FFCP PHASE1:Hg19::chr4:137842587..137842589,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-51bp_to_ENST00000512039_5end | |||
|cluster_id=chr4:137842587..137842589,- | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_1_at_ENST00000512039_5end | |||
|id=chr4:137842587..137842589,- | |||
|ontology_enrichment_celltype=CL:0002595!2.60e-11!5;CL:0000319!1.55e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000319;1.34e-23;1!CL:0000159;1.65e-12;2!CL:1000415;1.85e-12;2!CL:0002593;3.24e-12;2!CL:0002231;1.12e-08;3!CL:0000239;1.40e-08;3!CL:1000615;1.40e-08;3!CL:0002306;1.40e-08;3!CL:0002563;9.63e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.34e-23,1;CL:0000159,1.65e-12,2;CL:1000415,1.85e-12,2;CL:0002593,2.90e-12,2;CL:0002231,1.21e-08,3;CL:0000239,1.51e-08,3;CL:1000615,1.51e-08,3;CL:0002306,1.51e-08,3;CL:0002563,9.63e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4929!1.52e-12!2;DOID:0050687!1.07e-11!143;DOID:305!5.13e-09!106;DOID:162!5.58e-08!235;DOID:299!8.73e-08!25;DOID:14566!1.02e-07!239;DOID:3030!1.55e-07!1;DOID:3151!4.06e-07!1;DOID:3149!4.06e-07!1;DOID:3112!6.12e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3030;1.34e-23;1!DOID:4231;2.32e-12;2!DOID:1907;2.32e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.34e-23,1;DOID:4231,2.32e-12,2;DOID:1907,2.32e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0003834!2.60e-11!5;UBERON:0001533!2.60e-11!5;UBERON:0004913!3.01e-07!1;UBERON:0003703!3.01e-07!1;UBERON:0001174!3.01e-07!1;UBERON:0004914!3.01e-07!1;UBERON:0003513!3.12e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;3.24e-12;2!UBERON:0002110;9.66e-09;3!UBERON:0006853;1.40e-08;3!UBERON:0007685;1.40e-08;3!UBERON:0004134;1.40e-08;3!UBERON:0001242;9.63e-07;4!UBERON:0001262;9.63e-07;4!UBERON:0004786;9.63e-07;4!UBERON:0004808;9.63e-07;4!UBERON:0001277;9.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,2.90e-12,2;UBERON:0002110,9.66e-09,3;UBERON:0006242,9.66e-09,3;UBERON:0006853,1.51e-08,3;UBERON:0007685,1.51e-08,3;UBERON:0004134,1.51e-08,3;UBERON:0001242,9.63e-07,4;UBERON:0001262,9.63e-07,4;UBERON:0004786,9.63e-07,4;UBERON:0004808,9.63e-07,4;UBERON:0001277,9.63e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.821005894499457,0.393553906568396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01950509218015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,1.21856744815642,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0,0,0,0.137041924646751,0,0,0,3.52698809106748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86473308011902,0,0,0,0,0,2.76158925377761,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0.40341013740704,0,0,0.163771917510097,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,2.80705868584208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,52.9342307573538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000512039 | |||
}} |
Latest revision as of 01:38, 30 July 2015
Short description: | p1@ENST00000512039 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000512039_5end |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | -51bp_to_ENST00000512039_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.34e-23 | 1 |
seromucus secreting cell | 1.65e-12 | 2 |
epithelial cell of gall bladder | 1.85e-12 | 2 |
smooth muscle cell of the internal thoracic artery | 2.90e-12 | 2 |
epithelial cell of prostate | 1.21e-08 | 3 |
brush border epithelial cell | 1.51e-08 | 3 |
kidney cortex tubule cell | 1.51e-08 | 3 |
epithelial cell of proximal tubule | 1.51e-08 | 3 |
intestinal epithelial cell | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 2.90e-12 | 2 |
gallbladder | 9.66e-09 | 3 |
gall bladder primordium | 9.66e-09 | 3 |
renal cortex tubule | 1.51e-08 | 3 |
region of nephron tubule | 1.51e-08 | 3 |
proximal tubule | 1.51e-08 | 3 |
intestinal mucosa | 9.63e-07 | 4 |
wall of intestine | 9.63e-07 | 4 |
gastrointestinal system mucosa | 9.63e-07 | 4 |
gastrointestinal system epithelium | 9.63e-07 | 4 |
intestinal epithelium | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.34e-23 | 1 |
histiocytoma | 2.32e-12 | 2 |
malignant fibroxanthoma | 2.32e-12 | 2 |