FFCP PHASE1:Hg19::chr8:19615538..19615541,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:19615538..19615541,-
|short_description=p12@CSGALNACT1
|description=CAGE_peak_12_at_CSGALNACT1_5end
|association_with_transcript=0bp_to_ENST00000517494_5en...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55790 | |EntrezGene=55790 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24290 | |HGNC=24290 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJB6 | |UniProt=E5RJB6 | ||
|association_with_transcript=0bp_to_ENST00000517494_5end | |||
|cluster_id=chr8:19615538..19615541,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_12_at_CSGALNACT1_5end | |||
|id=chr8:19615538..19615541,- | |||
|ontology_enrichment_celltype=CL:0002150!3.79e-10!3;CL:0000861!3.79e-10!3;CL:0000159!2.92e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002569;6.23e-22;6!CL:0000771;2.57e-08;2!CL:0000349;2.48e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,7.72e-22,6;CL:0000771,2.15e-08,2;CL:0000349,2.65e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.56e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.96e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003422;6.23e-22;6!UBERON:0003104;6.69e-19;7!UBERON:0009142;6.69e-19;7!UBERON:0001282;2.56e-15;1!UBERON:0009842;2.56e-15;1!UBERON:0003704;2.56e-15;1!UBERON:0001171;2.56e-15;1!UBERON:0001172;2.56e-15;1!UBERON:0002394;4.39e-15;4!UBERON:0003928;4.39e-15;4!UBERON:0002331;1.98e-13;10!UBERON:0000478;7.65e-10;24!UBERON:0002294;5.05e-09;7!UBERON:0001173;5.05e-09;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,7.72e-22,6;UBERON:0001282,3.17e-15,1;UBERON:0009842,3.17e-15,1;UBERON:0003704,3.17e-15,1;UBERON:0001171,3.17e-15,1;UBERON:0001172,3.17e-15,1;UBERON:0002331,2.25e-13,10;UBERON:0000358,2.25e-13,10;UBERON:0000307,2.25e-13,10;UBERON:0000091,2.25e-13,10;UBERON:0000087,2.25e-13,10;UBERON:0007010,2.25e-13,10;UBERON:0007806,2.25e-13,10;UBERON:0008780,2.25e-13,10;UBERON:0005728,2.25e-13,10;UBERON:0002394,2.29e-10,6;UBERON:0003928,2.29e-10,6;UBERON:0000478,8.21e-10,24;UBERON:0002294,3.34e-07,9;UBERON:0001173,3.34e-07,9;UBERON:0004912,3.34e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.66944122552934,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,1.20190447125277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0.723033089650446,0,0.217879444092406,0.71181185733329,0,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08524321078289,2.46972101034231,0,0,3.16780749173372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,3.91555844261345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67160823029439,0,0,0,0,0,0.764637207142375,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66866030566487,0,0,0,0,0,0,0,1.15362711958732,0,0,0,0,0,0,0,0,2.86433879480975,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,1.13942055847001,0,0,0.217294743844016,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580537987734511,0.511625219603299,0.410577285266046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0,0,0,0,3.07956308191793,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8861176017936,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,2.22328907854041,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.66944122552934,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,1.20190447125277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0.723033089650446,0,0.217879444092406,0.71181185733329,0,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08524321078289,2.46972101034231,0,0,3.16780749173372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,3.91555844261345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67160823029439,0,0,0,0,0,0.764637207142375,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66866030566487,0,0,0,0,0,0,0,1.15362711958732,0,0,0,0,0,0,0,0,2.86433879480975,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,1.13942055847001,0,0,0.217294743844016,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580537987734511,0.511625219603299,0.410577285266046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0,0,0,0,3.07956308191793,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8861176017936,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,2.22328907854041,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p12@CSGALNACT1 | |||
}} | }} |
Latest revision as of 07:45, 17 September 2015
Short description: | p12@CSGALNACT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CSGALNACT1_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000517494_5end |
EntrezGene: | CSGALNACT1 |
HGNC: | 24290 |
UniProt: | E5RJB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 7.72e-22 | 6 |
eosinophil | 2.15e-08 | 2 |
extraembryonic cell | 2.65e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 7.72e-22 | 6 |
intralobular bile duct | 3.17e-15 | 1 |
acinus | 3.17e-15 | 1 |
intrahepatic bile duct | 3.17e-15 | 1 |
portal lobule | 3.17e-15 | 1 |
hepatic acinus | 3.17e-15 | 1 |
umbilical cord | 2.25e-13 | 10 |
blastocyst | 2.25e-13 | 10 |
blastula | 2.25e-13 | 10 |
bilaminar disc | 2.25e-13 | 10 |
inner cell mass | 2.25e-13 | 10 |
cleaving embryo | 2.25e-13 | 10 |
connecting stalk | 2.25e-13 | 10 |
inner cell mass derived epiblast | 2.25e-13 | 10 |
extraembryonic mesoderm | 2.25e-13 | 10 |
bile duct | 2.29e-10 | 6 |
digestive system duct | 2.29e-10 | 6 |
extraembryonic structure | 8.21e-10 | 24 |
biliary system | 3.34e-07 | 9 |
biliary tree | 3.34e-07 | 9 |
biliary bud | 3.34e-07 | 9 |