FFCP PHASE1:Mm9::chr3:88897280..88897289,-: Difference between revisions
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{{FFCP|EntrezGene=72296|HGNC=|MCL_coexpression_id=1|UniProt=Q8BG26|association_with_transcript=0bp_to_ENSMUST00000052539,ENSMUST00000090929,NM_001083807,NM_028188,uc008pxm.1,uc008pxn.1_5end|description=CAGE_peak_3_at_Rusc1_5end|id=chr3:88897280..88897289,-|ontology_enrichment_celltype=CL:0000117!1.96e-21!23;CL:0000337!1.96e-21!23;CL:0000540!2.28e-14!33;CL:0000047!2.28e-14!33;CL:0000031!2.28e-14!33;CL:0000404!2.28e-14!33;CL:0000221!1.92e-11!44;CL:0000133!1.92e-11!44;CL:0002319!3.49e-11!43;CL:0000393!1.01e-10!39;CL:0000211!1.01e-10!39;CL:0000055!2.65e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.22e-38,23;CL:0000337,1.22e-38,23;CL:0000540,3.68e-25,33;CL:0000047,3.68e-25,33;CL:0000031,3.68e-25,33;CL:0000404,3.68e-25,33;CL:0000393,2.11e-20,39;CL:0000211,2.11e-20,39;CL:0002319,5.69e-18,43;CL:0000221,1.96e-17,44;CL:0000133,1.96e-17,44;CL:0002321,6.49e-09,70;CL:0002610,1.06e-07,3;CL:0002614,1.06e-07,3;CL:0002609,3.25e-07,6;CL:0002613,8.57e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.65e-31!52;UBERON:0005068!1.65e-31!52;UBERON:0006241!1.65e-31!52;UBERON:0007135!1.65e-31!52;UBERON:0002346!2.18e-30!71;UBERON:0003075!2.18e-30!71;UBERON:0007284!2.18e-30!71;UBERON:0001017!8.76e-30!73;UBERON:0005743!8.76e-30!73;UBERON:0000955!1.02e-29!50;UBERON:0006238!1.02e-29!50;UBERON:0000073!2.21e-29!75;UBERON:0001016!2.21e-29!75;UBERON:0002616!9.11e-29!49;UBERON:0002020!1.17e-28!34;UBERON:0004121!7.77e-26!102;UBERON:0000924!7.77e-26!102;UBERON:0006601!7.77e-26!102;UBERON:0000033!1.03e-25!63;UBERON:0003080!4.05e-24!40;UBERON:0002791!7.11e-24!29;UBERON:0003528!7.11e-24!29;UBERON:0001893!7.11e-24!29;UBERON:0002780!3.09e-23!39;UBERON:0001890!3.09e-23!39;UBERON:0006240!3.09e-23!39;UBERON:0003056!5.84e-22!49;UBERON:0000956!1.05e-16!21;UBERON:0001869!1.05e-16!21;UBERON:0000203!1.05e-16!21;UBERON:0007811!3.80e-14!86;UBERON:0002619!1.01e-13!17;UBERON:0000153!5.40e-13!94;UBERON:0002021!1.31e-09!10;UBERON:0000411!1.31e-09!10;UBERON:0001950!1.31e-09!10;UBERON:0002420!2.75e-08!8;UBERON:0007245!2.75e-08!8;UBERON:0010009!2.75e-08!8;UBERON:0010011!2.75e-08!8;UBERON:0000454!2.75e-08!8;UBERON:0003076!1.05e-07!12;UBERON:0003057!1.05e-07!12;UBERON:0002298!2.51e-07!6;UBERON:0002240!5.95e-07!6;UBERON:0005174!5.95e-07!6;UBERON:0001137!5.95e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.07e-49,54;UBERON:0001017,5.83e-46,73;UBERON:0002020,9.82e-46,34;UBERON:0001049,2.29e-45,52;UBERON:0005068,2.29e-45,52;UBERON:0006241,2.29e-45,52;UBERON:0007135,2.29e-45,52;UBERON:0001016,1.73e-44,75;UBERON:0003528,2.49e-36,29;UBERON:0002791,2.49e-36,29;UBERON:0001893,2.49e-36,29;UBERON:0000955,3.72e-36,47;UBERON:0006238,3.72e-36,47;UBERON:0002346,3.07e-35,64;UBERON:0003075,3.07e-35,64;UBERON:0007284,3.07e-35,64;UBERON:0002616,1.84e-34,46;UBERON:0004121,3.55e-33,95;UBERON:0000924,3.55e-33,95;UBERON:0006601,3.55e-33,95;UBERON:0003080,5.59e-32,40;UBERON:0002780,2.32e-30,39;UBERON:0001890,2.32e-30,39;UBERON:0006240,2.32e-30,39;UBERON:0010371,7.94e-30,73;UBERON:0000956,6.39e-25,21;UBERON:0001869,6.39e-25,21;UBERON:0000203,6.39e-25,21;UBERON:0003056,8.19e-25,49;UBERON:0010314,7.12e-22,92;UBERON:0002619,9.97e-22,17;UBERON:0002021,6.78e-18,10;UBERON:0000411,6.78e-18,10;UBERON:0001950,6.78e-18,10;UBERON:0000025,5.61e-16,114;UBERON:0004111,2.32e-14,122;UBERON:0003076,4.33e-13,12;UBERON:0003057,4.33e-13,12;UBERON:0002240,1.63e-12,6;UBERON:0005174,1.63e-12,6;UBERON:0001137,1.63e-12,6;UBERON:0002420,2.97e-12,8;UBERON:0007245,2.97e-12,8;UBERON:0010009,2.97e-12,8;UBERON:0010011,2.97e-12,8;UBERON:0000454,2.97e-12,8;UBERON:0011216,2.06e-11,194;UBERON:0001948,2.15e-10,5;UBERON:0002315,2.15e-10,5;UBERON:0002950,2.51e-09,4;UBERON:0001891,2.51e-09,4;UBERON:0009616,2.51e-09,4;UBERON:0010286,2.51e-09,4;UBERON:0002038,1.06e-07,3;UBERON:0009663,1.06e-07,3;UBERON:0009661,1.06e-07,3;UBERON:0000125,1.06e-07,3;UBERON:0002308,1.06e-07,3;UBERON:0004684,1.06e-07,3;UBERON:0002275,1.06e-07,3;UBERON:0000483,1.67e-07,174;UBERON:0000119,2.53e-07,176|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,1.82084814773638,3.70293685490423,1.90149421051854,0,0,0,0,0,0,0,1.8664130215526,0.945041568321835,1.47227472945967,3.14216082844184,2.87129103237098,1.10241719293459,1.53352753629178,1.83843757322004,4.40463523997555,3.57524546638526,4.14737639791857,2.2420668914133,2.19570344645783,4.16730696445408,6.42120897703176,3.93933827022176,3.20876320331301,1.47314292736834,2.56269025438385,3.91438836233131,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,2.34224637609238,0.209446706813455,0,0,0,0,2.39665023047716,0.457500602818626,1.25654352112864,2.25971616249959,3.3243009452943,2.70124457927428,2.43361894601636,0,0,0,0,0,0,0.360124259610698,0,0.544291993210623,0.2562274405697,0.187403449119458,0,0,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,1.54356918568927,0,0,0,0,0,0,0.22237804384487,0.380451252225118,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81651769963376,2.93029216480508,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0.329098041204242,0.608929898229199,0.23467170806371,0.21183207086382,0,0,0,0,0,0,0,5.93360966433631,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,1.12950368523413,2.76195141904306,2.86447756719698,2.40594455281163,1.37016503954128,3.0215755895588,1.35004500046361,3.15224842256954,2.71885445390523,2.07104124700728,0.207574695168353,0.399024873401031,0,0.729320151204882,0.419226325255965,0.551530525350042,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.320125762024346,0.114870937911227,0,0.231768651889711,0,0.412085900803307,0.441596760403192,0,0.177475806159338,0.715308569841963,0.145346416632329,0.188218760830661,0.507687647350059,0.182927972872773,0,0.543216455383447,0,0.711810108745045,0.29551344712669,0,0.154936841185966,0,1.24905288968973,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p3@Rusc1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72296 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BG26 | |||
|association_with_transcript=0bp_to_ENSMUST00000052539,ENSMUST00000090929,NM_001083807,NM_028188,uc008pxm.1,uc008pxn.1_5end | |||
|cluster_id=chr3:88897280..88897289,- | |||
|description=CAGE_peak_3_at_Rusc1_5end | |||
|id=chr3:88897280..88897289,- | |||
|ontology_enrichment_celltype=CL:0000117!1.96e-21!23;CL:0000337!1.96e-21!23;CL:0000540!2.28e-14!33;CL:0000047!2.28e-14!33;CL:0000031!2.28e-14!33;CL:0000404!2.28e-14!33;CL:0000221!1.92e-11!44;CL:0000133!1.92e-11!44;CL:0002319!3.49e-11!43;CL:0000393!1.01e-10!39;CL:0000211!1.01e-10!39;CL:0000055!2.65e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.22e-38,23;CL:0000337,1.22e-38,23;CL:0000540,3.68e-25,33;CL:0000047,3.68e-25,33;CL:0000031,3.68e-25,33;CL:0000404,3.68e-25,33;CL:0000393,2.11e-20,39;CL:0000211,2.11e-20,39;CL:0002319,5.69e-18,43;CL:0000221,1.96e-17,44;CL:0000133,1.96e-17,44;CL:0002321,6.49e-09,70;CL:0002610,1.06e-07,3;CL:0002614,1.06e-07,3;CL:0002609,3.25e-07,6;CL:0002613,8.57e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.65e-31!52;UBERON:0005068!1.65e-31!52;UBERON:0006241!1.65e-31!52;UBERON:0007135!1.65e-31!52;UBERON:0002346!2.18e-30!71;UBERON:0003075!2.18e-30!71;UBERON:0007284!2.18e-30!71;UBERON:0001017!8.76e-30!73;UBERON:0005743!8.76e-30!73;UBERON:0000955!1.02e-29!50;UBERON:0006238!1.02e-29!50;UBERON:0000073!2.21e-29!75;UBERON:0001016!2.21e-29!75;UBERON:0002616!9.11e-29!49;UBERON:0002020!1.17e-28!34;UBERON:0004121!7.77e-26!102;UBERON:0000924!7.77e-26!102;UBERON:0006601!7.77e-26!102;UBERON:0000033!1.03e-25!63;UBERON:0003080!4.05e-24!40;UBERON:0002791!7.11e-24!29;UBERON:0003528!7.11e-24!29;UBERON:0001893!7.11e-24!29;UBERON:0002780!3.09e-23!39;UBERON:0001890!3.09e-23!39;UBERON:0006240!3.09e-23!39;UBERON:0003056!5.84e-22!49;UBERON:0000956!1.05e-16!21;UBERON:0001869!1.05e-16!21;UBERON:0000203!1.05e-16!21;UBERON:0007811!3.80e-14!86;UBERON:0002619!1.01e-13!17;UBERON:0000153!5.40e-13!94;UBERON:0002021!1.31e-09!10;UBERON:0000411!1.31e-09!10;UBERON:0001950!1.31e-09!10;UBERON:0002420!2.75e-08!8;UBERON:0007245!2.75e-08!8;UBERON:0010009!2.75e-08!8;UBERON:0010011!2.75e-08!8;UBERON:0000454!2.75e-08!8;UBERON:0003076!1.05e-07!12;UBERON:0003057!1.05e-07!12;UBERON:0002298!2.51e-07!6;UBERON:0002240!5.95e-07!6;UBERON:0005174!5.95e-07!6;UBERON:0001137!5.95e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.07e-49,54;UBERON:0001017,5.83e-46,73;UBERON:0002020,9.82e-46,34;UBERON:0001049,2.29e-45,52;UBERON:0005068,2.29e-45,52;UBERON:0006241,2.29e-45,52;UBERON:0007135,2.29e-45,52;UBERON:0001016,1.73e-44,75;UBERON:0003528,2.49e-36,29;UBERON:0002791,2.49e-36,29;UBERON:0001893,2.49e-36,29;UBERON:0000955,3.72e-36,47;UBERON:0006238,3.72e-36,47;UBERON:0002346,3.07e-35,64;UBERON:0003075,3.07e-35,64;UBERON:0007284,3.07e-35,64;UBERON:0002616,1.84e-34,46;UBERON:0004121,3.55e-33,95;UBERON:0000924,3.55e-33,95;UBERON:0006601,3.55e-33,95;UBERON:0003080,5.59e-32,40;UBERON:0002780,2.32e-30,39;UBERON:0001890,2.32e-30,39;UBERON:0006240,2.32e-30,39;UBERON:0010371,7.94e-30,73;UBERON:0000956,6.39e-25,21;UBERON:0001869,6.39e-25,21;UBERON:0000203,6.39e-25,21;UBERON:0003056,8.19e-25,49;UBERON:0010314,7.12e-22,92;UBERON:0002619,9.97e-22,17;UBERON:0002021,6.78e-18,10;UBERON:0000411,6.78e-18,10;UBERON:0001950,6.78e-18,10;UBERON:0000025,5.61e-16,114;UBERON:0004111,2.32e-14,122;UBERON:0003076,4.33e-13,12;UBERON:0003057,4.33e-13,12;UBERON:0002240,1.63e-12,6;UBERON:0005174,1.63e-12,6;UBERON:0001137,1.63e-12,6;UBERON:0002420,2.97e-12,8;UBERON:0007245,2.97e-12,8;UBERON:0010009,2.97e-12,8;UBERON:0010011,2.97e-12,8;UBERON:0000454,2.97e-12,8;UBERON:0011216,2.06e-11,194;UBERON:0001948,2.15e-10,5;UBERON:0002315,2.15e-10,5;UBERON:0002950,2.51e-09,4;UBERON:0001891,2.51e-09,4;UBERON:0009616,2.51e-09,4;UBERON:0010286,2.51e-09,4;UBERON:0002038,1.06e-07,3;UBERON:0009663,1.06e-07,3;UBERON:0009661,1.06e-07,3;UBERON:0000125,1.06e-07,3;UBERON:0002308,1.06e-07,3;UBERON:0004684,1.06e-07,3;UBERON:0002275,1.06e-07,3;UBERON:0000483,1.67e-07,174;UBERON:0000119,2.53e-07,176 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,1.82084814773638,3.70293685490423,1.90149421051854,0,0,0,0,0,0,0,1.8664130215526,0.945041568321835,1.47227472945967,3.14216082844184,2.87129103237098,1.10241719293459,1.53352753629178,1.83843757322004,4.40463523997555,3.57524546638526,4.14737639791857,2.2420668914133,2.19570344645783,4.16730696445408,6.42120897703176,3.93933827022176,3.20876320331301,1.47314292736834,2.56269025438385,3.91438836233131,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,2.34224637609238,0.209446706813455,0,0,0,0,2.39665023047716,0.457500602818626,1.25654352112864,2.25971616249959,3.3243009452943,2.70124457927428,2.43361894601636,0,0,0,0,0,0,0.360124259610698,0,0.544291993210623,0.2562274405697,0.187403449119458,0,0,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,1.54356918568927,0,0,0,0,0,0,0.22237804384487,0.380451252225118,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81651769963376,2.93029216480508,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0.329098041204242,0.608929898229199,0.23467170806371,0.21183207086382,0,0,0,0,0,0,0,5.93360966433631,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,1.12950368523413,2.76195141904306,2.86447756719698,2.40594455281163,1.37016503954128,3.0215755895588,1.35004500046361,3.15224842256954,2.71885445390523,2.07104124700728,0.207574695168353,0.399024873401031,0,0.729320151204882,0.419226325255965,0.551530525350042,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.320125762024346,0.114870937911227,0,0.231768651889711,0,0.412085900803307,0.441596760403192,0,0.177475806159338,0.715308569841963,0.145346416632329,0.188218760830661,0.507687647350059,0.182927972872773,0,0.543216455383447,0,0.711810108745045,0.29551344712669,0,0.154936841185966,0,1.24905288968973,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p3@Rusc1 | |||
}} |
Latest revision as of 20:16, 25 September 2015
Short description: | p3@Rusc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rusc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000052539, ENSMUST00000090929, NM_001083807, NM_028188, uc008pxm.1, uc008pxn.1_5end |
EntrezGene: | Rusc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.22e-38 | 23 |
neuroblast (sensu Vertebrata) | 1.22e-38 | 23 |
neuron | 3.68e-25 | 33 |
neuronal stem cell | 3.68e-25 | 33 |
neuroblast | 3.68e-25 | 33 |
electrically signaling cell | 3.68e-25 | 33 |
electrically responsive cell | 2.11e-20 | 39 |
electrically active cell | 2.11e-20 | 39 |
neural cell | 5.69e-18 | 43 |
ectodermal cell | 1.96e-17 | 44 |
neurectodermal cell | 1.96e-17 | 44 |
embryonic cell | 6.49e-09 | 70 |
raphe nuclei neuron | 1.06e-07 | 3 |
neuron of the substantia nigra | 1.06e-07 | 3 |
neuron of cerebral cortex | 3.25e-07 | 6 |
striatum neuron | 8.57e-07 | 3 |