FFCP PHASE1:Hg19::chr2:102686934..102686945,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3554 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5993 | |||
|TSSclassifier=strong | |||
|UniProt=B8ZZW4,B8ZZ73 | |||
|association_with_transcript=98bp_to_ENST00000409929,ENST00000424272,uc010fix.2_5end | |||
|cluster_id=chr2:102686934..102686945,+ | |||
|description=CAGE_peak_33_at_IL1R1_5end | |||
|id=chr2:102686934..102686945,+ | |||
|ontology_enrichment_celltype=CL:0000453!3.80e-13!5;CL:0000990!4.77e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000453;7.93e-40;5!CL:0002591;3.67e-23;1!CL:0000990;1.63e-22;8!CL:0000451;1.45e-18;10!CL:0001014;2.74e-12;2!CL:0001016;2.74e-12;2!CL:0000775;8.96e-09;3!CL:1000306;6.87e-07;4!CL:0002547;6.87e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,4.35e-40,5;CL:0002591,4.10e-23,1;CL:0000990,1.17e-22,8;CL:0000451,1.10e-18,10;CL:0001014,2.32e-12,2;CL:0001016,2.32e-12,2;CL:0000775,8.31e-09,3;CL:1000306,7.27e-07,4;CL:0002547,7.27e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;3.67e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,6.40e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0006947!2.75e-08!3;UBERON:0004054!2.75e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;1.33e-23;1!UBERON:0005352;1.33e-23;1!UBERON:0000078;2.74e-12;2!UBERON:0002012;2.74e-12;2!UBERON:0008886;2.74e-12;2!UBERON:0006947;8.96e-09;3!UBERON:0004054;8.96e-09;3!UBERON:0005904;6.87e-07;4!UBERON:0004797;6.87e-07;4!UBERON:0000415;6.87e-07;4!UBERON:0007240;6.87e-07;4!UBERON:0005742;6.87e-07;4!UBERON:0005734;6.87e-07;4!UBERON:0004664;6.87e-07;4!UBERON:0004663;6.87e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,1.34e-23,1;UBERON:0005352,1.34e-23,1;UBERON:0000078,2.90e-12,2;UBERON:0007497,2.90e-12,2;UBERON:0003643,2.90e-12,2;UBERON:0003504,2.90e-12,2;UBERON:0003469,2.90e-12,2;UBERON:0003496,2.90e-12,2;UBERON:0002012,2.90e-12,2;UBERON:0008886,2.90e-12,2;UBERON:0007303,2.90e-12,2;UBERON:0002061,2.90e-12,2;UBERON:0005432,2.90e-12,2;UBERON:0004363,2.90e-12,2;UBERON:0006947,8.96e-09,3;UBERON:0004054,8.96e-09,3;UBERON:0004145,1.30e-08,3;UBERON:0005904,6.87e-07,4;UBERON:0000415,7.27e-07,4;UBERON:0007240,7.27e-07,4;UBERON:0005742,7.27e-07,4;UBERON:0005734,7.27e-07,4;UBERON:0004664,7.27e-07,4;UBERON:0004663,7.27e-07,4 | |||
|phase1_expression=0,0.428201047781966,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0.50133791063589,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,2.0078563452417,0,1.12135520028461,0,0,0,0.404132016209064,0.980771418680752,0,0,0,0,0,0,0,0,0,0.61246251376468,0,0,0,0,0,0,0,0,0,0,0,0,0.567160915800105,0,0,0.423863802319124,0,0,0,0,0,0.194874010322397,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0.542621605391443,0,0,0.355391948742546,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.460511024178389,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0.532306030317022,0,0,0,0,0,0.38126038784765,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,2.36750641709634,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0.449947783103001,1.5476039091159,0,0,0,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,0,0,0.13223260174269,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0,0.337884881306145,0,0,0,0,1.55888247071511,0.930053882193542,1.4720885483026,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02892805662451,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p33@IL1R1 | |||
}} |
Latest revision as of 01:19, 16 September 2015
Short description: | p33@IL1R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_IL1R1_5end |
Coexpression cluster: | NA |
Association with transcript: | 98bp_to_ENST00000409929, ENST00000424272, uc010fix.2_5end |
EntrezGene: | IL1R1 |
HGNC: | 5993 |
UniProt: | B8ZZW4B8ZZ73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 4.35e-40 | 5 |
smooth muscle cell of the pulmonary artery | 4.10e-23 | 1 |
conventional dendritic cell | 1.17e-22 | 8 |
dendritic cell | 1.10e-18 | 10 |
CD1a-positive Langerhans cell | 2.32e-12 | 2 |
immature CD1a-positive Langerhans cell | 2.32e-12 | 2 |
neutrophil | 8.31e-09 | 3 |
fibroblast of tunica adventitia of artery | 7.27e-07 | 4 |
fibroblast of the aortic adventitia | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 1.34e-23 | 1 |
spermatic cord | 1.34e-23 | 1 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.90e-12 | 2 |
developing epithelial placode | 2.90e-12 | 2 |
respiratory system arterial blood vessel | 2.90e-12 | 2 |
respiratory system blood vessel | 2.90e-12 | 2 |
respiratory system artery | 2.90e-12 | 2 |
head blood vessel | 2.90e-12 | 2 |
pulmonary artery | 2.90e-12 | 2 |
pulmonary vascular system | 2.90e-12 | 2 |
pharyngeal vasculature | 2.90e-12 | 2 |
truncus arteriosus | 2.90e-12 | 2 |
aortic sac | 2.90e-12 | 2 |
pharyngeal arch artery | 2.90e-12 | 2 |
male genital duct | 8.96e-09 | 3 |
internal male genitalia | 8.96e-09 | 3 |
outflow tract | 1.30e-08 | 3 |
duct of male reproductive system | 6.87e-07 | 4 |
artery wall | 7.27e-07 | 4 |
tunica adventitia of artery | 7.27e-07 | 4 |
adventitia | 7.27e-07 | 4 |
tunica adventitia of blood vessel | 7.27e-07 | 4 |
aorta tunica adventitia | 7.27e-07 | 4 |
aorta wall | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 6.40e-23 | 1 |