FFCP PHASE1:Mm9::chr12:77356196..77356226,+: Difference between revisions
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{{FFCP|EntrezGene=108156|HGNC=|MCL_coexpression_id=8|UniProt=Q922D8,Q3TW74,Q8BXX7|association_with_transcript=0bp_to_ENSMUST00000021443,NM_138745,uc007nxz.2,uc011yny.1_5end|description=CAGE_peak_6_at_Mthfd1_5end|id=chr12:77356196..77356226,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000466!4.75e-19!79;UBERON:0005177!2.14e-18!85;UBERON:0009569!8.24e-16!66;UBERON:0000077!3.67e-15!97;UBERON:0001041!4.14e-15!92;UBERON:0002100!7.30e-15!98;UBERON:0003104!8.93e-15!131;UBERON:0009142!8.93e-15!131;UBERON:0005172!5.92e-14!49;UBERON:0005173!5.92e-14!49;UBERON:0002417!5.92e-14!49;UBERON:0000916!5.92e-14!49;UBERON:0009854!4.61e-13!23;UBERON:0009856!4.61e-13!23;UBERON:0002107!1.98e-12!22;UBERON:0007499!1.98e-12!22;UBERON:0006925!1.98e-12!22;UBERON:0009497!1.98e-12!22;UBERON:0000015!1.98e-12!22;UBERON:0002423!1.98e-12!22;UBERON:0006235!1.98e-12!22;UBERON:0008835!1.98e-12!22;UBERON:0003894!1.98e-12!22;UBERON:0004161!1.98e-12!22;UBERON:0008836!1.98e-12!22;UBERON:0004921!2.18e-12!126;UBERON:0004185!2.18e-12!126;UBERON:0002365!3.78e-12!25;UBERON:0002330!3.78e-12!25;UBERON:0001007!8.00e-12!128;UBERON:0001555!8.00e-12!128;UBERON:0007026!8.00e-12!128;UBERON:0004119!1.28e-11!130;UBERON:0000925!1.28e-11!130;UBERON:0006595!1.28e-11!130;UBERON:0000926!1.50e-09!193;UBERON:0004120!1.50e-09!193;UBERON:0006603!1.50e-09!193;UBERON:0000464!1.65e-08!57;UBERON:0002075!1.91e-08!19;UBERON:0001048!2.53e-08!147;UBERON:0002553!4.02e-07!39;UBERON:0002323!4.38e-07!37;UBERON:0004458!4.38e-07!37;UBERON:0003886!9.51e-07!38;UBERON:0005057!9.94e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0005177,5.56e-24,79;UBERON:0002100,6.10e-20,90;UBERON:0009569,1.16e-17,66;UBERON:0005172,6.63e-16,49;UBERON:0005173,6.63e-16,49;UBERON:0002417,6.63e-16,49;UBERON:0000916,6.63e-16,49;UBERON:0009854,6.81e-15,23;UBERON:0009856,6.81e-15,23;UBERON:0002107,3.96e-14,22;UBERON:0007499,3.96e-14,22;UBERON:0006925,3.96e-14,22;UBERON:0009497,3.96e-14,22;UBERON:0000015,3.96e-14,22;UBERON:0002423,3.96e-14,22;UBERON:0006235,3.96e-14,22;UBERON:0008835,3.96e-14,22;UBERON:0003894,3.96e-14,22;UBERON:0004161,3.96e-14,22;UBERON:0008836,3.96e-14,22;UBERON:0002365,1.04e-13,25;UBERON:0002330,1.04e-13,25;UBERON:0001041,7.60e-11,80;UBERON:0002075,6.43e-10,19;UBERON:0003104,3.81e-08,61;UBERON:0009142,3.81e-08,61;UBERON:0004921,8.05e-08,114;UBERON:0001007,2.46e-07,116;UBERON:0001555,2.46e-07,116;UBERON:0007026,2.46e-07,116;UBERON:0004119,3.57e-07,118;UBERON:0000925,3.57e-07,118;UBERON:0006595,3.57e-07,118|phase1_expression=0.480446541314382,0.697950815278722,0,0,0.500895729946347,0.16787927191189,0.233612640595526,0.129123323441576,0.563154888606667,0.468129052643987,0.856089841127525,0.638177271962691,0.342401459862411,0.174840804837995,10.3264026162855,7.89653542820321,7.69518065940961,0.788655413395594,0.548457734422955,0.42438965179803,0.680346321208558,0.893618560807968,0.522399578277871,0.639969691173627,0.22940928106717,0,0.430761996159075,0.430942465371778,0.950117097281869,1.26015064879965,0.886922042621219,1.27006134691926,1.23012957516914,0,2.3108129580102,1.99481574430191,2.6542016314108,0.418531630736908,0,0,0.588231488031014,0,0,1.6366586336825,1.21652317463417,0.734187008646726,0,2.61630187656536,0.659058548203415,1.36100929351998,0.55994568650145,1.43752564364972,0.335565212115473,0.725362142011344,0,0,0.85960031981627,0.515672092277442,0.404632921719196,0,0,0.677689064138264,0,0,0,0,1.49800055259202,0.384218305321555,0.933206510776299,0.945041568321835,0.630974884054146,0.571301968807607,0.662605622854841,0.979926393719632,1.43768206527355,0.919218786610021,0,0.255374676170375,0.307213066512487,0.527545150920775,0.457438218012048,0,0,0,0.30559649555362,0.589257170947335,0.427115042397309,0.559198337475902,0.075726193333184,0.604572480854284,0.869593466105033,11.185510400758,2.719885334831,17.2705021324101,21.4426217757731,10.7526452903361,4.35377702408431,0.340860645156116,0.259786004602869,0.35333957451034,0.563373679106722,0,0,0,1.73192832808971,1.01343946190039,1.01104889002957,4.22480354960522,0,0.148442139064825,1.21439728736295,2.13125834818499,0,0.452167921657868,0.470354828542819,1.0053327306374,0.247194967734374,0.289198713839823,2.65383165584962,0.808834249737046,0.883366073841574,1.45462575940567,7.45567044872489,1.75668478206928,0.41889341362691,1.78819938646014,1.07833612055328,0,1.90605340609597,0.449371918214468,0,0.376963056338593,0,0,0.41557608911912,0.162241263067758,0.81471491080253,1.24406970610093,0.505445516867349,1.26265113531884,1.30120442962704,1.37941262660084,0.720248519221397,0.150704817835715,0.816437989815934,0.896796041993948,0.843315521037559,1.81092359517311,2.58681591519411,1.51284864134255,2.11141348996739,1.97276159184817,2.22437799380478,1.74126083261083,0.823128545631774,0.995171334092466,0,1.54408744268829,2.55747149456033,0.828503090142008,0.234526059981096,0,0.710234206755631,0.983821158737019,0.462801338662135,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=108156 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=Q922D8,Q3TW74,Q8BXX7 | |||
|association_with_transcript=0bp_to_ENSMUST00000021443,NM_138745,uc007nxz.2,uc011yny.1_5end | |||
|cluster_id=chr12:77356196..77356226,+ | |||
|description=CAGE_peak_6_at_Mthfd1_5end | |||
|id=chr12:77356196..77356226,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!4.75e-19!79;UBERON:0005177!2.14e-18!85;UBERON:0009569!8.24e-16!66;UBERON:0000077!3.67e-15!97;UBERON:0001041!4.14e-15!92;UBERON:0002100!7.30e-15!98;UBERON:0003104!8.93e-15!131;UBERON:0009142!8.93e-15!131;UBERON:0005172!5.92e-14!49;UBERON:0005173!5.92e-14!49;UBERON:0002417!5.92e-14!49;UBERON:0000916!5.92e-14!49;UBERON:0009854!4.61e-13!23;UBERON:0009856!4.61e-13!23;UBERON:0002107!1.98e-12!22;UBERON:0007499!1.98e-12!22;UBERON:0006925!1.98e-12!22;UBERON:0009497!1.98e-12!22;UBERON:0000015!1.98e-12!22;UBERON:0002423!1.98e-12!22;UBERON:0006235!1.98e-12!22;UBERON:0008835!1.98e-12!22;UBERON:0003894!1.98e-12!22;UBERON:0004161!1.98e-12!22;UBERON:0008836!1.98e-12!22;UBERON:0004921!2.18e-12!126;UBERON:0004185!2.18e-12!126;UBERON:0002365!3.78e-12!25;UBERON:0002330!3.78e-12!25;UBERON:0001007!8.00e-12!128;UBERON:0001555!8.00e-12!128;UBERON:0007026!8.00e-12!128;UBERON:0004119!1.28e-11!130;UBERON:0000925!1.28e-11!130;UBERON:0006595!1.28e-11!130;UBERON:0000926!1.50e-09!193;UBERON:0004120!1.50e-09!193;UBERON:0006603!1.50e-09!193;UBERON:0000464!1.65e-08!57;UBERON:0002075!1.91e-08!19;UBERON:0001048!2.53e-08!147;UBERON:0002553!4.02e-07!39;UBERON:0002323!4.38e-07!37;UBERON:0004458!4.38e-07!37;UBERON:0003886!9.51e-07!38;UBERON:0005057!9.94e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,5.56e-24,79;UBERON:0002100,6.10e-20,90;UBERON:0009569,1.16e-17,66;UBERON:0005172,6.63e-16,49;UBERON:0005173,6.63e-16,49;UBERON:0002417,6.63e-16,49;UBERON:0000916,6.63e-16,49;UBERON:0009854,6.81e-15,23;UBERON:0009856,6.81e-15,23;UBERON:0002107,3.96e-14,22;UBERON:0007499,3.96e-14,22;UBERON:0006925,3.96e-14,22;UBERON:0009497,3.96e-14,22;UBERON:0000015,3.96e-14,22;UBERON:0002423,3.96e-14,22;UBERON:0006235,3.96e-14,22;UBERON:0008835,3.96e-14,22;UBERON:0003894,3.96e-14,22;UBERON:0004161,3.96e-14,22;UBERON:0008836,3.96e-14,22;UBERON:0002365,1.04e-13,25;UBERON:0002330,1.04e-13,25;UBERON:0001041,7.60e-11,80;UBERON:0002075,6.43e-10,19;UBERON:0003104,3.81e-08,61;UBERON:0009142,3.81e-08,61;UBERON:0004921,8.05e-08,114;UBERON:0001007,2.46e-07,116;UBERON:0001555,2.46e-07,116;UBERON:0007026,2.46e-07,116;UBERON:0004119,3.57e-07,118;UBERON:0000925,3.57e-07,118;UBERON:0006595,3.57e-07,118 | |||
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| |||
|short_description=p6@Mthfd1 | |||
}} |
Latest revision as of 19:18, 26 September 2015
Short description: | p6@Mthfd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Mthfd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000021443, NM_138745, uc007nxz.2, uc011yny.1_5end |
EntrezGene: | Mthfd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 5.56e-24 | 79 |
trunk | 6.10e-20 | 90 |
subdivision of trunk | 1.16e-17 | 66 |
abdomen element | 6.63e-16 | 49 |
abdominal segment element | 6.63e-16 | 49 |
abdominal segment of trunk | 6.63e-16 | 49 |
abdomen | 6.63e-16 | 49 |
digestive tract diverticulum | 6.81e-15 | 23 |
sac | 6.81e-15 | 23 |
liver | 3.96e-14 | 22 |
epithelial sac | 3.96e-14 | 22 |
digestive gland | 3.96e-14 | 22 |
epithelium of foregut-midgut junction | 3.96e-14 | 22 |
anatomical boundary | 3.96e-14 | 22 |
hepatobiliary system | 3.96e-14 | 22 |
foregut-midgut junction | 3.96e-14 | 22 |
hepatic diverticulum | 3.96e-14 | 22 |
liver primordium | 3.96e-14 | 22 |
septum transversum | 3.96e-14 | 22 |
liver bud | 3.96e-14 | 22 |
exocrine gland | 1.04e-13 | 25 |
exocrine system | 1.04e-13 | 25 |
foregut | 7.60e-11 | 80 |
viscus | 6.43e-10 | 19 |
mesenchyme | 3.81e-08 | 61 |
entire embryonic mesenchyme | 3.81e-08 | 61 |
subdivision of digestive tract | 8.05e-08 | 114 |
digestive system | 2.46e-07 | 116 |
digestive tract | 2.46e-07 | 116 |
primitive gut | 2.46e-07 | 116 |
endoderm-derived structure | 3.57e-07 | 118 |
endoderm | 3.57e-07 | 118 |
presumptive endoderm | 3.57e-07 | 118 |