FFCP PHASE1:Mm9::chr2:148558104..148558108,-: Difference between revisions
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{{FFCP|EntrezGene=17957|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=18bp_to_ENSMUST00000140647_5end|description=CAGE_peak_3_at_Napb_5end|id=chr2:148558104..148558108,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,1.33e-11,3;CL:0002614,3.02e-11,3;CL:0000117,9.21e-07,23;CL:0000337,9.21e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.17e-20!71;UBERON:0003075!1.17e-20!71;UBERON:0007284!1.17e-20!71;UBERON:0000955!4.89e-20!50;UBERON:0006238!4.89e-20!50;UBERON:0000073!1.93e-19!75;UBERON:0001016!1.93e-19!75;UBERON:0004121!2.20e-19!102;UBERON:0000924!2.20e-19!102;UBERON:0006601!2.20e-19!102;UBERON:0000033!2.48e-19!63;UBERON:0001017!2.81e-19!73;UBERON:0005743!2.81e-19!73;UBERON:0002616!6.82e-19!49;UBERON:0001049!3.14e-18!52;UBERON:0005068!3.14e-18!52;UBERON:0006241!3.14e-18!52;UBERON:0007135!3.14e-18!52;UBERON:0003056!1.72e-14!49;UBERON:0002020!2.92e-13!34;UBERON:0003080!4.45e-13!40;UBERON:0002791!4.34e-12!29;UBERON:0003528!4.34e-12!29;UBERON:0001893!4.34e-12!29;UBERON:0002780!4.46e-12!39;UBERON:0001890!4.46e-12!39;UBERON:0006240!4.46e-12!39;UBERON:0007811!9.59e-12!86;UBERON:0000153!1.46e-10!94;UBERON:0002021!5.05e-10!10;UBERON:0000411!5.05e-10!10;UBERON:0001950!5.05e-10!10;UBERON:0002298!5.68e-09!6;UBERON:0002619!1.70e-07!17;UBERON:0002420!2.65e-07!8;UBERON:0007245!2.65e-07!8;UBERON:0010009!2.65e-07!8;UBERON:0010011!2.65e-07!8;UBERON:0000454!2.65e-07!8;UBERON:0000956!8.60e-07!21;UBERON:0001869!8.60e-07!21;UBERON:0000203!8.60e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.22e-25,54;UBERON:0000955,3.42e-24,47;UBERON:0006238,3.42e-24,47;UBERON:0001017,1.75e-22,73;UBERON:0002616,7.44e-22,46;UBERON:0001016,8.81e-22,75;UBERON:0001049,1.61e-21,52;UBERON:0005068,1.61e-21,52;UBERON:0006241,1.61e-21,52;UBERON:0007135,1.61e-21,52;UBERON:0002346,7.76e-19,64;UBERON:0003075,7.76e-19,64;UBERON:0007284,7.76e-19,64;UBERON:0004121,4.51e-18,95;UBERON:0000924,4.51e-18,95;UBERON:0006601,4.51e-18,95;UBERON:0003080,4.54e-17,40;UBERON:0010371,4.60e-16,73;UBERON:0003056,2.04e-15,49;UBERON:0003528,2.93e-15,29;UBERON:0002791,2.93e-15,29;UBERON:0001893,2.93e-15,29;UBERON:0002780,5.30e-15,39;UBERON:0001890,5.30e-15,39;UBERON:0006240,5.30e-15,39;UBERON:0002950,7.22e-15,4;UBERON:0001891,7.22e-15,4;UBERON:0009616,7.22e-15,4;UBERON:0010286,7.22e-15,4;UBERON:0002020,1.06e-12,34;UBERON:0002021,2.71e-12,10;UBERON:0000411,2.71e-12,10;UBERON:0001950,2.71e-12,10;UBERON:0010314,5.54e-12,92;UBERON:0004684,1.33e-11,3;UBERON:0002275,1.33e-11,3;UBERON:0002038,3.02e-11,3;UBERON:0009663,3.02e-11,3;UBERON:0009661,3.02e-11,3;UBERON:0000125,3.02e-11,3;UBERON:0002308,3.02e-11,3;UBERON:0000956,1.18e-09,21;UBERON:0001869,1.18e-09,21;UBERON:0000203,1.18e-09,21;UBERON:0002619,2.60e-09,17;UBERON:0001896,8.30e-09,2;UBERON:0002298,8.30e-09,2;UBERON:0005290,8.30e-09,2;UBERON:0010096,8.30e-09,2;UBERON:0000025,7.10e-08,114;UBERON:0002420,3.96e-07,8;UBERON:0007245,3.96e-07,8;UBERON:0010009,3.96e-07,8;UBERON:0010011,3.96e-07,8;UBERON:0000454,3.96e-07,8;UBERON:0004111,4.02e-07,122;UBERON:0007023,9.52e-07,51|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0,0,2.20231761998777,1.65993539510744,1.68967186581868,0,0.182975287204819,1.04182674111352,2.23346399201105,1.12552522006336,1.5279824777681,0,0.996601765593721,0.186399445825301,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,1.46390398505774,0.41889341362691,0,0,0,0,3.59497534571574,0.915001205637253,0.376963056338593,1.73824320192276,1.79000820131231,1.87009240103604,0.648965052271031,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0.136072998302656,0,0.281105173679186,1.29351685369508,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0.308713837137853,0,0,0,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,2.72936002979246,2.93029216480508,0,0,0,0,0.430846795465598,0,0,0,0,0.292255857911312,0.790575555893047,4.4984984299053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0,0.178368817602071,0,0,0,0,0.441056796109924,0,0,0.0603129249281559,0,0,0,3.70850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0.26175594198403,0,0,0,0.149516546043979,0.330916980914195,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,1.6942555278512,2.30162618253588,1.14579102687879,0.515559547031063,0,0.755393897389701,1.35004500046361,0.45032120322422,1.35942722695261,1.55328093525546,0.207574695168353,0,0.170733605754134,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0,0.192075457214608,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0.409231043169689,0.154936841185966,0,0,0,0,0,0,0|short_description=p3@Napb}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17957 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=18bp_to_ENSMUST00000140647_5end | |||
|cluster_id=chr2:148558104..148558108,- | |||
|description=CAGE_peak_3_at_Napb_5end | |||
|id=chr2:148558104..148558108,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.33e-11,3;CL:0002614,3.02e-11,3;CL:0000117,9.21e-07,23;CL:0000337,9.21e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.17e-20!71;UBERON:0003075!1.17e-20!71;UBERON:0007284!1.17e-20!71;UBERON:0000955!4.89e-20!50;UBERON:0006238!4.89e-20!50;UBERON:0000073!1.93e-19!75;UBERON:0001016!1.93e-19!75;UBERON:0004121!2.20e-19!102;UBERON:0000924!2.20e-19!102;UBERON:0006601!2.20e-19!102;UBERON:0000033!2.48e-19!63;UBERON:0001017!2.81e-19!73;UBERON:0005743!2.81e-19!73;UBERON:0002616!6.82e-19!49;UBERON:0001049!3.14e-18!52;UBERON:0005068!3.14e-18!52;UBERON:0006241!3.14e-18!52;UBERON:0007135!3.14e-18!52;UBERON:0003056!1.72e-14!49;UBERON:0002020!2.92e-13!34;UBERON:0003080!4.45e-13!40;UBERON:0002791!4.34e-12!29;UBERON:0003528!4.34e-12!29;UBERON:0001893!4.34e-12!29;UBERON:0002780!4.46e-12!39;UBERON:0001890!4.46e-12!39;UBERON:0006240!4.46e-12!39;UBERON:0007811!9.59e-12!86;UBERON:0000153!1.46e-10!94;UBERON:0002021!5.05e-10!10;UBERON:0000411!5.05e-10!10;UBERON:0001950!5.05e-10!10;UBERON:0002298!5.68e-09!6;UBERON:0002619!1.70e-07!17;UBERON:0002420!2.65e-07!8;UBERON:0007245!2.65e-07!8;UBERON:0010009!2.65e-07!8;UBERON:0010011!2.65e-07!8;UBERON:0000454!2.65e-07!8;UBERON:0000956!8.60e-07!21;UBERON:0001869!8.60e-07!21;UBERON:0000203!8.60e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.22e-25,54;UBERON:0000955,3.42e-24,47;UBERON:0006238,3.42e-24,47;UBERON:0001017,1.75e-22,73;UBERON:0002616,7.44e-22,46;UBERON:0001016,8.81e-22,75;UBERON:0001049,1.61e-21,52;UBERON:0005068,1.61e-21,52;UBERON:0006241,1.61e-21,52;UBERON:0007135,1.61e-21,52;UBERON:0002346,7.76e-19,64;UBERON:0003075,7.76e-19,64;UBERON:0007284,7.76e-19,64;UBERON:0004121,4.51e-18,95;UBERON:0000924,4.51e-18,95;UBERON:0006601,4.51e-18,95;UBERON:0003080,4.54e-17,40;UBERON:0010371,4.60e-16,73;UBERON:0003056,2.04e-15,49;UBERON:0003528,2.93e-15,29;UBERON:0002791,2.93e-15,29;UBERON:0001893,2.93e-15,29;UBERON:0002780,5.30e-15,39;UBERON:0001890,5.30e-15,39;UBERON:0006240,5.30e-15,39;UBERON:0002950,7.22e-15,4;UBERON:0001891,7.22e-15,4;UBERON:0009616,7.22e-15,4;UBERON:0010286,7.22e-15,4;UBERON:0002020,1.06e-12,34;UBERON:0002021,2.71e-12,10;UBERON:0000411,2.71e-12,10;UBERON:0001950,2.71e-12,10;UBERON:0010314,5.54e-12,92;UBERON:0004684,1.33e-11,3;UBERON:0002275,1.33e-11,3;UBERON:0002038,3.02e-11,3;UBERON:0009663,3.02e-11,3;UBERON:0009661,3.02e-11,3;UBERON:0000125,3.02e-11,3;UBERON:0002308,3.02e-11,3;UBERON:0000956,1.18e-09,21;UBERON:0001869,1.18e-09,21;UBERON:0000203,1.18e-09,21;UBERON:0002619,2.60e-09,17;UBERON:0001896,8.30e-09,2;UBERON:0002298,8.30e-09,2;UBERON:0005290,8.30e-09,2;UBERON:0010096,8.30e-09,2;UBERON:0000025,7.10e-08,114;UBERON:0002420,3.96e-07,8;UBERON:0007245,3.96e-07,8;UBERON:0010009,3.96e-07,8;UBERON:0010011,3.96e-07,8;UBERON:0000454,3.96e-07,8;UBERON:0004111,4.02e-07,122;UBERON:0007023,9.52e-07,51 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0,0,2.20231761998777,1.65993539510744,1.68967186581868,0,0.182975287204819,1.04182674111352,2.23346399201105,1.12552522006336,1.5279824777681,0,0.996601765593721,0.186399445825301,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,1.46390398505774,0.41889341362691,0,0,0,0,3.59497534571574,0.915001205637253,0.376963056338593,1.73824320192276,1.79000820131231,1.87009240103604,0.648965052271031,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0.136072998302656,0,0.281105173679186,1.29351685369508,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0.308713837137853,0,0,0,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,2.72936002979246,2.93029216480508,0,0,0,0,0.430846795465598,0,0,0,0,0.292255857911312,0.790575555893047,4.4984984299053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0,0.178368817602071,0,0,0,0,0.441056796109924,0,0,0.0603129249281559,0,0,0,3.70850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0.26175594198403,0,0,0,0.149516546043979,0.330916980914195,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,1.6942555278512,2.30162618253588,1.14579102687879,0.515559547031063,0,0.755393897389701,1.35004500046361,0.45032120322422,1.35942722695261,1.55328093525546,0.207574695168353,0,0.170733605754134,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0,0.192075457214608,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0.409231043169689,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p3@Napb | |||
}} |
Latest revision as of 21:06, 25 September 2015
Short description: | p3@Napb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Napb_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 18bp_to_ENSMUST00000140647_5end |
EntrezGene: | Napb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.33e-11 | 3 |
neuron of the substantia nigra | 3.02e-11 | 3 |
CNS neuron (sensu Vertebrata) | 9.21e-07 | 23 |
neuroblast (sensu Vertebrata) | 9.21e-07 | 23 |