FFCP PHASE1:Mm9::chr10:56098964..56098995,+: Difference between revisions
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{{FFCP|EntrezGene=14609|HGNC=|MCL_coexpression_id=26|UniProt=|association_with_transcript=70bp_to_uc007fch.2,uc007fci.2_5end|description=CAGE_peak_8_at_Gja1_5end|id=chr10:56098964..56098995,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002293,4.15e-39,3;CL:0000213,2.87e-30,1;CL:0002078,2.87e-30,1;CL:0000115,2.87e-30,1;CL:0002262,2.87e-30,1;CL:1000398,2.87e-30,1;CL:0000223,4.59e-14,20;CL:0000066,1.80e-11,25;CL:0000215,4.56e-11,3;CL:0002076,8.43e-09,15;CL:0000182,3.64e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.87e-30,1;UBERON:0001281,2.87e-30,1;UBERON:0000353,2.87e-30,1;UBERON:0003497,2.87e-30,1;UBERON:0003909,2.87e-30,1;UBERON:0003928,2.87e-30,1;UBERON:0003835,2.87e-30,1;UBERON:0003513,2.87e-30,1;UBERON:0001280,2.87e-30,1;UBERON:0004647,2.87e-30,1;UBERON:0002294,2.87e-30,1;UBERON:0001173,2.87e-30,1;UBERON:0004912,2.87e-30,1;UBERON:0005171,2.87e-30,1;UBERON:0000077,1.72e-08,35;UBERON:0000055,3.64e-07,5;UBERON:0007500,3.64e-07,5;UBERON:0001981,3.64e-07,5;UBERON:0002049,3.64e-07,5;UBERON:0007798,3.64e-07,5;UBERON:0004537,3.64e-07,5;UBERON:0006965,3.64e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,20.5803786978191,0.860423876981386,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,1.28326477414318,2.54805239706646,0,0,0,0,0,0,0,0,0.608930956624282,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0.203678727700633,0.248813941220186,0,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0.204109497453984,0,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0.703578179943289,0,0,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.162137619091711,0,0.439100230582101,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0.169745085775188,0,0.167506257441816,0.476087281772027,0.195133647857799,0,0,0.159454768657487,0.327726629431476,0.345369963731791,0,0,0,0,0.275936746304732,0,0.234423373184406,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0.716906393857656,0.222798674082394,0.566153061577665,0,0,0.395287777946524,0,0.567760340833074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0,0.356737635204141,0.329098041204242,0,0,0,0,0.16488625294148,0.484393280087717,0.0603129249281559,0.119372344003136,0.328281799490123,0.291480836629851,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0.685082519770642,0,0.675022500231806,0,0,0,0.207574695168353,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0.231867835620421|short_description=p8@Gja1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14609 | |||
|HGNC= | |||
|MCL_coexpression_id=26 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=70bp_to_uc007fch.2,uc007fci.2_5end | |||
|cluster_id=chr10:56098964..56098995,+ | |||
|description=CAGE_peak_8_at_Gja1_5end | |||
|id=chr10:56098964..56098995,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,4.15e-39,3;CL:0000213,2.87e-30,1;CL:0002078,2.87e-30,1;CL:0000115,2.87e-30,1;CL:0002262,2.87e-30,1;CL:1000398,2.87e-30,1;CL:0000223,4.59e-14,20;CL:0000066,1.80e-11,25;CL:0000215,4.56e-11,3;CL:0002076,8.43e-09,15;CL:0000182,3.64e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.87e-30,1;UBERON:0001281,2.87e-30,1;UBERON:0000353,2.87e-30,1;UBERON:0003497,2.87e-30,1;UBERON:0003909,2.87e-30,1;UBERON:0003928,2.87e-30,1;UBERON:0003835,2.87e-30,1;UBERON:0003513,2.87e-30,1;UBERON:0001280,2.87e-30,1;UBERON:0004647,2.87e-30,1;UBERON:0002294,2.87e-30,1;UBERON:0001173,2.87e-30,1;UBERON:0004912,2.87e-30,1;UBERON:0005171,2.87e-30,1;UBERON:0000077,1.72e-08,35;UBERON:0000055,3.64e-07,5;UBERON:0007500,3.64e-07,5;UBERON:0001981,3.64e-07,5;UBERON:0002049,3.64e-07,5;UBERON:0007798,3.64e-07,5;UBERON:0004537,3.64e-07,5;UBERON:0006965,3.64e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,20.5803786978191,0.860423876981386,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,1.28326477414318,2.54805239706646,0,0,0,0,0,0,0,0,0.608930956624282,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0.203678727700633,0.248813941220186,0,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0.204109497453984,0,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0.703578179943289,0,0,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.162137619091711,0,0.439100230582101,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0.169745085775188,0,0.167506257441816,0.476087281772027,0.195133647857799,0,0,0.159454768657487,0.327726629431476,0.345369963731791,0,0,0,0,0.275936746304732,0,0.234423373184406,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0.716906393857656,0.222798674082394,0.566153061577665,0,0,0.395287777946524,0,0.567760340833074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0,0.356737635204141,0.329098041204242,0,0,0,0,0.16488625294148,0.484393280087717,0.0603129249281559,0.119372344003136,0.328281799490123,0.291480836629851,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0.685082519770642,0,0.675022500231806,0,0,0,0.207574695168353,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0.231867835620421 | |||
|short_description=p8@Gja1 | |||
}} |
Latest revision as of 02:19, 26 September 2015
Short description: | p8@Gja1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Gja1_5end |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | 70bp_to_uc007fch.2, uc007fci.2_5end |
EntrezGene: | Gja1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 4.15e-39 | 3 |
lining cell | 2.87e-30 | 1 |
meso-epithelial cell | 2.87e-30 | 1 |
endothelial cell | 2.87e-30 | 1 |
endothelial cell of sinusoid | 2.87e-30 | 1 |
endothelial cell of hepatic sinusoid | 2.87e-30 | 1 |
endodermal cell | 4.59e-14 | 20 |
epithelial cell | 1.80e-11 | 25 |
barrier cell | 4.56e-11 | 3 |
endo-epithelial cell | 8.43e-09 | 15 |
hepatocyte | 3.64e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bile duct | 2.87e-30 | 1 |
hepatic sinusoid | 2.87e-30 | 1 |
parenchyma | 2.87e-30 | 1 |
abdomen blood vessel | 2.87e-30 | 1 |
sinusoid | 2.87e-30 | 1 |
digestive system duct | 2.87e-30 | 1 |
abdominal segment blood vessel | 2.87e-30 | 1 |
trunk blood vessel | 2.87e-30 | 1 |
liver parenchyma | 2.87e-30 | 1 |
liver lobule | 2.87e-30 | 1 |
biliary system | 2.87e-30 | 1 |
biliary tree | 2.87e-30 | 1 |
biliary bud | 2.87e-30 | 1 |
hepatic duct | 2.87e-30 | 1 |
mixed endoderm/mesoderm-derived structure | 1.72e-08 | 35 |
vessel | 3.64e-07 | 5 |
epithelial tube open at both ends | 3.64e-07 | 5 |
blood vessel | 3.64e-07 | 5 |
vasculature | 3.64e-07 | 5 |
vascular system | 3.64e-07 | 5 |
blood vasculature | 3.64e-07 | 5 |
vascular cord | 3.64e-07 | 5 |