FFCP PHASE1:Hg19::chr16:80068152..80068165,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:80068152..80068165,- | |||
|coexpression_cluster_id=C406 | |||
|description=CAGE_peak_at_chr16:80068152..80068165,- | |||
|id=chr16:80068152..80068165,- | |||
|ontology_enrichment_celltype=CL:0002166!4.33e-33!3;CL:0002621!3.32e-32!3;CL:1000497!1.22e-27!18;CL:0002518!1.22e-27!18;CL:0000244!1.78e-24!4;CL:0000731!1.78e-24!4;CL:1000449!4.33e-23!16;CL:1000507!1.34e-21!12;CL:1000494!1.34e-21!12;CL:0002681!5.64e-20!13;CL:0002584!5.64e-20!13;CL:0000239!7.53e-15!3;CL:1000615!7.53e-15!3;CL:0002306!7.53e-15!3;CL:0000066!5.34e-11!254;CL:0002159!4.42e-08!13;CL:1000612!5.34e-07!7;CL:1000746!5.34e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002166;7.77e-118;3!CL:0002159;3.76e-26;14!CL:0002621;1.40e-14;3!CL:0000244;3.42e-11;4!CL:0000731;3.42e-11;4!CL:0002077;1.74e-09;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,5.20e-118,3;CL:0002159,3.45e-26,14;CL:0002621,1.40e-14,3;CL:0002077,2.57e-11,34;CL:0000244,3.79e-11,4;CL:0000731,3.79e-11,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!3.32e-32!3;UBERON:0006554!4.49e-27!44;UBERON:0001008!1.93e-26!45;UBERON:0001708!5.33e-25!4;UBERON:0001704!5.33e-25!4;UBERON:0004211!4.33e-23!16;UBERON:0001285!4.33e-23!16;UBERON:0007684!4.33e-23!16;UBERON:0003220!4.33e-23!16;UBERON:0004208!4.33e-23!16;UBERON:0006555!1.03e-21!17;UBERON:0005103!1.03e-21!17;UBERON:0000083!1.03e-21!17;UBERON:0009201!1.03e-21!17;UBERON:0004819!1.03e-21!17;UBERON:0006553!1.03e-21!17;UBERON:0003074!1.03e-21!17;UBERON:0003060!1.03e-21!17;UBERON:0009773!1.34e-21!12;UBERON:0001231!1.34e-21!12;UBERON:0004810!1.34e-21!12;UBERON:0000080!1.71e-20!18;UBERON:0002120!1.71e-20!18;UBERON:0004875!1.71e-20!18;UBERON:0005721!1.71e-20!18;UBERON:0005754!1.71e-20!18;UBERON:0007297!1.71e-20!18;UBERON:0001225!5.64e-20!13;UBERON:0008987!5.64e-20!13;UBERON:0000365!1.02e-19!5;UBERON:0004876!2.06e-18!20;UBERON:0002113!3.06e-18!27;UBERON:0003918!3.06e-18!27;UBERON:0005095!3.06e-18!27;UBERON:0007687!3.06e-18!27;UBERON:0003887!1.60e-17!21;UBERON:0002090!6.94e-17!6;UBERON:0005910!1.54e-16!6;UBERON:0001851!3.16e-16!16;UBERON:0000489!2.69e-15!32;UBERON:0000353!2.86e-15!17;UBERON:0006853!7.53e-15!3;UBERON:0007685!7.53e-15!3;UBERON:0004134!7.53e-15!3;UBERON:0000058!4.36e-14!26;UBERON:0003064!4.04e-13!37;UBERON:0001828!1.74e-12!8;UBERON:0003129!1.84e-09!11;UBERON:0005172!1.26e-08!55;UBERON:0005173!1.26e-08!55;UBERON:0000075!4.42e-08!13;UBERON:0005944!4.42e-08!13;UBERON:0004288!4.42e-08!13;UBERON:0003089!4.42e-08!13;UBERON:0002417!1.04e-07!61;UBERON:0000916!1.04e-07!61;UBERON:0000074!5.34e-07!7;UBERON:0001229!5.34e-07!7;UBERON:0001230!5.34e-07!7;UBERON:0005749!5.34e-07!7;UBERON:0004199!5.34e-07!7;UBERON:0004209!5.34e-07!7;UBERON:0004198!5.34e-07!7;UBERON:0003103!9.79e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;1.04e-88;4!UBERON:0008895;1.04e-88;4!UBERON:0011159;3.21e-71;5!UBERON:0011137;5.34e-33;11!UBERON:0010323;5.34e-33;11!UBERON:0000075;5.23e-23;16!UBERON:0001949;1.40e-14;3!UBERON:0004765;1.62e-14;26!UBERON:0000486;3.14e-14;12!UBERON:0001434;8.92e-11;36!UBERON:0000365;3.22e-09;5!UBERON:0005910;6.78e-08;6!UBERON:0003929;5.38e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,7.73e-89,4;UBERON:0008895,7.73e-89,4;UBERON:0011159,2.52e-71,5;UBERON:0010188,1.22e-59,6;UBERON:0002539,1.22e-59,6;UBERON:0008816,1.22e-59,6;UBERON:0010323,4.79e-33,11;UBERON:0011137,3.45e-26,14;UBERON:0000075,4.85e-23,16;UBERON:0008814,1.37e-20,18;UBERON:0001949,1.40e-14,3;UBERON:0000033,5.06e-12,56;UBERON:0000153,6.33e-11,62;UBERON:0007811,6.33e-11,62;UBERON:0000365,3.49e-09,5;UBERON:0005910,7.25e-08,6;UBERON:0003102,4.54e-07,99 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,4.90943017063502,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,40.3157107677263,1.98485136139341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0.527758144464379,0,0,0.647747748306418,0,0.812839312631559,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,1.68471475667626,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:80068152..80068165,- | |||
}} |
Latest revision as of 12:36, 25 July 2015
Short description: | p@chr16:80068152..80068165, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:80068152..80068165, - |
Coexpression cluster: | C406_Mallassezderived_Mesothelial_mesenchymal_chorionic_Gingival_Placental_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 5.20e-118 | 3 |
general ecto-epithelial cell | 3.45e-26 | 14 |
gingival epithelial cell | 1.40e-14 | 3 |
ecto-epithelial cell | 2.57e-11 | 34 |
transitional epithelial cell | 3.79e-11 | 4 |
urothelial cell | 3.79e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 7.73e-89 | 4 |
splanchnocranium | 7.73e-89 | 4 |
primary subdivision of cranial skeletal system | 2.52e-71 | 5 |
protuberance | 1.22e-59 | 6 |
pharyngeal arch | 1.22e-59 | 6 |
embryonic head | 1.22e-59 | 6 |
cranial skeletal system | 4.79e-33 | 11 |
axial skeletal system | 3.45e-26 | 14 |
subdivision of skeletal system | 4.85e-23 | 16 |
pharyngeal arch system | 1.37e-20 | 18 |
gingival epithelium | 1.40e-14 | 3 |
head | 5.06e-12 | 56 |
anterior region of body | 6.33e-11 | 62 |
craniocervical region | 6.33e-11 | 62 |
urothelium | 3.49e-09 | 5 |
transitional epithelium | 7.25e-08 | 6 |
surface structure | 4.54e-07 | 99 |