FFCP PHASE1:Hg19::chr18:56246814..56246824,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115701 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |||
|TSSclassifier=strong | |||
|UniProt=Q86TB3 | |||
|association_with_transcript=-247bp_to_AL832018_5end | |||
|cluster_id=chr18:56246814..56246824,- | |||
|coexpression_cluster_id=C2467 | |||
|description=CAGE_peak_26_at_ALPK2_5end | |||
|id=chr18:56246814..56246824,- | |||
|ontology_enrichment_celltype=CL:0002620!5.61e-14!23;CL:0000057!1.78e-13!75;CL:0000055!2.27e-11!180;CL:0000499!3.75e-09!27;CL:0000548!4.83e-07!679;CL:0000004!4.83e-07!679;CL:0000255!4.83e-07!679;CL:0000012!7.22e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.98e-19;3!CL:0000243;8.89e-13;15!CL:0000125;8.89e-13;15!CL:0000095;2.24e-11;17!CL:0000197;5.52e-10;6!CL:0000098;5.52e-10;6!CL:0002569;5.52e-10;6!CL:0002167;5.52e-10;6!CL:0000128;1.26e-08;7!CL:0000126;1.26e-08;7!CL:0000127;1.26e-08;7!CL:0002319;7.62e-08;25!CL:0002568;1.30e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,6.20e-19,3;CL:0000243,7.73e-13,15;CL:0000125,7.73e-13,15;CL:0000030,7.73e-13,15;CL:0000339,7.73e-13,15;CL:0000095,1.97e-11,17;CL:0000123,1.97e-11,17;CL:0000197,2.80e-10,6;CL:0000098,2.80e-10,6;CL:0002167,2.80e-10,6;CL:0002569,8.54e-10,6;CL:0000133,1.06e-08,59;CL:0000128,2.03e-08,7;CL:0000126,2.03e-08,7;CL:0000127,2.03e-08,7;CL:0002453,2.03e-08,7;CL:0002319,6.99e-08,25;CL:0002568,1.80e-07,1;CL:0000221,7.14e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000339;8.89e-13;15!UBERON:0000358;4.55e-08;1!UBERON:0003099;1.30e-07;1!UBERON:0003852;1.30e-07;1!CL:0000133;3.16e-07;59 | |||
|ontology_enrichment_disease=DOID:17!8.77e-08!5;DOID:450!8.77e-08!5;DOID:66!8.77e-08!5;DOID:423!8.77e-08!5;DOID:0080000!8.77e-08!5;DOID:11722!8.77e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:1192;1.28e-09;3!DOID:3093;1.09e-08;11!DOID:3369;4.55e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,1.13e-09,3;DOID:3093,6.46e-09,11;DOID:3369,4.28e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!8.63e-13!9;UBERON:0002097!3.24e-08!40;UBERON:0002199!8.91e-07!45;UBERON:0002416!8.91e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003104;1.48e-14;7!UBERON:0009142;1.48e-14;7!UBERON:0002331;2.09e-10;10!UBERON:0003422;5.52e-10;6!UBERON:0005705;1.30e-07;1!UBERON:0008193;1.30e-07;1!UBERON:0010912;1.30e-07;1!UBERON:0002514;1.30e-07;1!UBERON:0003457;1.30e-07;1!UBERON:0008907;1.30e-07;1!UBERON:0008001;1.30e-07;1!UBERON:0007213;1.30e-07;1!UBERON:0009891;1.30e-07;1!UBERON:0007914;1.30e-07;1!UBERON:0007375;1.30e-07;1!UBERON:0003323;1.30e-07;1!UBERON:0010258;1.30e-07;1!UBERON:0005253;1.30e-07;1!UBERON:0007842;1.30e-07;1!UBERON:0002397;1.30e-07;1!UBERON:0003113;1.30e-07;1!UBERON:0003277;1.30e-07;1!UBERON:0001709;1.30e-07;1!UBERON:0002244;1.30e-07;1!UBERON:0005620;1.30e-07;1!UBERON:0010364;1.30e-07;1!UBERON:0004288;1.30e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.04e-10,10;UBERON:0000358,3.04e-10,10;UBERON:0000307,3.04e-10,10;UBERON:0000091,3.04e-10,10;UBERON:0000087,3.04e-10,10;UBERON:0007010,3.04e-10,10;UBERON:0007806,3.04e-10,10;UBERON:0008780,3.04e-10,10;UBERON:0005728,3.04e-10,10;UBERON:0003422,8.54e-10,6;UBERON:0005705,8.84e-08,1;UBERON:0008193,8.84e-08,1;UBERON:0010912,8.84e-08,1;UBERON:0002514,8.84e-08,1;UBERON:0003457,8.84e-08,1;UBERON:0008907,8.84e-08,1;UBERON:0008001,8.84e-08,1;UBERON:0007213,8.84e-08,1;UBERON:0009891,8.84e-08,1;UBERON:0007914,8.84e-08,1;UBERON:0009292,8.84e-08,1;UBERON:0003099,8.84e-08,1;UBERON:0007375,8.84e-08,1;UBERON:0003323,8.84e-08,1;UBERON:0010258,8.84e-08,1;UBERON:0007842,8.84e-08,1;UBERON:0009494,8.84e-08,1;UBERON:0010042,8.84e-08,1;UBERON:0010045,8.84e-08,1;UBERON:0010259,8.84e-08,1;UBERON:0010359,8.84e-08,1;UBERON:0009526,8.84e-08,1;UBERON:0002397,8.84e-08,1;UBERON:0003113,8.84e-08,1;UBERON:0003277,8.84e-08,1;UBERON:0001709,8.84e-08,1;UBERON:0004066,8.84e-08,1;UBERON:0002244,8.84e-08,1;UBERON:0005620,8.84e-08,1;UBERON:0004362,8.84e-08,1;UBERON:0010364,8.84e-08,1;UBERON:0010046,8.84e-08,1;UBERON:0005868,8.84e-08,1;UBERON:0007238,8.84e-08,1;UBERON:0004288,8.84e-08,1;UBERON:0004068,8.84e-08,1;UBERON:0010334,8.84e-08,1;UBERON:0003852,8.84e-08,1;UBERON:0010253,8.84e-08,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.492484232307152,0.408001382488506,0,1.14494394852423,1.09499540058307,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,1.50401373190767,0.434539556882471,0,0.486634870302636,0.0945348171640679,0,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,0.12663051166458,1.19168262731897,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0.438977620880838,0.612975591598039,0.300476117813194,0.113432183160021,1.79389635688862,0.85422955527427,0.423863802319124,0.300091096084402,0.412210116953756,1.54584324027377,1.11670113798954,0.337552664482532,0.68205903612839,0.504867548488229,0.920498986422993,0.969876340912871,1.06502877754984,0.604512589365842,0.339121184620975,0,0,0,0,0,0,0,0,0,0,2.57296375277154,0,0,0,0.709840800239063,0.505754070234305,0.964044119533928,1.21323370005633,0.217879444092406,0.71181185733329,0.674156540800822,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.87192013766656,0.4400297149257,1.16344544182,0,0,0.531876233169741,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,1.19812427745791,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45579603071565,0.713715955188647,1.26161932027148,1.99140405487612,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,1.07423381301644,0,0.256278298511402,1.02341449813341,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.459257792658427,0.728364672026868,0.524497659837696,0,0,0,0,0.105551628892876,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0.372158369359667,1.2655176988749,0.190630193923825,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0.405820753925408,0,0,0,0,0,0,0.844430541190656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42068073403207,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32681539055697,0,0,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,1.63085047288337,1.77824838730966,0.407992870545287,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0,0,0.251567901752575,0.889811221596536,0,0,0,0,0.318593534327405,0,0,0,0.265841714557995,0.521745061811734,0,0,0.813741466409323,0,0,0,0,0.800055529326307,0.686791410365586,1.34699795506368,0,0,0.428883182749851,0,0.453411851024545,0.694567422971502,0,0,0,0.438568099157414,0,0.192914038270915,0.168942440653073,0.256241518587947,1.38172136692479,0,0,0.389720617678777,1.32864840313363,0,0,0,0,0,0,0,1.13503190713367,0,0,0,0,0,0,0.218419276384028,0,0,0,0,1.27201740261367,0,0,1.41070377476274,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0.813689977576877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0.462175628631418,0.865253124247578,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p26@ALPK2 | |||
}} |
Latest revision as of 00:07, 20 September 2015
Short description: | p26@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_ALPK2_5end |
Coexpression cluster: | C2467_Olfactory_Fibroblast_Hair_alveolar_glioblastoma_Preadipocyte_Ewing |
Association with transcript: | -247bp_to_AL832018_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | Q86TB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 6.20e-19 | 3 |
glial cell (sensu Vertebrata) | 7.73e-13 | 15 |
glial cell | 7.73e-13 | 15 |
glioblast | 7.73e-13 | 15 |
glioblast (sensu Vertebrata) | 7.73e-13 | 15 |
neuron associated cell | 1.97e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 1.97e-11 | 17 |
receptor cell | 2.80e-10 | 6 |
sensory epithelial cell | 2.80e-10 | 6 |
olfactory epithelial cell | 2.80e-10 | 6 |
mesenchymal stem cell of umbilical cord | 8.54e-10 | 6 |
neurectodermal cell | 1.06e-08 | 59 |
oligodendrocyte | 2.03e-08 | 7 |
macroglial cell | 2.03e-08 | 7 |
astrocyte | 2.03e-08 | 7 |
oligodendrocyte precursor cell | 2.03e-08 | 7 |
neural cell | 6.99e-08 | 25 |
mesenchymal stem cell of Wharton's jelly | 1.80e-07 | 1 |
ectodermal cell | 7.14e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 1.13e-09 | 3 |
nervous system cancer | 6.46e-09 | 11 |
peripheral primitive neuroectodermal tumor | 4.28e-08 | 1 |