FFCP PHASE1:Mm9::chr11:96160068..96160084,+: Difference between revisions
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{{FFCP|EntrezGene=15414|HGNC=|MCL_coexpression_id=1601|UniProt=P09023|association_with_transcript=-184bp_to_ENSMUST00000000704_5end|description=CAGE_peak_6_at_Hoxb6_5end|id=chr11:96160068..96160084,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002612,1.60e-13,3;CL:0002611,1.64e-09,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!7.41e-16!21;UBERON:0002342!1.19e-10!10;UBERON:0005062!1.19e-10!10;UBERON:0002113!1.30e-10!14;UBERON:0003918!1.30e-10!14;UBERON:0005095!1.30e-10!14;UBERON:0007687!1.30e-10!14;UBERON:0003064!2.33e-10!14;UBERON:0001008!1.37e-09!17;UBERON:0006554!8.31e-09!16;UBERON:0002240!5.66e-08!6;UBERON:0005174!5.66e-08!6;UBERON:0001137!5.66e-08!6;UBERON:0002369!9.40e-08!7;UBERON:0006858!9.40e-08!7;UBERON:0005157!1.09e-07!27;UBERON:0001948!4.49e-07!5;UBERON:0002315!4.49e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000489,8.06e-33,21;UBERON:0001948,2.26e-21,5;UBERON:0002315,2.26e-21,5;UBERON:0002113,4.93e-19,14;UBERON:0003918,4.93e-19,14;UBERON:0011143,4.93e-19,14;UBERON:0005095,4.93e-19,14;UBERON:0007687,4.93e-19,14;UBERON:0002240,8.55e-18,6;UBERON:0005174,8.55e-18,6;UBERON:0001137,8.55e-18,6;UBERON:0003103,6.31e-15,43;UBERON:0006554,1.42e-14,18;UBERON:0001008,9.47e-14,19;UBERON:0002257,1.60e-13,3;UBERON:0003064,1.15e-10,14;UBERON:0000080,1.99e-10,4;UBERON:0005904,1.99e-10,4;UBERON:0006947,1.99e-10,4;UBERON:0002120,1.99e-10,4;UBERON:0004054,1.99e-10,4;UBERON:0004875,1.99e-10,4;UBERON:0004876,1.99e-10,4;UBERON:0005721,1.99e-10,4;UBERON:0005754,1.99e-10,4;UBERON:0007297,1.99e-10,4;UBERON:0002256,1.64e-09,2;UBERON:0005172,5.76e-09,49;UBERON:0005173,5.76e-09,49;UBERON:0002417,5.76e-09,49;UBERON:0000916,5.76e-09,49;UBERON:0003076,8.16e-09,12;UBERON:0003057,8.16e-09,12;UBERON:0009569,1.73e-07,66;UBERON:0001301,4.27e-07,3;UBERON:0006555,4.27e-07,3;UBERON:0005103,4.27e-07,3;UBERON:0000083,4.27e-07,3;UBERON:0009201,4.27e-07,3;UBERON:0004819,4.27e-07,3;UBERON:0006553,4.27e-07,3;UBERON:0003074,4.27e-07,3;UBERON:0003060,4.27e-07,3;UBERON:0003104,7.61e-07,61;UBERON:0009142,7.61e-07,61|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.734187008646726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99955689082663,1.32521124570968,0,0,0,0,0,0,0,0,0,0,0,0,1.47314292736834,1.28134512719193,6.15118171223492,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,1.7813056687779,0.520455980298408,1.52232739156071,0.230615497256059,0.60289056221049,0.352766121407114,1.38233250462643,0,0.289198713839823,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407357455401265,3.35898820647251,17.1851475734899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19420560091096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853153002140936,0.696710015581316,0.77320476793256,0.201683524623343,0.22237804384487,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0,0,0,0,4.55202962287396,2.17072173958485,2.25415471346161,1.83286195060783,1.16371492300575,0.420814919341911,0.252946148497029,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70542270593436,0.325929952884052,0.509235257325564,0.234690248288502,0,0.238043640886014,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0.631016438832513,0.780877488593277,1.50796378412959,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0,0.141940085208269,0.178065603667255,0.325773918707152,0.329940245945071,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15420377059036,0.322928853391811,0.241251699712623,0.358117032009409,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.813277868507395,0,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0.39061315453185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915758121336325,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.830298780673413,1.19707462020309,0.341467211508268,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0,0.188626341386076,0.0936415074698824,0.384150914429216,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p6@Hoxb6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15414 | |||
|HGNC= | |||
|MCL_coexpression_id=1601 | |||
|TSSclassifier=NA | |||
|UniProt=P09023 | |||
|association_with_transcript=-184bp_to_ENSMUST00000000704_5end | |||
|cluster_id=chr11:96160068..96160084,+ | |||
|description=CAGE_peak_6_at_Hoxb6_5end | |||
|id=chr11:96160068..96160084,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.60e-13,3;CL:0002611,1.64e-09,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!7.41e-16!21;UBERON:0002342!1.19e-10!10;UBERON:0005062!1.19e-10!10;UBERON:0002113!1.30e-10!14;UBERON:0003918!1.30e-10!14;UBERON:0005095!1.30e-10!14;UBERON:0007687!1.30e-10!14;UBERON:0003064!2.33e-10!14;UBERON:0001008!1.37e-09!17;UBERON:0006554!8.31e-09!16;UBERON:0002240!5.66e-08!6;UBERON:0005174!5.66e-08!6;UBERON:0001137!5.66e-08!6;UBERON:0002369!9.40e-08!7;UBERON:0006858!9.40e-08!7;UBERON:0005157!1.09e-07!27;UBERON:0001948!4.49e-07!5;UBERON:0002315!4.49e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,8.06e-33,21;UBERON:0001948,2.26e-21,5;UBERON:0002315,2.26e-21,5;UBERON:0002113,4.93e-19,14;UBERON:0003918,4.93e-19,14;UBERON:0011143,4.93e-19,14;UBERON:0005095,4.93e-19,14;UBERON:0007687,4.93e-19,14;UBERON:0002240,8.55e-18,6;UBERON:0005174,8.55e-18,6;UBERON:0001137,8.55e-18,6;UBERON:0003103,6.31e-15,43;UBERON:0006554,1.42e-14,18;UBERON:0001008,9.47e-14,19;UBERON:0002257,1.60e-13,3;UBERON:0003064,1.15e-10,14;UBERON:0000080,1.99e-10,4;UBERON:0005904,1.99e-10,4;UBERON:0006947,1.99e-10,4;UBERON:0002120,1.99e-10,4;UBERON:0004054,1.99e-10,4;UBERON:0004875,1.99e-10,4;UBERON:0004876,1.99e-10,4;UBERON:0005721,1.99e-10,4;UBERON:0005754,1.99e-10,4;UBERON:0007297,1.99e-10,4;UBERON:0002256,1.64e-09,2;UBERON:0005172,5.76e-09,49;UBERON:0005173,5.76e-09,49;UBERON:0002417,5.76e-09,49;UBERON:0000916,5.76e-09,49;UBERON:0003076,8.16e-09,12;UBERON:0003057,8.16e-09,12;UBERON:0009569,1.73e-07,66;UBERON:0001301,4.27e-07,3;UBERON:0006555,4.27e-07,3;UBERON:0005103,4.27e-07,3;UBERON:0000083,4.27e-07,3;UBERON:0009201,4.27e-07,3;UBERON:0004819,4.27e-07,3;UBERON:0006553,4.27e-07,3;UBERON:0003074,4.27e-07,3;UBERON:0003060,4.27e-07,3;UBERON:0003104,7.61e-07,61;UBERON:0009142,7.61e-07,61 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.734187008646726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99955689082663,1.32521124570968,0,0,0,0,0,0,0,0,0,0,0,0,1.47314292736834,1.28134512719193,6.15118171223492,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,1.7813056687779,0.520455980298408,1.52232739156071,0.230615497256059,0.60289056221049,0.352766121407114,1.38233250462643,0,0.289198713839823,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407357455401265,3.35898820647251,17.1851475734899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19420560091096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853153002140936,0.696710015581316,0.77320476793256,0.201683524623343,0.22237804384487,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0,0,0,0,4.55202962287396,2.17072173958485,2.25415471346161,1.83286195060783,1.16371492300575,0.420814919341911,0.252946148497029,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70542270593436,0.325929952884052,0.509235257325564,0.234690248288502,0,0.238043640886014,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0.631016438832513,0.780877488593277,1.50796378412959,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0,0.141940085208269,0.178065603667255,0.325773918707152,0.329940245945071,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15420377059036,0.322928853391811,0.241251699712623,0.358117032009409,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.813277868507395,0,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0.39061315453185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915758121336325,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.830298780673413,1.19707462020309,0.341467211508268,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0,0.188626341386076,0.0936415074698824,0.384150914429216,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p6@Hoxb6 | |||
}} |
Latest revision as of 01:23, 26 September 2015
Short description: | p6@Hoxb6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Hoxb6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1601 |
Association with transcript: | -184bp_to_ENSMUST00000000704_5end |
EntrezGene: | Hoxb6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.60e-13 | 3 |
neuron of the dorsal spinal cord | 1.64e-09 | 2 |