.96e-08!241;UBERON:0002680!2.56e-08!9;UBERON:0001895!2.56e-08!9;UBERON:0010092!2.56e-08!9;UBERON:0000369!4.21e-08!4;UBERON:0002435!4.21e-08!4;UBERON:0000204!4.21e-08!4;UBERON:0010082!4.21e-08!4;UBERON:0001894!1.00e-07!7;UBERON:0006222!1.00e-07!7;UBERON:0000922!6.43e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.38e-50;32!UBERON:0001893;4.78e-49;34!UBERON:0003528;1.82e-48;34!UBERON:0002020;1.82e-48;34!UBERON:0002619;3.42e-48;22!UBERON:0002791;2.99e-47;32!UBERON:0001950;1.74e-43;20!UBERON:0000956;7.72e-42;25!UBERON:0000203;7.72e-42;25!UBERON:0002780;6.52e-41;41!UBERON:0001890;6.52e-41;41!UBERON:0000073;7.68e-38;53!UBERON:0002616;7.68e-38;53!UBERON:0000955;2.30e-26;68!UBERON:0001017;8.06e-26;75!UBERON:0001016;5.80e-24;83!UBERON:0002420;1.53e-16;9!UBERON:0007245;1.53e-16;9!UBERON:0010009;1.53e-16;9!UBERON:0010011;1.53e-16;9!UBERON:0000454;1.53e-16;9!UBERON:0000125;1.29e-15;9!UBERON:0002308;1.29e-15;9!UBERON:0000200;5.43e-15;6!UBERON:0000349;2.54e-13;5!UBERON:0004732;6.85e-13;13!UBERON:0001872;7.49e-13;5!UBERON:0001871;1.07e-12;6!UBERON:0002021;3.47e-12;5!UBERON:0009663;4.55e-12;7!UBERON:0007023;3.45e-11;114!UBERON:0004733;5.08e-11;12!UBERON:0002028;5.08e-11;12!UBERON:0000369;7.18e-11;4!UBERON:0002435;7.18e-11;4!UBERON:0000204;7.18e-11;4!UBERON:0000922;1.86e-09;49!UBERON:0011216;2.51e-09;132!UBERON:0002298;6.15e-09;6!UBERON:0002680;6.97e-09;9!UBERON:0001895;6.97e-09;9!UBERON:0005383;1.76e-08;3!UBERON:0005382;1.76e-08;3!UBERON:0001870;2.20e-08;3!UBERON:0000988;3.31e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.09e-76,89;UBERON:0001017,1.87e-72,81;UBERON:0000073,4.10e-66,53;UBERON:0002616,4.10e-66,53;UBERON:0001049,3.58e-65,56;UBERON:0005068,3.58e-65,56;UBERON:0006241,3.58e-65,56;UBERON:0007135,3.58e-65,56;UBERON:0000955,3.94e-57,68;UBERON:0006238,3.94e-57,68;UBERON:0001869,5.34e-57,32;UBERON:0001893,6.99e-57,34;UBERON:0003528,1.73e-56,34;UBERON:0002020,1.73e-56,34;UBERON:0002780,2.78e-56,41;UBERON:0001890,2.78e-56,41;UBERON:0003080,2.78e-56,41;UBERON:0006240,2.78e-56,41;UBERON:0002791,1.12e-52,32;UBERON:0002619,3.18e-48,22;UBERON:0002346,4.26e-47,86;UBERON:0003075,2.61e-45,82;UBERON:0007284,2.61e-45,82;UBERON:0001950,1.77e-43,20;UBERON:0000956,7.24e-42,25;UBERON:0000203,7.24e-42,25;UBERON:0003056,1.36e-39,61;UBERON:0004121,7.01e-37,171;UBERON:0000924,7.01e-37,171;UBERON:0006601,7.01e-37,171;UBERON:0007023,3.56e-33,114;UBERON:0010371,3.91e-33,104;UBERON:0011216,7.66e-27,223;UBERON:0010314,5.40e-25,132;UBERON:0002420,1.46e-16,9;UBERON:0007245,1.46e-16,9;UBERON:0010009,1.46e-16,9;UBERON:0010011,1.46e-16,9;UBERON:0000454,1.46e-16,9;UBERON:0000125,9.51e-16,9;UBERON:0002308,9.51e-16,9;UBERON:0000200,5.57e-15,6;UBERON:0000349,2.28e-13,5;UBERON:0004732,5.68e-13,13;UBERON:0001872,7.41e-13,5;UBERON:0001871,1.18e-12,6;UBERON:0002021,3.35e-12,5;UBERON:0009663,4.29e-12,7;UBERON:0000025,1.08e-11,192;UBERON:0004733,4.47e-11,12;UBERON:0002028,4.47e-11,12;UBERON:0007277,4.47e-11,12;UBERON:0000369,7.02e-11,4;UBERON:0002435,7.02e-11,4;UBERON:0000204,7.02e-11,4;UBERON:0010082,7.02e-11,4;UBERON:0003076,8.81e-11,15;UBERON:0003057,8.81e-11,15;UBERON:0002680,5.59e-09,9;UBERON:0001895,5.59e-09,9;UBERON:0010092,5.59e-09,9;UBERON:0002298,5.89e-09,6;UBERON:0005383,1.76e-08,3;UBERON:0005382,1.76e-08,3;UBERON:0001870,2.04e-08,3;UBERON:0000922,5.61e-08,592;UBERON:0004111,7.50e-08,240;UBERON:0000988,2.73e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.382067028739756,0.0821005894499457,0.393553906568396,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83370705696798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.07447495551653,5.4337205011809,5.11253348625881,2.07322110030741,2.52320850875628,3.6497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,3.90419561572865,3.09315525111078,4.02039036802437,2.55175500661265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95318118213038,8.01815673539923,0,0,0,0,0,0,0,1.23084805461069,0,0,0,0,0,0,0,13.5706584453331,8.72020122721402,9.98068990005971,0,0,0,0,0,0,0,0,2.95162491386597,4.42870692906919,7.83876851065152,6.10326945268333,4.97606669690511,5.6154047601174,9.43357207762082,0,0,0.923403102045565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,1.48260564340311,1.97702302314405,1.56632924258183,1.81983059047828,0.802577647298789,4.91955336023212,0,0,0,0.789168805698781,0,4.28501866282686,0.442306057399416,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.873633341210151,0,0,0,0,0.0969890164884194,0,0.90392296312213,2.74083849293502,0,8.99013302573478,0,0,0,0,0,0,2.05913997434357,0,0,0,0,0,0,0,1.20084057741958,1.64286454670392,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,11.1332156573302,5.85674646279775,1.60753148465019,3.71356478812531,2.07720169014593,0,0,12.6359077848691,0,0,0.891727998294968,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,1.93924434542326,2.6446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31640907980192,4.51497180137264,5.88397374320549,0,1.10929051536852,2.17337410294842,0,0,0,0,0,0,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0,0,0,0,0,4.42426995685538,0,0,0,0,0,0,1.19992437512958,0,0,0,0,0,0,8.69681724864831,10.8903059510649,0,8.08151322620903,0,2.76347396132188,0.371807292777007,0,0,0,0,0,0,9.82707143975831,1.41696576325585,4.78901577171454,5.53814183450038,5.5455773168778,9.19791457774098,7.10492840780145,5.71077681036618,0,0,0,0,0,0,0,3.45967510406583,0,0,0,0,0,9.79294976966722,4.68646859168308,4.54710952302605,10.3367770616068,5.4697480901822,0,0,2.46219742103469,0,0,0.336283722218824,5.46269043812968,3.41493287026946,0,0.230467975111559,0,3.05863798395743,10.6551893171816,0,0,0.706437835654626,11.6265536537841,0,1.82631744101899,0,0,1.00067161847319,0,0,0,0,0,0,0,0,0,0,2.11693525095465,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0.118920090777569,0,1.09940516745429,0,0.0771741581079447,0.218559560503957,0,0,0,0.588925401344836,0.297046400327086,2.113278637917,0,0,0.0644578879735772,0,0,0,0,0,0,0.573358332605805,2.36657343289777,12.8503916460829,5.67255897442491,1.0580536810308,0,0,0,1.26166424835079,0,0.633492505057185,0,1.06886962106224,0,0,0.151557396436479,0,0.829169439458779,0.827463966895162,0,0.23806443146374,0,0,0,0,0,0,0.342233301085281,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,3.30051899293739,4.06896178315738,0,0.402547587182052,0 | |||
|short_description=p3@JPH4 | |||
}} |
Latest revision as of 12:22, 19 September 2015
Short description: | p3@JPH4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_JPH4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -5bp_to_ENST00000543864_5end |
EntrezGene: | JPH4 |
HGNC: | 20156 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.05e-16 | 8 |
neuron | 4.35e-13 | 6 |
neuroblast | 4.35e-13 | 6 |
electrically signaling cell | 4.35e-13 | 6 |
embryonic stem cell | 6.62e-12 | 5 |