FFCP PHASE1:Mm9::chr5:100845572..100845600,-: Difference between revisions
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{{FFCP|EntrezGene=69162|HGNC=|MCL_coexpression_id=1537|UniProt=Q3UPL0,E9Q9G9|association_with_transcript=-319bp_to_ENSMUST00000046296,ENSMUST00000094578,ENSMUST00000112918,NM_026969,uc008yhk.2_5end|description=CAGE_peak_5_at_Sec31a_5end|id=chr5:100845572..100845600,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,9.61e-17,6;CL:0000677,9.61e-17,6;CL:0000584,9.61e-17,6;CL:0000075,2.13e-14,7;CL:0002563,2.91e-11,9;CL:0002251,2.91e-11,9;CL:0002076,7.62e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000014!4.11e-07!5;UBERON:0001003!4.11e-07!5;UBERON:0002097!4.11e-07!5;UBERON:0002199!4.11e-07!5;UBERON:0007029!4.11e-07!5;UBERON:0007376!4.11e-07!5;UBERON:0002416!4.11e-07!5;UBERON:0007383!4.11e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.93e-31,5;UBERON:0001003,1.93e-31,5;UBERON:0002097,1.93e-31,5;UBERON:0002199,1.93e-31,5;UBERON:0007029,1.93e-31,5;UBERON:0007376,1.93e-31,5;UBERON:0002416,1.93e-31,5;UBERON:0007383,1.93e-31,5;UBERON:0003102,6.10e-18,22;UBERON:0003350,2.91e-11,9;UBERON:0004808,2.91e-11,9;UBERON:0001277,2.91e-11,9;UBERON:0000485,2.93e-09,11;UBERON:0001723,5.41e-08,1;UBERON:0001033,5.41e-08,1;UBERON:0010056,5.41e-08,1;UBERON:0000996,6.29e-08,1;UBERON:0001242,7.21e-08,13;UBERON:0001262,7.21e-08,13;UBERON:0004786,7.21e-08,13;UBERON:0000344,7.62e-07,15|phase1_expression=0,1.04692622291808,4.09499315450582,1.20985684522732,1.00179145989269,0.33575854382378,0,0.387369970324729,0.281577444303333,0,0,0,0.684802919724823,0.0874204024189974,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0.22940928106717,0.57423196411502,0.430761996159075,0,0.190023419456374,0.504060259519861,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,0,0.373220911830279,0.252722758433675,0,0,0,0.180062129805349,0,0,0,0,0,0,0.189106080167819,0,0,0.556094498451196,2.43776516565517,0.411564272815887,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.793351699990633,0,0,0,0,0,0,0.474529061544512,0.329397909448022,0.251335208800269,0,0.38992817423824,0,0,0.597423819763102,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48397627647332,2.26050197374268,1.44751019827574,1.43246812803764,1.80554989719567,0,0,0,0,0,0,0,0,0.339956859987711,0,0,0,0,0,0,1.88179466413022,1.31017538247707,0.944050424693745,0.578574190077352,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0.100826185136841,0,0,0,3.85441652145859,0,0,0,0,0.563047426353546,0,2.57242054894879,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0.972426868273176,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.192075457214608,0.17230640686684,0,0.231768651889711,0.38581844092741,0,0.588795680537589,0,0.354951612318675,0.476872379894642,0.145346416632329,0,0.0846146078916765,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.394017929502254,0,0.154936841185966,0.771626443924566,0.749431733813838,0,0.214871054048298,0.57386499620653,0,0|short_description=p5@Sec31a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69162 | |||
|HGNC= | |||
|MCL_coexpression_id=1537 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UPL0,E9Q9G9 | |||
|association_with_transcript=-319bp_to_ENSMUST00000046296,ENSMUST00000094578,ENSMUST00000112918,NM_026969,uc008yhk.2_5end | |||
|cluster_id=chr5:100845572..100845600,- | |||
|description=CAGE_peak_5_at_Sec31a_5end | |||
|id=chr5:100845572..100845600,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,9.61e-17,6;CL:0000677,9.61e-17,6;CL:0000584,9.61e-17,6;CL:0000075,2.13e-14,7;CL:0002563,2.91e-11,9;CL:0002251,2.91e-11,9;CL:0002076,7.62e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!4.11e-07!5;UBERON:0001003!4.11e-07!5;UBERON:0002097!4.11e-07!5;UBERON:0002199!4.11e-07!5;UBERON:0007029!4.11e-07!5;UBERON:0007376!4.11e-07!5;UBERON:0002416!4.11e-07!5;UBERON:0007383!4.11e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.93e-31,5;UBERON:0001003,1.93e-31,5;UBERON:0002097,1.93e-31,5;UBERON:0002199,1.93e-31,5;UBERON:0007029,1.93e-31,5;UBERON:0007376,1.93e-31,5;UBERON:0002416,1.93e-31,5;UBERON:0007383,1.93e-31,5;UBERON:0003102,6.10e-18,22;UBERON:0003350,2.91e-11,9;UBERON:0004808,2.91e-11,9;UBERON:0001277,2.91e-11,9;UBERON:0000485,2.93e-09,11;UBERON:0001723,5.41e-08,1;UBERON:0001033,5.41e-08,1;UBERON:0010056,5.41e-08,1;UBERON:0000996,6.29e-08,1;UBERON:0001242,7.21e-08,13;UBERON:0001262,7.21e-08,13;UBERON:0004786,7.21e-08,13;UBERON:0000344,7.62e-07,15 | |||
|phase1_expression=0,1.04692622291808,4.09499315450582,1.20985684522732,1.00179145989269,0.33575854382378,0,0.387369970324729,0.281577444303333,0,0,0,0.684802919724823,0.0874204024189974,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0.22940928106717,0.57423196411502,0.430761996159075,0,0.190023419456374,0.504060259519861,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,0,0.373220911830279,0.252722758433675,0,0,0,0.180062129805349,0,0,0,0,0,0,0.189106080167819,0,0,0.556094498451196,2.43776516565517,0.411564272815887,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.793351699990633,0,0,0,0,0,0,0.474529061544512,0.329397909448022,0.251335208800269,0,0.38992817423824,0,0,0.597423819763102,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48397627647332,2.26050197374268,1.44751019827574,1.43246812803764,1.80554989719567,0,0,0,0,0,0,0,0,0.339956859987711,0,0,0,0,0,0,1.88179466413022,1.31017538247707,0.944050424693745,0.578574190077352,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0.100826185136841,0,0,0,3.85441652145859,0,0,0,0,0.563047426353546,0,2.57242054894879,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0.972426868273176,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.192075457214608,0.17230640686684,0,0.231768651889711,0.38581844092741,0,0.588795680537589,0,0.354951612318675,0.476872379894642,0.145346416632329,0,0.0846146078916765,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.394017929502254,0,0.154936841185966,0.771626443924566,0.749431733813838,0,0.214871054048298,0.57386499620653,0,0 | |||
|short_description=p5@Sec31a | |||
}} |
Latest revision as of 11:36, 1 October 2015
Short description: | p5@Sec31a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Sec31a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1537 |
Association with transcript: | -319bp_to_ENSMUST00000046296, ENSMUST00000094578, ENSMUST00000112918, NM_026969, uc008yhk.2_5end |
EntrezGene: | Sec31a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 9.61e-17 | 6 |
gut absorptive cell | 9.61e-17 | 6 |
enterocyte | 9.61e-17 | 6 |
columnar/cuboidal epithelial cell | 2.13e-14 | 7 |
intestinal epithelial cell | 2.91e-11 | 9 |
epithelial cell of alimentary canal | 2.91e-11 | 9 |
endo-epithelial cell | 7.62e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 1.93e-31 | 5 |
skin epidermis | 1.93e-31 | 5 |
skin of body | 1.93e-31 | 5 |
integument | 1.93e-31 | 5 |
surface | 1.93e-31 | 5 |
outer epithelium | 1.93e-31 | 5 |
integumental system | 1.93e-31 | 5 |
enveloping layer of ectoderm | 1.93e-31 | 5 |
surface structure | 6.10e-18 | 22 |
epithelium of mucosa | 2.91e-11 | 9 |
gastrointestinal system epithelium | 2.91e-11 | 9 |
intestinal epithelium | 2.91e-11 | 9 |
simple columnar epithelium | 2.93e-09 | 11 |
tongue | 5.41e-08 | 1 |
gustatory system | 5.41e-08 | 1 |
future tongue | 5.41e-08 | 1 |
vagina | 6.29e-08 | 1 |
intestinal mucosa | 7.21e-08 | 13 |
wall of intestine | 7.21e-08 | 13 |
gastrointestinal system mucosa | 7.21e-08 | 13 |
mucosa | 7.62e-07 | 15 |