FFCP PHASE1:Mm9::chr2:14310061..14310078,+: Difference between revisions
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{{FFCP|EntrezGene=277468|HGNC=|MCL_coexpression_id=20|UniProt=Q5FWH7|association_with_transcript=36bp_to_ENSMUST00000082290,ENSMUST00000170198,NM_001012305,uc008ikl.2_5end|description=CAGE_peak_2_at_Slc39a12_5end|id=chr2:14310061..14310078,+|ontology_enrichment_celltype=CL:0000117!1.10e-10!23;CL:0000337!1.10e-10!23;CL:0002319!4.76e-10!43;CL:0000221!1.14e-09!44;CL:0000133!1.14e-09!44;CL:0000055!9.69e-08!50;CL:0002453!1.78e-07!8|ontology_enrichment_celltype_v019_2=CL:0002319,6.16e-09,43;CL:0002610,1.02e-08,3;CL:0000221,1.17e-08,44;CL:0000133,1.17e-08,44;CL:0000117,1.39e-08,23;CL:0000337,1.39e-08,23;CL:0002614,2.36e-08,3;CL:0002453,8.14e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.03e-35!73;UBERON:0005743!9.03e-35!73;UBERON:0000073!1.99e-33!75;UBERON:0001016!1.99e-33!75;UBERON:0001049!4.44e-32!52;UBERON:0005068!4.44e-32!52;UBERON:0006241!4.44e-32!52;UBERON:0007135!4.44e-32!52;UBERON:0000955!1.01e-30!50;UBERON:0006238!1.01e-30!50;UBERON:0000033!1.76e-30!63;UBERON:0004121!9.15e-30!102;UBERON:0000924!9.15e-30!102;UBERON:0006601!9.15e-30!102;UBERON:0002616!1.27e-29!49;UBERON:0002346!2.78e-29!71;UBERON:0003075!2.78e-29!71;UBERON:0007284!2.78e-29!71;UBERON:0002020!7.14e-24!34;UBERON:0003056!1.67e-23!49;UBERON:0003080!7.45e-21!40;UBERON:0002780!1.28e-19!39;UBERON:0001890!1.28e-19!39;UBERON:0006240!1.28e-19!39;UBERON:0002791!5.37e-19!29;UBERON:0003528!5.37e-19!29;UBERON:0001893!5.37e-19!29;UBERON:0007811!1.16e-18!86;UBERON:0000153!6.09e-16!94;UBERON:0002619!6.90e-15!17;UBERON:0000956!4.64e-13!21;UBERON:0001869!4.64e-13!21;UBERON:0000203!4.64e-13!21;UBERON:0002021!3.76e-12!10;UBERON:0000411!3.76e-12!10;UBERON:0001950!3.76e-12!10;UBERON:0003076!6.92e-12!12;UBERON:0003057!6.92e-12!12;UBERON:0002298!2.20e-09!6;UBERON:0000025!1.27e-08!114;UBERON:0002240!1.48e-07!6;UBERON:0005174!1.48e-07!6;UBERON:0001137!1.48e-07!6;UBERON:0004111!2.44e-07!122;UBERON:0002420!3.45e-07!8;UBERON:0007245!3.45e-07!8;UBERON:0010009!3.45e-07!8;UBERON:0010011!3.45e-07!8;UBERON:0000454!3.45e-07!8;UBERON:0002950!8.04e-07!4;UBERON:0001891!8.04e-07!4;UBERON:0009616!8.04e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.29e-43,54;UBERON:0001017,3.73e-39,73;UBERON:0001049,4.69e-39,52;UBERON:0005068,4.69e-39,52;UBERON:0006241,4.69e-39,52;UBERON:0007135,4.69e-39,52;UBERON:0001016,6.60e-38,75;UBERON:0000955,1.15e-32,47;UBERON:0006238,1.15e-32,47;UBERON:0002616,5.37e-31,46;UBERON:0002346,2.16e-30,64;UBERON:0003075,2.16e-30,64;UBERON:0007284,2.16e-30,64;UBERON:0004121,2.59e-28,95;UBERON:0000924,2.59e-28,95;UBERON:0006601,2.59e-28,95;UBERON:0002020,1.90e-27,34;UBERON:0010371,9.22e-26,73;UBERON:0003080,3.60e-23,40;UBERON:0003528,8.54e-22,29;UBERON:0002791,8.54e-22,29;UBERON:0001893,8.54e-22,29;UBERON:0002780,2.50e-21,39;UBERON:0001890,2.50e-21,39;UBERON:0006240,2.50e-21,39;UBERON:0002619,1.10e-19,17;UBERON:0010314,5.90e-19,92;UBERON:0000956,4.17e-18,21;UBERON:0001869,4.17e-18,21;UBERON:0000203,4.17e-18,21;UBERON:0003056,6.26e-18,49;UBERON:0003076,4.07e-17,12;UBERON:0003057,4.07e-17,12;UBERON:0002021,1.84e-16,10;UBERON:0000411,1.84e-16,10;UBERON:0001950,1.84e-16,10;UBERON:0000025,6.60e-14,114;UBERON:0004111,1.60e-12,122;UBERON:0002950,9.82e-11,4;UBERON:0001891,9.82e-11,4;UBERON:0009616,9.82e-11,4;UBERON:0010286,9.82e-11,4;UBERON:0011216,7.68e-10,194;UBERON:0004733,1.70e-09,6;UBERON:0004732,1.70e-09,6;UBERON:0002028,1.70e-09,6;UBERON:0007277,1.70e-09,6;UBERON:0002240,3.91e-09,6;UBERON:0005174,3.91e-09,6;UBERON:0001137,3.91e-09,6;UBERON:0004684,1.02e-08,3;UBERON:0002275,1.02e-08,3;UBERON:0002038,2.36e-08,3;UBERON:0009663,2.36e-08,3;UBERON:0009661,2.36e-08,3;UBERON:0000125,2.36e-08,3;UBERON:0002308,2.36e-08,3;UBERON:0001948,6.20e-07,5;UBERON:0002315,6.20e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,6.59058548203415,6.80504646759992,0.979904951377538,2.87505128729943,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.599200221036809,1.92109152660777,0,0,0,1.71390590642282,1.76694832761291,0.244981598429908,0,0,17.6185409599022,7.91661496128164,7.68032666281217,0.527545150920775,0.0914876436024097,0,7.81712397203867,7.31591393041184,6.57032465440283,2.35702868378934,2.98980529678116,0.186399445825301,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,2.34224637609238,4.81727425670947,0,0,0,0,8.68785708547972,4.11750542536764,0.251308704225729,4.86708096538374,3.06858548796397,7.48036960414416,4.54275536589721,0.101839363850316,0,0,0.420883711772948,0,0,0.180062129805349,0.60281927134286,0.612328492361951,0.2562274405697,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.67782861123144,1.02904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06422595946285,7.03270119553219,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=277468 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=Q5FWH7 | |||
|association_with_transcript=36bp_to_ENSMUST00000082290,ENSMUST00000170198,NM_001012305,uc008ikl.2_5end | |||
|cluster_id=chr2:14310061..14310078,+ | |||
|description=CAGE_peak_2_at_Slc39a12_5end | |||
|id=chr2:14310061..14310078,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.10e-10!23;CL:0000337!1.10e-10!23;CL:0002319!4.76e-10!43;CL:0000221!1.14e-09!44;CL:0000133!1.14e-09!44;CL:0000055!9.69e-08!50;CL:0002453!1.78e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.16e-09,43;CL:0002610,1.02e-08,3;CL:0000221,1.17e-08,44;CL:0000133,1.17e-08,44;CL:0000117,1.39e-08,23;CL:0000337,1.39e-08,23;CL:0002614,2.36e-08,3;CL:0002453,8.14e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.03e-35!73;UBERON:0005743!9.03e-35!73;UBERON:0000073!1.99e-33!75;UBERON:0001016!1.99e-33!75;UBERON:0001049!4.44e-32!52;UBERON:0005068!4.44e-32!52;UBERON:0006241!4.44e-32!52;UBERON:0007135!4.44e-32!52;UBERON:0000955!1.01e-30!50;UBERON:0006238!1.01e-30!50;UBERON:0000033!1.76e-30!63;UBERON:0004121!9.15e-30!102;UBERON:0000924!9.15e-30!102;UBERON:0006601!9.15e-30!102;UBERON:0002616!1.27e-29!49;UBERON:0002346!2.78e-29!71;UBERON:0003075!2.78e-29!71;UBERON:0007284!2.78e-29!71;UBERON:0002020!7.14e-24!34;UBERON:0003056!1.67e-23!49;UBERON:0003080!7.45e-21!40;UBERON:0002780!1.28e-19!39;UBERON:0001890!1.28e-19!39;UBERON:0006240!1.28e-19!39;UBERON:0002791!5.37e-19!29;UBERON:0003528!5.37e-19!29;UBERON:0001893!5.37e-19!29;UBERON:0007811!1.16e-18!86;UBERON:0000153!6.09e-16!94;UBERON:0002619!6.90e-15!17;UBERON:0000956!4.64e-13!21;UBERON:0001869!4.64e-13!21;UBERON:0000203!4.64e-13!21;UBERON:0002021!3.76e-12!10;UBERON:0000411!3.76e-12!10;UBERON:0001950!3.76e-12!10;UBERON:0003076!6.92e-12!12;UBERON:0003057!6.92e-12!12;UBERON:0002298!2.20e-09!6;UBERON:0000025!1.27e-08!114;UBERON:0002240!1.48e-07!6;UBERON:0005174!1.48e-07!6;UBERON:0001137!1.48e-07!6;UBERON:0004111!2.44e-07!122;UBERON:0002420!3.45e-07!8;UBERON:0007245!3.45e-07!8;UBERON:0010009!3.45e-07!8;UBERON:0010011!3.45e-07!8;UBERON:0000454!3.45e-07!8;UBERON:0002950!8.04e-07!4;UBERON:0001891!8.04e-07!4;UBERON:0009616!8.04e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.29e-43,54;UBERON:0001017,3.73e-39,73;UBERON:0001049,4.69e-39,52;UBERON:0005068,4.69e-39,52;UBERON:0006241,4.69e-39,52;UBERON:0007135,4.69e-39,52;UBERON:0001016,6.60e-38,75;UBERON:0000955,1.15e-32,47;UBERON:0006238,1.15e-32,47;UBERON:0002616,5.37e-31,46;UBERON:0002346,2.16e-30,64;UBERON:0003075,2.16e-30,64;UBERON:0007284,2.16e-30,64;UBERON:0004121,2.59e-28,95;UBERON:0000924,2.59e-28,95;UBERON:0006601,2.59e-28,95;UBERON:0002020,1.90e-27,34;UBERON:0010371,9.22e-26,73;UBERON:0003080,3.60e-23,40;UBERON:0003528,8.54e-22,29;UBERON:0002791,8.54e-22,29;UBERON:0001893,8.54e-22,29;UBERON:0002780,2.50e-21,39;UBERON:0001890,2.50e-21,39;UBERON:0006240,2.50e-21,39;UBERON:0002619,1.10e-19,17;UBERON:0010314,5.90e-19,92;UBERON:0000956,4.17e-18,21;UBERON:0001869,4.17e-18,21;UBERON:0000203,4.17e-18,21;UBERON:0003056,6.26e-18,49;UBERON:0003076,4.07e-17,12;UBERON:0003057,4.07e-17,12;UBERON:0002021,1.84e-16,10;UBERON:0000411,1.84e-16,10;UBERON:0001950,1.84e-16,10;UBERON:0000025,6.60e-14,114;UBERON:0004111,1.60e-12,122;UBERON:0002950,9.82e-11,4;UBERON:0001891,9.82e-11,4;UBERON:0009616,9.82e-11,4;UBERON:0010286,9.82e-11,4;UBERON:0011216,7.68e-10,194;UBERON:0004733,1.70e-09,6;UBERON:0004732,1.70e-09,6;UBERON:0002028,1.70e-09,6;UBERON:0007277,1.70e-09,6;UBERON:0002240,3.91e-09,6;UBERON:0005174,3.91e-09,6;UBERON:0001137,3.91e-09,6;UBERON:0004684,1.02e-08,3;UBERON:0002275,1.02e-08,3;UBERON:0002038,2.36e-08,3;UBERON:0009663,2.36e-08,3;UBERON:0009661,2.36e-08,3;UBERON:0000125,2.36e-08,3;UBERON:0002308,2.36e-08,3;UBERON:0001948,6.20e-07,5;UBERON:0002315,6.20e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,6.59058548203415,6.80504646759992,0.979904951377538,2.87505128729943,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.599200221036809,1.92109152660777,0,0,0,1.71390590642282,1.76694832761291,0.244981598429908,0,0,17.6185409599022,7.91661496128164,7.68032666281217,0.527545150920775,0.0914876436024097,0,7.81712397203867,7.31591393041184,6.57032465440283,2.35702868378934,2.98980529678116,0.186399445825301,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,2.34224637609238,4.81727425670947,0,0,0,0,8.68785708547972,4.11750542536764,0.251308704225729,4.86708096538374,3.06858548796397,7.48036960414416,4.54275536589721,0.101839363850316,0,0,0.420883711772948,0,0,0.180062129805349,0.60281927134286,0.612328492361951,0.2562274405697,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.67782861123144,1.02904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06422595946285,7.03270119553219,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0.177340233642274,0,0.329098041204242,0,0,0,0,0,0.161464426695906,0,0,0,0,10.7546675166096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,5.06357760157895,4.01026859407578,4.46818274093588,4.11049511862385,4.5323633843382,4.05013500139084,0.900642406448441,1.81256963593682,1.55328093525546,0,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0.476293691283074,0.115884325944855,0,0.412085900803307,0,0,0,0,0.290692833264657,0,0,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0,0,0.499621155875892,0,0.214871054048298,0,0.220591419119515,0.463735671240843 | |||
|short_description=p2@Slc39a12 | |||
}} |
Latest revision as of 20:12, 25 September 2015
Short description: | p2@Slc39a12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc39a12_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 36bp_to_ENSMUST00000082290, ENSMUST00000170198, NM_001012305, uc008ikl.2_5end |
EntrezGene: | Slc39a12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.16e-09 | 43 |
raphe nuclei neuron | 1.02e-08 | 3 |
ectodermal cell | 1.17e-08 | 44 |
neurectodermal cell | 1.17e-08 | 44 |
CNS neuron (sensu Vertebrata) | 1.39e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.39e-08 | 23 |
neuron of the substantia nigra | 2.36e-08 | 3 |
oligodendrocyte precursor cell | 8.14e-07 | 8 |