FFCP PHASE1:Hg19::chr9:131902407..131902416,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:131902407..131902416,+
|short_description=p19@PPP2R4
|description=CAGE_peak_19_at_PPP2R4_5end
|association_with_transcript=10bp_to_ENST00000435305_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5524 | |EntrezGene=5524 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9308 | |HGNC=9308 | ||
|TSSclassifier=strong | |||
|UniProt=B4DDQ6 | |UniProt=B4DDQ6 | ||
|association_with_transcript=10bp_to_ENST00000435305_5end | |||
|cluster_id=chr9:131902407..131902416,+ | |||
|description=CAGE_peak_19_at_PPP2R4_5end | |||
|id=chr9:131902407..131902416,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.64e-10;1!UBERON:0008947;2.65e-10;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;4.85e-10;4!DOID:1612;4.85e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.86e-10,4;DOID:1612,4.86e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.17e-10!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.61e-34;9!UBERON:0001557;4.61e-34;9!UBERON:0006947;4.33e-13;3!UBERON:0004054;4.33e-13;3!UBERON:0000998;1.64e-10;1!UBERON:0006868;1.64e-10;1!UBERON:0001000;2.16e-10;1!UBERON:0005352;2.16e-10;1!UBERON:0005904;4.85e-10;4!UBERON:0000996;6.05e-10;1!UBERON:0000058;1.38e-08;10!UBERON:0003135;7.58e-08;11!UBERON:0000072;1.54e-07;37!UBERON:0000065;5.25e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.38e-34,9;UBERON:0001557,4.38e-16,19;UBERON:0006947,4.34e-13,3;UBERON:0004054,4.34e-13,3;UBERON:0000998,1.65e-10,1;UBERON:0006868,1.65e-10,1;UBERON:0001000,2.16e-10,1;UBERON:0005352,2.16e-10,1;UBERON:0005904,4.86e-10,4;UBERON:0000996,5.30e-10,1;UBERON:0008947,8.15e-08,38;UBERON:0003258,8.15e-08,38;UBERON:0003135,8.83e-08,11 | |||
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| ||
|short_description=p19@PPP2R4 | |||
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Latest revision as of 22:08, 15 September 2015
Short description: | p19@PPP2R4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_PPP2R4_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENST00000435305_5end |
EntrezGene: | PPP2R4 |
HGNC: | 9308 |
UniProt: | B4DDQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 2.38e-34 | 9 |
upper respiratory tract | 4.38e-16 | 19 |
male genital duct | 4.34e-13 | 3 |
internal male genitalia | 4.34e-13 | 3 |
seminal vesicle | 1.65e-10 | 1 |
seminal fluid secreting gland | 1.65e-10 | 1 |
vas deferens | 2.16e-10 | 1 |
spermatic cord | 2.16e-10 | 1 |
duct of male reproductive system | 4.86e-10 | 4 |
vagina | 5.30e-10 | 1 |
respiratory primordium | 8.15e-08 | 38 |
endoderm of foregut | 8.15e-08 | 38 |
male reproductive organ | 8.83e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.86e-10 | 4 |
breast cancer | 4.86e-10 | 4 |