FFCP PHASE1:Mm9::chr10:79516774..79516788,+: Difference between revisions
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{{FFCP|EntrezGene=625249|HGNC=|MCL_coexpression_id=0|UniProt=Q76LV0,O70325,Q91XR9|association_with_transcript=0bp_to_ENSMUST00000097227,ENSMUST00000145703,NM_001037741,uc007gbl.1_5end|description=CAGE_peak_3_at_Gpx4_5end|id=chr10:79516774..79516788,+|ontology_enrichment_celltype=CL:0002321!6.55e-08!70;CL:0000220!6.55e-08!70;CL:0000221!5.10e-07!44;CL:0000133!5.10e-07!44|ontology_enrichment_celltype_v019_2=CL:0002614,2.13e-11,3;CL:0002194,2.50e-09,4;CL:0000766,2.50e-09,4;CL:0000234,2.50e-09,4;CL:0000576,2.50e-09,4;CL:0000235,2.50e-09,4;CL:0000864,2.50e-09,4;CL:0002009,2.50e-09,4;CL:0000040,2.50e-09,4;CL:0000559,2.50e-09,4;CL:0000473,6.66e-09,7;CL:0000878,8.16e-09,2;CL:0000129,8.16e-09,2;CL:0002453,6.60e-08,8;CL:0000182,3.22e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.79e-07!75;UBERON:0001016!2.79e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0002038,2.13e-11,3;UBERON:0009663,2.13e-11,3;UBERON:0009661,2.13e-11,3;UBERON:0000125,2.13e-11,3;UBERON:0002308,2.13e-11,3;UBERON:0002950,1.14e-08,4;UBERON:0001891,1.14e-08,4;UBERON:0009616,1.14e-08,4;UBERON:0010286,1.14e-08,4|phase1_expression=0,0.348975407639361,1.36499771816861,0.90739263392049,0,0.503637815735669,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,42.4366017853838,0,0,0,0,1.14846392823004,0,0.430942465371778,0.190023419456374,0,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0.485510353031154,0.251793635951155,0,0.734187008646726,0,0.436050312760893,0.659058548203415,1.94429899074283,0.279972843250725,1.43752564364972,0,0,0,0.257259436035947,0,0,0.202316460859598,0,0.633831403506179,0,0,0.899899717281399,0,0,1.49800055259202,10.373894243682,0,0,0,0.856952953211411,0,0.244981598429908,0,0,1.10115880999389,0.383062014255563,0.614426133024974,0.131886287730194,0.0914876436024097,0,1.95428099300967,1.12552522006336,1.06958773443767,0,1.13897344639282,0.186399445825301,0.454357159999104,0.529000920747499,1.44932244350839,0,2.719885334831,1.07940638327563,0,0,4.49422144421606,0.170430322578058,0,0,0.422530259330042,0,0,0,0,0.253359865475099,0,6.2801133845483,0,0,0.173485326766136,0,0.691846491768175,0.301445281105245,0.23517741427141,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0.41889341362691,0,0.479260498023681,1.19980546198682,0.254140454146129,0.149790639404823,0,0.251308704225729,0,0.511430914660661,0.20778804455956,0.486723789203273,0,0,1.76905930903572,0,0.390361328888111,0,0.180062129805349,0.30140963567143,0.204109497453984,0,0.187403449119458,0,0,0.189106080167819,0,0.219195732427575,0,0,0,0.199034266818493,0.702213187313235,0.772043721344145,0.284163499395593,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0.233530684734339,0,0.164167464079095,0.243206428637567,0.146199987425332,0,0.134206418760372,0.420579897128254,0.411618449517138,0.330418782983798,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.280543279561274,0.632365371242573,1.03327103585722,0.470996183524124,0.987177311374404,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0.358794827043824,0,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0,0.144649058581512,1.50791283939272,0.54390568381871,0,0,0.481651769963376,0.35163505977661,0,0,0,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0.404810701674894,0.876767573733936,0.395287777946524,0,0.141940085208269,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0.258717367565509,0,0,0,0,0.608929898229199,0.23467170806371,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0.679913719975421,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,256.480287101307,0,0.165458490457098,0,0.258319646955462,0,0,0,0.104859344425711,1.20792060413003,88.1371819149068,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0.116876902181569,0.226730383615211,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0.343706364687375,0.685082519770642,0,0,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0,0,0,0.561142271657738,0.237270036248348,0,0,0.309873682371932,0,0.249810577937946,0,0,0,0.220591419119515,0|short_description=p3@Gpx4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=625249 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q76LV0,O70325,Q91XR9 | |||
|association_with_transcript=0bp_to_ENSMUST00000097227,ENSMUST00000145703,NM_001037741,uc007gbl.1_5end | |||
|cluster_id=chr10:79516774..79516788,+ | |||
|description=CAGE_peak_3_at_Gpx4_5end | |||
|id=chr10:79516774..79516788,+ | |||
|ontology_enrichment_celltype=CL:0002321!6.55e-08!70;CL:0000220!6.55e-08!70;CL:0000221!5.10e-07!44;CL:0000133!5.10e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,2.13e-11,3;CL:0002194,2.50e-09,4;CL:0000766,2.50e-09,4;CL:0000234,2.50e-09,4;CL:0000576,2.50e-09,4;CL:0000235,2.50e-09,4;CL:0000864,2.50e-09,4;CL:0002009,2.50e-09,4;CL:0000040,2.50e-09,4;CL:0000559,2.50e-09,4;CL:0000473,6.66e-09,7;CL:0000878,8.16e-09,2;CL:0000129,8.16e-09,2;CL:0002453,6.60e-08,8;CL:0000182,3.22e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.79e-07!75;UBERON:0001016!2.79e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,2.13e-11,3;UBERON:0009663,2.13e-11,3;UBERON:0009661,2.13e-11,3;UBERON:0000125,2.13e-11,3;UBERON:0002308,2.13e-11,3;UBERON:0002950,1.14e-08,4;UBERON:0001891,1.14e-08,4;UBERON:0009616,1.14e-08,4;UBERON:0010286,1.14e-08,4 | |||
|phase1_expression=0,0.348975407639361,1.36499771816861,0.90739263392049,0,0.503637815735669,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,42.4366017853838,0,0,0,0,1.14846392823004,0,0.430942465371778,0.190023419456374,0,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0.485510353031154,0.251793635951155,0,0.734187008646726,0,0.436050312760893,0.659058548203415,1.94429899074283,0.279972843250725,1.43752564364972,0,0,0,0.257259436035947,0,0,0.202316460859598,0,0.633831403506179,0,0,0.899899717281399,0,0,1.49800055259202,10.373894243682,0,0,0,0.856952953211411,0,0.244981598429908,0,0,1.10115880999389,0.383062014255563,0.614426133024974,0.131886287730194,0.0914876436024097,0,1.95428099300967,1.12552522006336,1.06958773443767,0,1.13897344639282,0.186399445825301,0.454357159999104,0.529000920747499,1.44932244350839,0,2.719885334831,1.07940638327563,0,0,4.49422144421606,0.170430322578058,0,0,0.422530259330042,0,0,0,0,0.253359865475099,0,6.2801133845483,0,0,0.173485326766136,0,0.691846491768175,0.301445281105245,0.23517741427141,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0.41889341362691,0,0.479260498023681,1.19980546198682,0.254140454146129,0.149790639404823,0,0.251308704225729,0,0.511430914660661,0.20778804455956,0.486723789203273,0,0,1.76905930903572,0,0.390361328888111,0,0.180062129805349,0.30140963567143,0.204109497453984,0,0.187403449119458,0,0,0.189106080167819,0,0.219195732427575,0,0,0,0.199034266818493,0.702213187313235,0.772043721344145,0.284163499395593,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0.233530684734339,0,0.164167464079095,0.243206428637567,0.146199987425332,0,0.134206418760372,0.420579897128254,0.411618449517138,0.330418782983798,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.280543279561274,0.632365371242573,1.03327103585722,0.470996183524124,0.987177311374404,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0.358794827043824,0,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0,0.144649058581512,1.50791283939272,0.54390568381871,0,0,0.481651769963376,0.35163505977661,0,0,0,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0.404810701674894,0.876767573733936,0.395287777946524,0,0.141940085208269,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0.258717367565509,0,0,0,0,0.608929898229199,0.23467170806371,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0.679913719975421,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,256.480287101307,0,0.165458490457098,0,0.258319646955462,0,0,0,0.104859344425711,1.20792060413003,88.1371819149068,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0.116876902181569,0.226730383615211,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0.343706364687375,0.685082519770642,0,0,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0,0,0,0.561142271657738,0.237270036248348,0,0,0.309873682371932,0,0.249810577937946,0,0,0,0.220591419119515,0 | |||
|short_description=p3@Gpx4 | |||
}} |
Latest revision as of 09:23, 26 September 2015
Short description: | p3@Gpx4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gpx4_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000097227, ENSMUST00000145703, NM_001037741, uc007gbl.1_5end |
EntrezGene: | Gpx4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 2.13e-11 | 3 |
monopoietic cell | 2.50e-09 | 4 |
myeloid leukocyte | 2.50e-09 | 4 |
phagocyte | 2.50e-09 | 4 |
monocyte | 2.50e-09 | 4 |
macrophage | 2.50e-09 | 4 |
tissue-resident macrophage | 2.50e-09 | 4 |
macrophage dendritic cell progenitor | 2.50e-09 | 4 |
monoblast | 2.50e-09 | 4 |
promonocyte | 2.50e-09 | 4 |
defensive cell | 6.66e-09 | 7 |
central nervous system macrophage | 8.16e-09 | 2 |
microglial cell | 8.16e-09 | 2 |
oligodendrocyte precursor cell | 6.60e-08 | 8 |
hepatocyte | 3.22e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 2.13e-11 | 3 |
telencephalic nucleus | 2.13e-11 | 3 |
midbrain nucleus | 2.13e-11 | 3 |
neural nucleus | 2.13e-11 | 3 |
nucleus of brain | 2.13e-11 | 3 |
regional part of midbrain | 1.14e-08 | 4 |
midbrain | 1.14e-08 | 4 |
presumptive midbrain | 1.14e-08 | 4 |
midbrain neural tube | 1.14e-08 | 4 |