FFCP PHASE1:Hg19::chr17:42984454..42984463,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4235 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=241bp_to_BC012228_5end | |||
|cluster_id=chr17:42984454..42984463,- | |||
|coexpression_cluster_id=C1620 | |||
|description=CAGE_peak_37_at_GFAP_5end | |||
|id=chr17:42984454..42984463,- | |||
|ontology_enrichment_celltype=CL:0002605!5.45e-13!3;CL:0000128!1.20e-09!7;CL:0000126!1.20e-09!7;CL:0000127!1.20e-09!7;CL:0002453!1.20e-09!7 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.28e-25;3!CL:0000128;3.11e-19;7!CL:0000126;3.11e-19;7!CL:0000127;3.11e-19;7!CL:0000243;4.96e-08;15!CL:0000125;4.96e-08;15!CL:0000095;3.37e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.09e-25,3;CL:0000128,3.77e-19,7;CL:0000126,3.77e-19,7;CL:0000127,3.77e-19,7;CL:0002453,3.77e-19,7;CL:0000243,5.35e-08,15;CL:0000125,5.35e-08,15;CL:0000030,5.35e-08,15;CL:0000339,5.35e-08,15;CL:0000095,3.61e-07,17;CL:0000123,3.61e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.44e-26;3!UBERON:0003057;3.44e-26;3!UBERON:0006222;5.53e-10;1!CL:0000339;4.96e-08;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p37@GFAP | |||
}} |
Latest revision as of 23:22, 24 September 2015
Short description: | p37@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_37_at_GFAP_5end |
Coexpression cluster: | C1620_spinal_occipital_optic_diencephalon_substantia_brain_corpus |
Association with transcript: | 241bp_to_BC012228_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.09e-25 | 3 |
oligodendrocyte | 3.77e-19 | 7 |
macroglial cell | 3.77e-19 | 7 |
astrocyte | 3.77e-19 | 7 |
oligodendrocyte precursor cell | 3.77e-19 | 7 |
glial cell (sensu Vertebrata) | 5.35e-08 | 15 |
glial cell | 5.35e-08 | 15 |
glioblast | 5.35e-08 | 15 |
glioblast (sensu Vertebrata) | 5.35e-08 | 15 |
neuron associated cell | 3.61e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 3.61e-07 | 17 |