FFCP PHASE1:Hg19::chr2:74753294..74753302,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=165545 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20410 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TE96 | |||
|association_with_transcript=15bp_to_ENST00000393951_5end | |||
|cluster_id=chr2:74753294..74753302,- | |||
|coexpression_cluster_id=C611 | |||
|description=CAGE_peak_6_at_DQX1_5end | |||
|id=chr2:74753294..74753302,- | |||
|ontology_enrichment_celltype=CL:0000223!4.93e-12!59;CL:0000313!4.87e-09!1;CL:0000181!7.85e-07!12;CL:0000417!7.85e-07!12;CL:0000668!7.85e-07!12;CL:0000414!7.85e-07!12;CL:0000412!7.85e-07!12;CL:0000182!7.85e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.45e-30;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.01e-30,12;CL:0000223,5.90e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.34e-33;11!UBERON:0009497;4.39e-28;13!UBERON:0001041;1.07e-12;30!UBERON:0003104;4.69e-12;31 | |||
|ontology_enrichment_disease=DOID:2152!4.87e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:7;2.18e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,5.54e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0000160!4.39e-10!27;UBERON:0000997!2.35e-09!1;UBERON:0005056!2.35e-09!1;UBERON:0004119!3.02e-09!169;UBERON:0000925!3.02e-09!169;UBERON:0006595!3.02e-09!169;UBERON:0004911!4.87e-09!1;UBERON:0005409!9.95e-08!35;UBERON:0001007!1.20e-07!155;UBERON:0001555!1.20e-07!155;UBERON:0007026!1.20e-07!155;UBERON:0004921!6.33e-07!129;UBERON:0004185!6.33e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.69e-32;4!UBERON:0002107;1.58e-19;19!UBERON:0006925;1.58e-19;19!UBERON:0002423;4.61e-15;25!UBERON:0002114;1.60e-14;2!UBERON:0002365;2.05e-11;31!UBERON:0002330;2.05e-11;31!UBERON:0002368;8.99e-11;33!UBERON:0000160;7.75e-10;17!UBERON:0000949;1.83e-08;43!UBERON:0005409;6.52e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.34e-32,4;UBERON:0002107,1.39e-19,19;UBERON:0006925,1.39e-19,19;UBERON:0008836,1.39e-19,19;UBERON:0008835,4.85e-17,22;UBERON:0003894,4.85e-17,22;UBERON:0009854,2.44e-16,23;UBERON:0007499,4.19e-15,25;UBERON:0009497,4.19e-15,25;UBERON:0000015,4.19e-15,25;UBERON:0002423,4.19e-15,25;UBERON:0006235,4.19e-15,25;UBERON:0004161,4.19e-15,25;UBERON:0009856,1.48e-14,26;UBERON:0002114,2.09e-14,2;UBERON:0002365,2.39e-12,31;UBERON:0002330,2.39e-12,31;UBERON:0002368,4.95e-11,35;UBERON:0000160,8.47e-10,17;UBERON:0004921,6.01e-09,118;UBERON:0000949,9.36e-09,45;UBERON:0003929,2.03e-07,54;UBERON:0005172,2.03e-07,54;UBERON:0005173,2.03e-07,54;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0005409,4.41e-07,25;UBERON:0002530,7.53e-07,59;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160;UBERON:0002417,9.53e-07,60;UBERON:0000916,9.53e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41809728153003,1.07140615895516,1.88729922791718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,1.389134845943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@DQX1 | |||
}} |
Latest revision as of 11:40, 18 September 2015
Short description: | p6@DQX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DQX1_5end |
Coexpression cluster: | C611_small_hepatocellular_colon_adenocarcinoma_Intestinal_signet_temporal |
Association with transcript: | 15bp_to_ENST00000393951_5end |
EntrezGene: | DQX1 |
HGNC: | 20410 |
UniProt: | Q8TE96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.01e-30 | 12 |
endodermal cell | 5.90e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
small intestine | 2.34e-32 | 4 |
liver | 1.39e-19 | 19 |
digestive gland | 1.39e-19 | 19 |
liver bud | 1.39e-19 | 19 |
hepatic diverticulum | 4.85e-17 | 22 |
liver primordium | 4.85e-17 | 22 |
digestive tract diverticulum | 2.44e-16 | 23 |
epithelial sac | 4.19e-15 | 25 |
epithelium of foregut-midgut junction | 4.19e-15 | 25 |
anatomical boundary | 4.19e-15 | 25 |
hepatobiliary system | 4.19e-15 | 25 |
foregut-midgut junction | 4.19e-15 | 25 |
septum transversum | 4.19e-15 | 25 |
sac | 1.48e-14 | 26 |
duodenum | 2.09e-14 | 2 |
exocrine gland | 2.39e-12 | 31 |
exocrine system | 2.39e-12 | 31 |
endocrine gland | 4.95e-11 | 35 |
intestine | 8.47e-10 | 17 |
subdivision of digestive tract | 6.01e-09 | 118 |
endocrine system | 9.36e-09 | 45 |
gut epithelium | 2.03e-07 | 54 |
abdomen element | 2.03e-07 | 54 |
abdominal segment element | 2.03e-07 | 54 |
digestive system | 2.16e-07 | 145 |
digestive tract | 2.16e-07 | 145 |
primitive gut | 2.16e-07 | 145 |
gastrointestinal system | 4.41e-07 | 25 |
gland | 7.53e-07 | 59 |
endoderm-derived structure | 9.48e-07 | 160 |
endoderm | 9.48e-07 | 160 |
presumptive endoderm | 9.48e-07 | 160 |
abdominal segment of trunk | 9.53e-07 | 60 |
abdomen | 9.53e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 5.54e-10 | 39 |