FFCP PHASE1:Hg19::chr8:22250306..22250322,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:22250306..22250322,+
|short_description=p18@SLC39A14
|description=CAGE_peak_18_at_SLC39A14_5end
|association_with_transcript=-20bp_to_ENST00000520832_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23516 | |EntrezGene=23516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20858 | |HGNC=20858 | ||
|TSSclassifier=strong | |||
|UniProt=E5RFF5 | |UniProt=E5RFF5 | ||
|association_with_transcript=-20bp_to_ENST00000520832_5end | |||
|cluster_id=chr8:22250306..22250322,+ | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_18_at_SLC39A14_5end | |||
|id=chr8:22250306..22250322,+ | |||
|ontology_enrichment_celltype=CL:0000569!3.06e-09!4;CL:0000011!3.06e-09!4;CL:0000359!1.34e-08!32;CL:0002595!1.23e-07!5;CL:0002494!4.37e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.15e-25;13!CL:0002593;3.89e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.27e-22,15;CL:0002593,4.52e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.98e-21;1!UBERON:0003056;7.50e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!9.06e-13!113;UBERON:0007100!4.01e-12!27;UBERON:0004872!2.67e-11!84;UBERON:0004535!1.94e-10!110;UBERON:0000055!1.36e-09!69;UBERON:0003914!2.00e-08!118;UBERON:0000948!2.24e-08!24;UBERON:0005498!2.24e-08!24;UBERON:0004140!2.24e-08!24;UBERON:0009881!2.24e-08!24;UBERON:0004141!2.24e-08!24;UBERON:0003084!2.24e-08!24;UBERON:0007005!2.24e-08!24;UBERON:0004139!2.24e-08!24;UBERON:0004291!2.24e-08!24;UBERON:0004573!2.67e-08!33;UBERON:0004571!2.67e-08!33;UBERON:0004111!4.33e-08!241;UBERON:0001637!4.69e-08!42;UBERON:0003509!4.69e-08!42;UBERON:0004572!4.69e-08!42;UBERON:0002049!1.12e-07!79;UBERON:0007798!1.12e-07!79;UBERON:0003834!1.23e-07!5;UBERON:0001533!1.23e-07!5;UBERON:0000477!1.78e-07!286;UBERON:0001981!3.18e-07!60;UBERON:0007500!3.18e-07!60;UBERON:0004537!3.18e-07!60;UBERON:0006965!3.18e-07!60;UBERON:0000486!8.47e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;6.98e-21;1!UBERON:0001785;6.98e-21;1!UBERON:0002464;6.98e-21;1!UBERON:0004904;6.98e-21;1!UBERON:0001021;6.98e-21;1!UBERON:0003714;3.89e-11;2!UBERON:0005162;3.89e-11;2!UBERON:0000122;3.89e-11;2!UBERON:0002456;3.89e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,7.72e-21,1;UBERON:0001785,7.72e-21,1;UBERON:0002464,7.72e-21,1;UBERON:0004904,7.72e-21,1;UBERON:0001021,7.72e-21,1;UBERON:0003902,7.72e-21,1;UBERON:0005425,7.72e-21,1;UBERON:0003714,4.09e-11,2;UBERON:0005162,4.09e-11,2;UBERON:0000122,4.09e-11,2;UBERON:0002456,4.52e-11,2 | |||
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| ||
|short_description=p18@SLC39A14 | |||
}} | }} |
Latest revision as of 11:01, 17 September 2015
Short description: | p18@SLC39A14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_SLC39A14_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -20bp_to_ENST00000520832_5end |
EntrezGene: | SLC39A14 |
HGNC: | 20858 |
UniProt: | E5RFF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.27e-22 | 15 |
smooth muscle cell of the internal thoracic artery | 4.52e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 7.72e-21 | 1 |
cranial nerve | 7.72e-21 | 1 |
nerve trunk | 7.72e-21 | 1 |
nerve connecting eye with brain | 7.72e-21 | 1 |
nerve | 7.72e-21 | 1 |
retinal neural layer | 7.72e-21 | 1 |
presumptive neural retina | 7.72e-21 | 1 |
neural tissue | 4.09e-11 | 2 |
multi cell component structure | 4.09e-11 | 2 |
neuron projection bundle | 4.09e-11 | 2 |
internal thoracic artery | 4.52e-11 | 2 |