FFCP PHASE1:Mm9::chr10:127325700..127325718,-: Difference between revisions
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{{FFCP|EntrezGene=54150|HGNC=|MCL_coexpression_id=8|UniProt=O88451|association_with_transcript=36bp_to_NM_017473_5end|description=CAGE_peak_2_at_Rdh7_5end|id=chr10:127325700..127325718,-|ontology_enrichment_celltype=CL:0002563!9.75e-09!9;CL:0002251!9.75e-09!9;CL:0000066!3.56e-08!25;CL:0000223!5.17e-07!20|ontology_enrichment_celltype_v019_2=CL:0000066,2.62e-14,25;CL:0002563,3.86e-13,9;CL:0002251,3.86e-13,9;CL:0000223,5.42e-12,20;CL:0000239,1.17e-09,6;CL:0000677,1.17e-09,6;CL:0000584,1.17e-09,6;CL:0000075,3.69e-08,7;CL:0002076,3.70e-07,15;CL:0000182,6.00e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!6.53e-13!22;UBERON:0007499!6.53e-13!22;UBERON:0006925!6.53e-13!22;UBERON:0009497!6.53e-13!22;UBERON:0000015!6.53e-13!22;UBERON:0002423!6.53e-13!22;UBERON:0006235!6.53e-13!22;UBERON:0008835!6.53e-13!22;UBERON:0003894!6.53e-13!22;UBERON:0004161!6.53e-13!22;UBERON:0008836!6.53e-13!22;UBERON:0009854!4.56e-12!23;UBERON:0009856!4.56e-12!23;UBERON:0000344!1.67e-11!15;UBERON:0002365!1.36e-10!25;UBERON:0002330!1.36e-10!25;UBERON:0001242!8.46e-10!13;UBERON:0000060!8.46e-10!13;UBERON:0001262!8.46e-10!13;UBERON:0004786!8.46e-10!13;UBERON:0000160!1.10e-09!43;UBERON:0001007!3.47e-09!128;UBERON:0001555!3.47e-09!128;UBERON:0007026!3.47e-09!128;UBERON:0005409!4.61e-09!59;UBERON:0004119!8.39e-09!130;UBERON:0000925!8.39e-09!130;UBERON:0006595!8.39e-09!130;UBERON:0003350!9.75e-09!9;UBERON:0004808!9.75e-09!9;UBERON:0001277!9.75e-09!9;UBERON:0004921!3.30e-08!126;UBERON:0004185!3.30e-08!126;UBERON:0003929!2.17e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.90e-19,22;UBERON:0007499,1.90e-19,22;UBERON:0006925,1.90e-19,22;UBERON:0009497,1.90e-19,22;UBERON:0000015,1.90e-19,22;UBERON:0002423,1.90e-19,22;UBERON:0006235,1.90e-19,22;UBERON:0008835,1.90e-19,22;UBERON:0003894,1.90e-19,22;UBERON:0004161,1.90e-19,22;UBERON:0008836,1.90e-19,22;UBERON:0000160,6.83e-19,31;UBERON:0001007,1.39e-18,116;UBERON:0001555,1.39e-18,116;UBERON:0007026,1.39e-18,116;UBERON:0009854,2.16e-18,23;UBERON:0009856,2.16e-18,23;UBERON:0004119,4.44e-18,118;UBERON:0000925,4.44e-18,118;UBERON:0006595,4.44e-18,118;UBERON:0000344,6.00e-18,15;UBERON:0004921,1.01e-16,114;UBERON:0002365,1.54e-16,25;UBERON:0002330,1.54e-16,25;UBERON:0005409,6.39e-16,47;UBERON:0001242,3.46e-15,13;UBERON:0001262,3.46e-15,13;UBERON:0004786,3.46e-15,13;UBERON:0003929,1.52e-14,55;UBERON:0003350,3.86e-13,9;UBERON:0004808,3.86e-13,9;UBERON:0001277,3.86e-13,9;UBERON:0000490,5.74e-11,66;UBERON:0000485,2.06e-10,11;UBERON:0005911,3.39e-10,69;UBERON:0004923,6.36e-10,24;UBERON:0005256,3.33e-07,45|phase1_expression=0,8.02643437570531,8.18998630901165,10.2837831844322,10.5188103288733,2.85394762250213,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,4.95976510659561,7.11168771308227,9.76194338995534,12.0613358924541,9.04979177280734,1.14014051673824,2.77233142735924,0,0,0,0,2.59966457776147,1.82858109894342,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.6254326188832,71.3969900393138,139.783126634195,127.356177819743,87.3652429839804,23.1733293217391,0,0,0,0,0,0,0,0,0,0,35.6253704723467,0,0.29688427812965,0,0,0.461230994512117,0.301445281105245,0.470354828542819,0.125666591329675,0,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61711931072457,2.3800550999719,0,0,0,0,0,0.190225626112559,3.32170343081158,0.494096864172033,1.00534083520108,1.1937388322469,1.36474860983384,3.59527763461689,4.53889904736858,9.55878111620963,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,63.4408621966499,0,0,0,0,0.72353147925725,4.83789118384698,13.8094145976389,21.7261203878547,47.22456306835,74.7594673942244,37.9583766621873,42.7491612166948,30.0568864757063,48.0785068238725,65.6123189054179,0,0,0,0,0,0,0.476087281772027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,0,0,0,0,0.283076530788832,0,0,0,0,0,0.534196811001766,0,0,0,0,0,0,0,0,0.516856586336442,0,0.712994756769443,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.41257840585672,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0,0.108005340821801,0,0.436725127492355,1.88810084938749,4.79390043206948,3.66458318777641,0,0,0,0.149516546043979,0,0,0,0,0,0.39061315453185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.551530525350042,0.888986911206461,0.618105171716683,0.320919209591815,0.505394423527595,0.50695859978048,0.754505365544305,0.936415074698824,0.832326981263301,0.804096565378586,1.42888107384922,0.347652977834566,0.77163688185482,1.23625770240992,0.441596760403192,0,0,0.953744759789284,0.872078499793971,0.658765662907314,0.592302255241736,0.365855945745545,0.789209134313529,1.35804113845862,0,0.830445126869219,0.788035859004508,0.818462086339379,1.23949472948773,0.578719832943424,0,1.87145286756327,2.36358159453128,0,0.220591419119515,0|short_description=p2@Rdh7}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54150 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=O88451 | |||
|association_with_transcript=36bp_to_NM_017473_5end | |||
|cluster_id=chr10:127325700..127325718,- | |||
|description=CAGE_peak_2_at_Rdh7_5end | |||
|id=chr10:127325700..127325718,- | |||
|ontology_enrichment_celltype=CL:0002563!9.75e-09!9;CL:0002251!9.75e-09!9;CL:0000066!3.56e-08!25;CL:0000223!5.17e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.62e-14,25;CL:0002563,3.86e-13,9;CL:0002251,3.86e-13,9;CL:0000223,5.42e-12,20;CL:0000239,1.17e-09,6;CL:0000677,1.17e-09,6;CL:0000584,1.17e-09,6;CL:0000075,3.69e-08,7;CL:0002076,3.70e-07,15;CL:0000182,6.00e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.53e-13!22;UBERON:0007499!6.53e-13!22;UBERON:0006925!6.53e-13!22;UBERON:0009497!6.53e-13!22;UBERON:0000015!6.53e-13!22;UBERON:0002423!6.53e-13!22;UBERON:0006235!6.53e-13!22;UBERON:0008835!6.53e-13!22;UBERON:0003894!6.53e-13!22;UBERON:0004161!6.53e-13!22;UBERON:0008836!6.53e-13!22;UBERON:0009854!4.56e-12!23;UBERON:0009856!4.56e-12!23;UBERON:0000344!1.67e-11!15;UBERON:0002365!1.36e-10!25;UBERON:0002330!1.36e-10!25;UBERON:0001242!8.46e-10!13;UBERON:0000060!8.46e-10!13;UBERON:0001262!8.46e-10!13;UBERON:0004786!8.46e-10!13;UBERON:0000160!1.10e-09!43;UBERON:0001007!3.47e-09!128;UBERON:0001555!3.47e-09!128;UBERON:0007026!3.47e-09!128;UBERON:0005409!4.61e-09!59;UBERON:0004119!8.39e-09!130;UBERON:0000925!8.39e-09!130;UBERON:0006595!8.39e-09!130;UBERON:0003350!9.75e-09!9;UBERON:0004808!9.75e-09!9;UBERON:0001277!9.75e-09!9;UBERON:0004921!3.30e-08!126;UBERON:0004185!3.30e-08!126;UBERON:0003929!2.17e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.90e-19,22;UBERON:0007499,1.90e-19,22;UBERON:0006925,1.90e-19,22;UBERON:0009497,1.90e-19,22;UBERON:0000015,1.90e-19,22;UBERON:0002423,1.90e-19,22;UBERON:0006235,1.90e-19,22;UBERON:0008835,1.90e-19,22;UBERON:0003894,1.90e-19,22;UBERON:0004161,1.90e-19,22;UBERON:0008836,1.90e-19,22;UBERON:0000160,6.83e-19,31;UBERON:0001007,1.39e-18,116;UBERON:0001555,1.39e-18,116;UBERON:0007026,1.39e-18,116;UBERON:0009854,2.16e-18,23;UBERON:0009856,2.16e-18,23;UBERON:0004119,4.44e-18,118;UBERON:0000925,4.44e-18,118;UBERON:0006595,4.44e-18,118;UBERON:0000344,6.00e-18,15;UBERON:0004921,1.01e-16,114;UBERON:0002365,1.54e-16,25;UBERON:0002330,1.54e-16,25;UBERON:0005409,6.39e-16,47;UBERON:0001242,3.46e-15,13;UBERON:0001262,3.46e-15,13;UBERON:0004786,3.46e-15,13;UBERON:0003929,1.52e-14,55;UBERON:0003350,3.86e-13,9;UBERON:0004808,3.86e-13,9;UBERON:0001277,3.86e-13,9;UBERON:0000490,5.74e-11,66;UBERON:0000485,2.06e-10,11;UBERON:0005911,3.39e-10,69;UBERON:0004923,6.36e-10,24;UBERON:0005256,3.33e-07,45 | |||
|phase1_expression=0,8.02643437570531,8.18998630901165,10.2837831844322,10.5188103288733,2.85394762250213,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,4.95976510659561,7.11168771308227,9.76194338995534,12.0613358924541,9.04979177280734,1.14014051673824,2.77233142735924,0,0,0,0,2.59966457776147,1.82858109894342,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.6254326188832,71.3969900393138,139.783126634195,127.356177819743,87.3652429839804,23.1733293217391,0,0,0,0,0,0,0,0,0,0,35.6253704723467,0,0.29688427812965,0,0,0.461230994512117,0.301445281105245,0.470354828542819,0.125666591329675,0,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61711931072457,2.3800550999719,0,0,0,0,0,0.190225626112559,3.32170343081158,0.494096864172033,1.00534083520108,1.1937388322469,1.36474860983384,3.59527763461689,4.53889904736858,9.55878111620963,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,63.4408621966499,0,0,0,0,0.72353147925725,4.83789118384698,13.8094145976389,21.7261203878547,47.22456306835,74.7594673942244,37.9583766621873,42.7491612166948,30.0568864757063,48.0785068238725,65.6123189054179,0,0,0,0,0,0,0.476087281772027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,0,0,0,0,0.283076530788832,0,0,0,0,0,0.534196811001766,0,0,0,0,0,0,0,0,0.516856586336442,0,0.712994756769443,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.41257840585672,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0,0.108005340821801,0,0.436725127492355,1.88810084938749,4.79390043206948,3.66458318777641,0,0,0,0.149516546043979,0,0,0,0,0,0.39061315453185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.551530525350042,0.888986911206461,0.618105171716683,0.320919209591815,0.505394423527595,0.50695859978048,0.754505365544305,0.936415074698824,0.832326981263301,0.804096565378586,1.42888107384922,0.347652977834566,0.77163688185482,1.23625770240992,0.441596760403192,0,0,0.953744759789284,0.872078499793971,0.658765662907314,0.592302255241736,0.365855945745545,0.789209134313529,1.35804113845862,0,0.830445126869219,0.788035859004508,0.818462086339379,1.23949472948773,0.578719832943424,0,1.87145286756327,2.36358159453128,0,0.220591419119515,0 | |||
|short_description=p2@Rdh7 | |||
}} |
Latest revision as of 18:17, 25 September 2015
Short description: | p2@Rdh7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rdh7_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 36bp_to_NM_017473_5end |
EntrezGene: | Rdh7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.62e-14 | 25 |
intestinal epithelial cell | 3.86e-13 | 9 |
epithelial cell of alimentary canal | 3.86e-13 | 9 |
endodermal cell | 5.42e-12 | 20 |
brush border epithelial cell | 1.17e-09 | 6 |
gut absorptive cell | 1.17e-09 | 6 |
enterocyte | 1.17e-09 | 6 |
columnar/cuboidal epithelial cell | 3.69e-08 | 7 |
endo-epithelial cell | 3.70e-07 | 15 |
hepatocyte | 6.00e-07 | 5 |