FFCP PHASE1:Hg19::chrX:15682969..15682997,-: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:15682969..15682997,-
|short_description=p2@TMEM27
|description=CAGE_peak_2_at_TMEM27_5end
|association_with_transcript=156bp_to_ENST00000380342,NM_020665,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57393 | |EntrezGene=57393 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29437 | |HGNC=29437 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HBJ8 | |UniProt=Q9HBJ8 | ||
|association_with_transcript=156bp_to_ENST00000380342,NM_020665,uc004cxc.1_5end | |||
|cluster_id=chrX:15682969..15682997,- | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_2_at_TMEM27_5end | |||
|id=chrX:15682969..15682997,- | |||
|ontology_enrichment_celltype=CL:1000497!1.84e-13!18;CL:0002518!1.84e-13!18;CL:1000507!2.53e-10!12;CL:1000494!2.53e-10!12;CL:1000449!1.21e-09!16;CL:0000239!9.57e-09!3;CL:1000615!9.57e-09!3;CL:0002306!9.57e-09!3;CL:0000066!9.78e-09!254;CL:0000181!8.38e-08!12;CL:0000417!8.38e-08!12;CL:0000668!8.38e-08!12;CL:0000414!8.38e-08!12;CL:0000412!8.38e-08!12;CL:0000182!8.38e-08!12;CL:0002681!6.52e-07!13;CL:0002584!6.52e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.31e-13;17!CL:0002518;1.31e-13;17!CL:1000507;1.09e-10;10!CL:1000494;1.09e-10;10!CL:0000182;2.10e-09;12!CL:0000313;8.98e-08;1!CL:1000449;3.61e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.23e-13,17;CL:0002518,1.23e-13,17;CL:1000507,1.01e-10,10;CL:1000494,1.01e-10,10;CL:0000182,2.08e-09,12;CL:0000313,9.29e-08,1;CL:1000449,3.44e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.23e-11;10!UBERON:0007687;2.23e-11;10!UBERON:0003104;1.28e-07;31 | |||
|ontology_enrichment_disease=DOID:305!1.03e-09!106;DOID:4556!3.97e-08!3 | |||
|ontology_enrichment_disease_v019=DOID:2152;8.98e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,9.29e-08,1 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0005172,6.46e-22,54;UBERON:0005173,6.46e-22,54;UBERON:0002113,1.43e-19,26;UBERON:0003918,1.43e-19,26;UBERON:0011143,1.43e-19,26;UBERON:0005095,1.43e-19,26;UBERON:0007687,1.43e-19,26;UBERON:0002417,1.89e-19,60;UBERON:0000916,1.89e-19,60;UBERON:0000489,3.46e-16,31;UBERON:0005177,8.10e-16,101;UBERON:0006554,1.20e-12,47;UBERON:0001008,2.38e-12,48;UBERON:0009569,3.37e-12,112;UBERON:0008835,8.45e-11,22;UBERON:0003894,8.45e-11,22;UBERON:0004810,1.01e-10,10;UBERON:0009854,2.63e-10,23;UBERON:0006555,3.93e-10,16;UBERON:0004819,3.93e-10,16;UBERON:0002114,8.21e-10,2;UBERON:0001896,1.34e-09,3;UBERON:0005290,1.34e-09,3;UBERON:0010096,1.34e-09,3;UBERON:0007499,1.95e-09,25;UBERON:0009497,1.95e-09,25;UBERON:0000015,1.95e-09,25;UBERON:0002423,1.95e-09,25;UBERON:0006235,1.95e-09,25;UBERON:0004161,1.95e-09,25;UBERON:0009856,4.73e-09,26;UBERON:0002107,5.77e-09,19;UBERON:0006925,5.77e-09,19;UBERON:0008836,5.77e-09,19;UBERON:0002100,2.01e-08,199;UBERON:0004913,4.40e-08,1;UBERON:0003703,4.40e-08,1;UBERON:0001174,4.40e-08,1;UBERON:0004914,4.40e-08,1;UBERON:0001301,5.79e-08,1;UBERON:0004911,9.29e-08,1;UBERON:0003104,1.09e-07,160;UBERON:0009142,1.09e-07,160;UBERON:0004211,3.44e-07,15;UBERON:0009773,3.44e-07,15;UBERON:0001231,3.44e-07,15;UBERON:0001285,3.44e-07,15;UBERON:0007684,3.44e-07,15;UBERON:0004208,3.44e-07,15;UBERON:0003929,5.96e-07,54 | |||
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| ||
|short_description=p2@TMEM27 | |||
}} | }} |
Latest revision as of 05:12, 20 September 2015
Short description: | p2@TMEM27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMEM27_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 156bp_to_ENST00000380342, NM_020665, uc004cxc.1_5end |
EntrezGene: | TMEM27 |
HGNC: | 29437 |
UniProt: | Q9HBJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.23e-13 | 17 |
kidney epithelial cell | 1.23e-13 | 17 |
kidney tubule cell | 1.01e-10 | 10 |
nephron tubule epithelial cell | 1.01e-10 | 10 |
hepatocyte | 2.08e-09 | 12 |
serous secreting cell | 9.29e-08 | 1 |
epithelial cell of nephron | 3.44e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 9.29e-08 | 1 |