FFCP PHASE1:Hg19::chr19:10226741..10226769,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:10226741..10226769,- | |||
|coexpression_cluster_id=C1184 | |||
|description=CAGE_peak_at_chr19:10226741..10226769,- | |||
|id=chr19:10226741..10226769,- | |||
|ontology_enrichment_celltype=CL:0000625!6.73e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000623;2.22e-15;3!CL:0000767;3.01e-15;3!CL:0000226;4.59e-15;3!CL:0000842;4.59e-15;3!CL:0000625;1.72e-14;11!CL:0000791;1.31e-08;18!CL:0000789;1.31e-08;18!CL:0002419;1.31e-08;18!CL:0002393;4.37e-07;6!CL:0002397;4.37e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.23e-15,3;CL:0000825,2.23e-15,3;CL:0000767,3.10e-15,3;CL:0000226,3.74e-15,3;CL:0000842,3.74e-15,3;CL:0000625,1.33e-14,11;CL:0000738,7.66e-09,136;CL:0000791,1.12e-08,18;CL:0000789,1.12e-08,18;CL:0002420,1.12e-08,18;CL:0002419,1.12e-08,18;CL:0000790,1.12e-08,18;CL:0002087,1.41e-07,115;CL:0000037,3.60e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;1.31e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.63e-08!15;UBERON:0000179!3.63e-08!15;UBERON:0000463!3.63e-08!15;UBERON:0002193!8.84e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.65e-35;15!UBERON:0000179;4.65e-35;15!UBERON:0000463;4.65e-35;15!UBERON:0002390;4.00e-20;32!UBERON:0002193;3.49e-11;42!UBERON:0002106;9.61e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.07e-35,15;UBERON:0000179,4.07e-35,15;UBERON:0000463,4.07e-35,15;UBERON:0002390,1.34e-10,98;UBERON:0003061,1.34e-10,98;UBERON:0002193,2.90e-09,108;UBERON:0002106,6.55e-07,3;UBERON:0004854,6.55e-07,3;UBERON:0009034,6.55e-07,3;UBERON:0002095,6.55e-07,3;UBERON:0004782,6.55e-07,3;UBERON:0003281,6.55e-07,3;UBERON:0009664,6.55e-07,3;UBERON:0002296,6.55e-07,3;UBERON:0005602,6.55e-07,3;UBERON:0001179,6.55e-07,3;UBERON:0006293,6.55e-07,3 | |||
|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0,0,0,0.783556884599516,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0.376627918784408,0,0,0,5.90046415273356,3.45446458287491,5.10893206943051,0,1.204823675113,0,0.154934401160603,0,0,1.10799081706375,1.00272223735071,1.73608696572681,0,0,0.257575567634187,0.145398238779565,0,0,0,0.411167888021826,0,0,0.256160706529101,0,1.03423704220986,0.645484683583826,0,0.752969358170419,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,0,0.329851300186716,0.797854630486527,0.426224750532694,0.870627715885752,0,0,0.502497330513487,0,0.65156653411535,1.81619850790011,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0.285012743741249,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,1.68152568894461,0.263384084775077,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0.589211814949674,0.221533894583621,0,0.128091319725675,0.130059347559878,0.328875809207352,0.276350017785848,0.289803085735052,0.296573126324121,0,0,0,0.766440987203842,0,0.253019692019503,2.22995790026868,2.60433381542567,2.85135613334512,0.903450714466637,1.27986611154418,2.49861453104692,0.236777252044017,1.64225599384209,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0.370784442784429,0,0,0.132957960518865,0.476981248610684,0,0,0.198762407366705,0,0,0,0,0,0.417989933073621,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0.587172493218824,0.161872944368132,0,0.204154171254893,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0.309157587715317,0.257640540045629,0,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0,0,0.252320850875628,0.36497735907583,0,0,1.38134921352481,0.464367928031979,0.721879481669586,0,0.505754070234305,0,0,0,0,0.269662616320329,0.196221465125346,0,0.738155454624648,1.40241773803446,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0.109750285408626,1.1240175325762,0,0,0,0,1.44331342025273,0,0,0,0,0.380508304469197,0,0,0,0,0.148631162288728,0,0,0,0,0.290633938513962,0.383382679165211,0,0.088048434013226,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,9.45747648969251,4.09692392233083,7.82892521306465,0,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0.415941723061614,0.178428988797162,0,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0,0,0,2.89475236572042,5.39285502046542,3.62873696531711,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.355123450626254,0,0,0.116210378459959,0,0,0.0920809889358963,0.114814448164607,0,0.393373244878272,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0.307007349452259,0.137836572484531,0.214840489736547,0,0.170453254832202,0,0,0.192190067365106,0,0.2023155617111,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0,0,0,0.202182481573316,0,0,0,0,1.05650146756755,0.136499911407986,0.424216295861138,0,1.10273068709225,0,0,1.15755106853338,0,0.202910376962704,0.30982349809975,0,0,0,0,0.709522128141196,0.211107635297664,0,0,0,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0,0,0,0,1.01489521846434,2.29391162142713,2.27858874869665,1.42939065274673,2.05681136543097,0.648473311192717,1.62009431171434,1.58625035258854,0.106824071127473,0,0,0,0,0.0711418433484141,0.159426272728822,0.59873811429845,0,0.211673582723883,0,0,0,0.156679895773023,0,0.338583555603207,0.1605880751037,0,0,0,0,0,0,0,0.278406173895242,1.23087398947712,0.811367035427949,0,0,0,0.439524537815682,0.121360521749513,0.222886768554957,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,11.974154617347,0,0,0,0,0.260427761085233,0,0,0,0,0,0.344743373241465,0.291604613383254,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0,0.23056390438806,0.179515288819544,0.217294743844016,0.638002319463839,0.0915975934018623,0,0,0,0.332423363800313,0.225595660617181,0,0,0,0,0.632994193584081,0.163232808159148,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0,0,0.234264445725339,0.182454789215666,0.19566461893209,0,0,0,0,0.063186579628488,0.150323419414493,0.207376382794494,0,0,0,1.19472429772959,0,0.277349346026277,0.173559738335131,0,0,0,0,0.0967563312890851,0,0,0,0,0,0.411125773940253,0.397429223405979,0,0,0,0.213452994739353,0.19980960958213,0.288180834308212,0.114536596165916,0,0.14405479798815,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0.164831716762333,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0.335434687599266,0.236417121897595,0.052454588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| |||
|short_description=p@chr19:10226741..10226769,- | |||
}} |
Latest revision as of 02:45, 26 July 2015
Short description: | p@chr19:10226741..10226769, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:10226741..10226769, - |
Coexpression cluster: | C1184_Natural_Basophils_blood_NK_Peripheral_Whole_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.23e-15 | 3 |
pro-NK cell | 2.23e-15 | 3 |
basophil | 3.10e-15 | 3 |
single nucleate cell | 3.74e-15 | 3 |
mononuclear cell | 3.74e-15 | 3 |
CD8-positive, alpha-beta T cell | 1.33e-14 | 11 |
leukocyte | 7.66e-09 | 136 |
mature alpha-beta T cell | 1.12e-08 | 18 |
alpha-beta T cell | 1.12e-08 | 18 |
immature T cell | 1.12e-08 | 18 |
mature T cell | 1.12e-08 | 18 |
immature alpha-beta T cell | 1.12e-08 | 18 |
nongranular leukocyte | 1.41e-07 | 115 |
hematopoietic stem cell | 3.60e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
blood | 4.07e-35 | 15 |
haemolymphatic fluid | 4.07e-35 | 15 |
organism substance | 4.07e-35 | 15 |
hematopoietic system | 1.34e-10 | 98 |
blood island | 1.34e-10 | 98 |
hemolymphoid system | 2.90e-09 | 108 |
spleen | 6.55e-07 | 3 |
gastrointestinal system mesentery | 6.55e-07 | 3 |
stomach region | 6.55e-07 | 3 |
mesentery | 6.55e-07 | 3 |
gastrointestinal system serosa | 6.55e-07 | 3 |
mesentery of stomach | 6.55e-07 | 3 |
gut mesentery | 6.55e-07 | 3 |
dorsal mesentery | 6.55e-07 | 3 |
dorsal mesogastrium | 6.55e-07 | 3 |
peritoneal cavity | 6.55e-07 | 3 |
spleen primordium | 6.55e-07 | 3 |